; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi06G015420 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G015420
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionSpermidine synthase
Genome locationchr06:25771974..25779002
RNA-Seq ExpressionLsi06G015420
SyntenyLsi06G015420
Gene Ontology termsGO:0006596 - polyamine biosynthetic process (biological process)
GO:0016740 - transferase activity (molecular function)
InterPro domainsIPR001045 - Spermidine/spermine synthases
IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase
IPR030373 - Polyamine biosynthesis domain, conserved site
IPR030374 - Polyamine biosynthesis domain
IPR035246 - Spermidine synthase, tetramerisation domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011657853.1 spermidine synthase 2 isoform X1 [Cucumis sativus]4.9e-13876.32Show/hide
Query:  MAMDANGVLSFSDDLVFKQKKDEVF--NNGCSHQHVAV-------ENQKEEEEDDSI---NSDALNHPTIPGWFSEHCPQWPGQAHFLKVDKVLFQGKSD
        MAMDANGVLSFSDDLVFKQKKDEV   NNGCS  HV V       ++++EEEED+SI     D LN+PTIPGWFSEHCPQWPGQAHFLKVDKVLFQG S 
Subjt:  MAMDANGVLSFSDDLVFKQKKDEVF--NNGCSHQHVAV-------ENQKEEEEDDSI---NSDALNHPTIPGWFSEHCPQWPGQAHFLKVDKVLFQGKSD

Query:  YQSMLVFQSSAYG-----------------------------------KVLLIGGGDGGILREISRHSSIEQIDICEIDTMLIDVYKKYFPEIAVGYKDS
        YQSMLVFQ+SAYG                                   KVL+IGGGDGGILREISRHSSIE IDICEIDTMLIDVYKKYFPEIAVGYKD 
Subjt:  YQSMLVFQSSAYG-----------------------------------KVLLIGGGDGGILREISRHSSIEQIDICEIDTMLIDVYKKYFPEIAVGYKDS

Query:  RVNLHIIDGTAFLSSVPAGTYDAIIVDAFDPIKPDDEVVRSSLFEKVAKALRDGGVLCIQAESLWFHSLDIEILISKCQQVFKGSVQYAWTIVPTYPSGV
        RVNLHIIDG  FLSSVP G+YDAIIVDAFDPIKPDDEV+RS LFEKVAKAL++GGVLCIQAESLWFHSLDI+ILISKC+QVFKGSVQYAWTIVP YPSGV
Subjt:  RVNLHIIDGTAFLSSVPAGTYDAIIVDAFDPIKPDDEVVRSSLFEKVAKALRDGGVLCIQAESLWFHSLDIEILISKCQQVFKGSVQYAWTIVPTYPSGV

Query:  IGFLLCSTQGPK-VDFKNPINPIDPNENFGVATKPLKFYNSE
        IGFLLCSTQGPK VDFKNPINPID N NFGVAT+PLKFYNSE
Subjt:  IGFLLCSTQGPK-VDFKNPINPIDPNENFGVATKPLKFYNSE

XP_022921767.1 spermidine synthase 1-like [Cucurbita moschata]2.9e-13876.6Show/hide
Query:  MAMDANGVLSFSDDLVFKQKKDEVFNNGCSHQHVAVENQKEEEEDDSINSDALNHPTIPGWFSEHCPQWPGQAHFLKVDKVLFQGKSDYQSMLVFQSSAY
        MAM+ANGV+SF+D L+FKQ+K+E FNNG SH H+AV    E+ EDDSIN   L+HP+IPGWFSEHCPQWPGQAHFLKVDKVLFQGKSDYQSMLVFQS+AY
Subjt:  MAMDANGVLSFSDDLVFKQKKDEVFNNGCSHQHVAVENQKEEEEDDSINSDALNHPTIPGWFSEHCPQWPGQAHFLKVDKVLFQGKSDYQSMLVFQSSAY

Query:  G-----------------------------------KVLLIGGGDGGILREISRHSSIEQIDICEIDTMLIDVYKKYFPEIAVGYKDSRVNLHIIDGTAF
        G                                   KVL+IGGGDGGILREISRHSSI+QIDICEIDTMLIDVYKK+FPEIAVGYKDSRVN+HIIDG AF
Subjt:  G-----------------------------------KVLLIGGGDGGILREISRHSSIEQIDICEIDTMLIDVYKKYFPEIAVGYKDSRVNLHIIDGTAF

Query:  LSSVPAGTYDAIIVDAFDPIKPDDEVVRSSLFEKVAKALRDGGVLCIQAESLWFHSLDIEILISKCQQVFKGSVQYAWTIVPTYPSGVIGFLLCSTQGPK
        L+SV  GTYDAIIVDAFDPIKPDDEVVRS LFE VA+ALR GGVLCIQAESLWFH LDI+ LISKC QVFKGSVQYAWTIVP YPSGVIGFLLCSTQGPK
Subjt:  LSSVPAGTYDAIIVDAFDPIKPDDEVVRSSLFEKVAKALRDGGVLCIQAESLWFHSLDIEILISKCQQVFKGSVQYAWTIVPTYPSGVIGFLLCSTQGPK

Query:  VDFKNPINPIDPNENFGVATKPLKFYNSE
        VDFKNPINPID N NFGVATKPLKFYNSE
Subjt:  VDFKNPINPIDPNENFGVATKPLKFYNSE

XP_022988394.1 spermidine synthase 1-like [Cucurbita maxima]2.9e-13876.29Show/hide
Query:  MAMDANGVLSFSDDLVFKQKKDEVFNNGCSHQHVAVENQKEEEEDDSINSDALNHPTIPGWFSEHCPQWPGQAHFLKVDKVLFQGKSDYQSMLVFQSSAY
        MAM+ANGV+SF+D L+FKQ+K+E FNNG SH H+AV    E+ EDDSIN   LNHP+IPGWFSEHCPQWPGQAHFLKVDKVLFQGKSDYQSMLVFQS+AY
Subjt:  MAMDANGVLSFSDDLVFKQKKDEVFNNGCSHQHVAVENQKEEEEDDSINSDALNHPTIPGWFSEHCPQWPGQAHFLKVDKVLFQGKSDYQSMLVFQSSAY

Query:  G-----------------------------------KVLLIGGGDGGILREISRHSSIEQIDICEIDTMLIDVYKKYFPEIAVGYKDSRVNLHIIDGTAF
        G                                   KVL+IGGGDGGILREISRHSSI+QIDICEIDTMLI+VYKK+FPEIAVGYKDSRVN+HIIDG AF
Subjt:  G-----------------------------------KVLLIGGGDGGILREISRHSSIEQIDICEIDTMLIDVYKKYFPEIAVGYKDSRVNLHIIDGTAF

Query:  LSSVPAGTYDAIIVDAFDPIKPDDEVVRSSLFEKVAKALRDGGVLCIQAESLWFHSLDIEILISKCQQVFKGSVQYAWTIVPTYPSGVIGFLLCSTQGPK
        L+SV  GTYDAIIVDAFDPIKPDDEVVRS LFE V KALR GGVLCIQAESLWFH LDI+ LISKC QVFKGSVQYAWTIVP YPSGVIGFLLCST+GPK
Subjt:  LSSVPAGTYDAIIVDAFDPIKPDDEVVRSSLFEKVAKALRDGGVLCIQAESLWFHSLDIEILISKCQQVFKGSVQYAWTIVPTYPSGVIGFLLCSTQGPK

Query:  VDFKNPINPIDPNENFGVATKPLKFYNSE
        VDFKNPINPID N+NFGVATKPLKFYNSE
Subjt:  VDFKNPINPIDPNENFGVATKPLKFYNSE

XP_038879914.1 spermidine synthase 2-like isoform X1 [Benincasa hispida]6.6e-14368.84Show/hide
Query:  MAMDANGVLSFSDDLVFKQKKDEVFNNGCSHQ-----------------------------------------------------------------HVA
        MAMDANGVLSFSDDLVFKQKK+EVFNNGCSH                                                                  HV 
Subjt:  MAMDANGVLSFSDDLVFKQKKDEVFNNGCSHQ-----------------------------------------------------------------HVA

Query:  VENQKEEEEDDSI----NSDALNHPTIPGWFSEHCPQWPGQAHFLKVDKVLFQGKSDYQSMLVFQSSAYG------------------------------
           +K++EEDDSI    ++DALNHPTIPGWFSEHCPQWPGQAHFLKVDKVLFQGKSDYQSMLVFQSSAYG                              
Subjt:  VENQKEEEEDDSI----NSDALNHPTIPGWFSEHCPQWPGQAHFLKVDKVLFQGKSDYQSMLVFQSSAYG------------------------------

Query:  -----KVLLIGGGDGGILREISRHSSIEQIDICEIDTMLIDVYKKYFPEIAVGYKDSRVNLHIIDGTAFLSSVPAGTYDAIIVDAFDPIKPDDEVVRSSL
             KVLLIGGGDGGILREISRHSSIEQIDICEIDTMLIDVYKKYFPEIAVGYKD RVNLHIIDG AFL+SVPAGTYDAIIVDAFDPIKPDDEVV++ L
Subjt:  -----KVLLIGGGDGGILREISRHSSIEQIDICEIDTMLIDVYKKYFPEIAVGYKDSRVNLHIIDGTAFLSSVPAGTYDAIIVDAFDPIKPDDEVVRSSL

Query:  FEKVAKALRDGGVLCIQAESLWFHSLDIEILISKCQQVFKGSVQYAWTIVPTYPSGVIGFLLCSTQGPKVDFKNPINPIDPNENFGVATKPLKFYNSE
        FEKVAKALRDGGVLCIQAESLWFHSLDIEIL+SKCQQVFKGSVQYAWTIVPTYPSGVIGFLLCSTQGPKVDFKNPIN ID NENFGVATKPLKFYNSE
Subjt:  FEKVAKALRDGGVLCIQAESLWFHSLDIEILISKCQQVFKGSVQYAWTIVPTYPSGVIGFLLCSTQGPKVDFKNPINPIDPNENFGVATKPLKFYNSE

XP_038879915.1 spermidine synthase 2-like isoform X2 [Benincasa hispida]1.9e-14573.99Show/hide
Query:  MAMDANGVLSFSDDLVFKQKKDEVFNNGCSHQ-HV-AVENQKEEEEDDSI------------------------------------------NSDALNHP
        MAMDANGVLSFSDDLVFKQKK+EVFNNGCSH  HV +VE+Q  +EEDDSI                                          ++DALNHP
Subjt:  MAMDANGVLSFSDDLVFKQKKDEVFNNGCSHQ-HV-AVENQKEEEEDDSI------------------------------------------NSDALNHP

Query:  TIPGWFSEHCPQWPGQAHFLKVDKVLFQGKSDYQSMLVFQSSAYG-----------------------------------KVLLIGGGDGGILREISRHS
        TIPGWFSEHCPQWPGQAHFLKVDKVLFQGKSDYQSMLVFQSSAYG                                   KVLLIGGGDGGILREISRHS
Subjt:  TIPGWFSEHCPQWPGQAHFLKVDKVLFQGKSDYQSMLVFQSSAYG-----------------------------------KVLLIGGGDGGILREISRHS

Query:  SIEQIDICEIDTMLIDVYKKYFPEIAVGYKDSRVNLHIIDGTAFLSSVPAGTYDAIIVDAFDPIKPDDEVVRSSLFEKVAKALRDGGVLCIQAESLWFHS
        SIEQIDICEIDTMLIDVYKKYFPEIAVGYKD RVNLHIIDG AFL+SVPAGTYDAIIVDAFDPIKPDDEVV++ LFEKVAKALRDGGVLCIQAESLWFHS
Subjt:  SIEQIDICEIDTMLIDVYKKYFPEIAVGYKDSRVNLHIIDGTAFLSSVPAGTYDAIIVDAFDPIKPDDEVVRSSLFEKVAKALRDGGVLCIQAESLWFHS

Query:  LDIEILISKCQQVFKGSVQYAWTIVPTYPSGVIGFLLCSTQGPKVDFKNPINPIDPNENFGVATKPLKFYNSE
        LDIEIL+SKCQQVFKGSVQYAWTIVPTYPSGVIGFLLCSTQGPKVDFKNPIN ID NENFGVATKPLKFYNSE
Subjt:  LDIEILISKCQQVFKGSVQYAWTIVPTYPSGVIGFLLCSTQGPKVDFKNPINPIDPNENFGVATKPLKFYNSE

TrEMBL top hitse value%identityAlignment
A0A0A0LP68 PABS domain-containing protein2.6e-13776.18Show/hide
Query:  MDANGVLSFSDDLVFKQKKDEVF--NNGCSHQHVAV-------ENQKEEEEDDSI---NSDALNHPTIPGWFSEHCPQWPGQAHFLKVDKVLFQGKSDYQ
        MDANGVLSFSDDLVFKQKKDEV   NNGCS  HV V       ++++EEEED+SI     D LN+PTIPGWFSEHCPQWPGQAHFLKVDKVLFQG S YQ
Subjt:  MDANGVLSFSDDLVFKQKKDEVF--NNGCSHQHVAV-------ENQKEEEEDDSI---NSDALNHPTIPGWFSEHCPQWPGQAHFLKVDKVLFQGKSDYQ

Query:  SMLVFQSSAYG-----------------------------------KVLLIGGGDGGILREISRHSSIEQIDICEIDTMLIDVYKKYFPEIAVGYKDSRV
        SMLVFQ+SAYG                                   KVL+IGGGDGGILREISRHSSIE IDICEIDTMLIDVYKKYFPEIAVGYKD RV
Subjt:  SMLVFQSSAYG-----------------------------------KVLLIGGGDGGILREISRHSSIEQIDICEIDTMLIDVYKKYFPEIAVGYKDSRV

Query:  NLHIIDGTAFLSSVPAGTYDAIIVDAFDPIKPDDEVVRSSLFEKVAKALRDGGVLCIQAESLWFHSLDIEILISKCQQVFKGSVQYAWTIVPTYPSGVIG
        NLHIIDG  FLSSVP G+YDAIIVDAFDPIKPDDEV+RS LFEKVAKAL++GGVLCIQAESLWFHSLDI+ILISKC+QVFKGSVQYAWTIVP YPSGVIG
Subjt:  NLHIIDGTAFLSSVPAGTYDAIIVDAFDPIKPDDEVVRSSLFEKVAKALRDGGVLCIQAESLWFHSLDIEILISKCQQVFKGSVQYAWTIVPTYPSGVIG

Query:  FLLCSTQGPK-VDFKNPINPIDPNENFGVATKPLKFYNSE
        FLLCSTQGPK VDFKNPINPID N NFGVAT+PLKFYNSE
Subjt:  FLLCSTQGPK-VDFKNPINPIDPNENFGVATKPLKFYNSE

A0A1S3BVF4 spermidine synthase 2-like isoform X13.4e-13775.07Show/hide
Query:  MDANGVLSFSDDLVFKQKKDEVFN----NGCSHQHVA----------VENQKEEEEDDSI---NSDALNHPTIPGWFSEHCPQWPGQAHFLKVDKVLFQG
        MDANGVLSFSDDLVFK+KKDEV N    NGCSH  V            E ++EEEED+SI     D L+HPTIPGWF EHCPQWPGQAHFLKVDKVLFQG
Subjt:  MDANGVLSFSDDLVFKQKKDEVFN----NGCSHQHVA----------VENQKEEEEDDSI---NSDALNHPTIPGWFSEHCPQWPGQAHFLKVDKVLFQG

Query:  KSDYQSMLVFQSSAYG-----------------------------------KVLLIGGGDGGILREISRHSSIEQIDICEIDTMLIDVYKKYFPEIAVGY
        KS YQ+MLVFQSSAYG                                   KVL+IGGGDGGILREISRHSSIEQIDICEIDTMLIDVYKKYFPEIAVGY
Subjt:  KSDYQSMLVFQSSAYG-----------------------------------KVLLIGGGDGGILREISRHSSIEQIDICEIDTMLIDVYKKYFPEIAVGY

Query:  KDSRVNLHIIDGTAFLSSVPAGTYDAIIVDAFDPIKPDDEVVRSSLFEKVAKALRDGGVLCIQAESLWFHSLDIEILISKCQQVFKGSVQYAWTIVPTYP
        KD RVNLHIIDG+AFLSSVP G+YDAIIVDAFDPIKPDDEVVRS LFE VAKAL++GGVLCIQAESLWF SLDI+ILISKC+QVFKGSVQYAWTIVP YP
Subjt:  KDSRVNLHIIDGTAFLSSVPAGTYDAIIVDAFDPIKPDDEVVRSSLFEKVAKALRDGGVLCIQAESLWFHSLDIEILISKCQQVFKGSVQYAWTIVPTYP

Query:  SGVIGFLLCSTQGPK-VDFKNPINPIDPNENFGVATKPLKFYNSE
        SGVIGFLLCSTQGPK VDFKNPINPID N+NFGVAT+PLKFYNSE
Subjt:  SGVIGFLLCSTQGPK-VDFKNPINPIDPNENFGVATKPLKFYNSE

A0A5A7UWC7 Spermidine synthase 2-like isoform X12.1e-13474.28Show/hide
Query:  MDANGVLSFSDDLVFKQKKDEVFN----NGCSHQHVA----------VENQKEEEEDDSI---NSDALNHPTIPGWFSEHCPQWPGQAHFLKVDKVLFQG
        MDANGVLSFSDDLVFK+KKDEV N    NGCSH  V            E ++EEEED+SI     D L+HPTIPGWF EHCPQWPGQAHFLKVDKVLFQG
Subjt:  MDANGVLSFSDDLVFKQKKDEVFN----NGCSHQHVA----------VENQKEEEEDDSI---NSDALNHPTIPGWFSEHCPQWPGQAHFLKVDKVLFQG

Query:  KSDYQSMLVFQSSAYG-----------------------------------KVLLIGGGDGGILREISRHSSIEQIDICEIDTMLIDVYKKYFPEIAVGY
        KS YQ+ML   SSAYG                                   KVL+IGGGDGGILREISRHSSIEQIDICEIDTMLIDVYKKYFPEIAVGY
Subjt:  KSDYQSMLVFQSSAYG-----------------------------------KVLLIGGGDGGILREISRHSSIEQIDICEIDTMLIDVYKKYFPEIAVGY

Query:  KDSRVNLHIIDGTAFLSSVPAGTYDAIIVDAFDPIKPDDEVVRSSLFEKVAKALRDGGVLCIQAESLWFHSLDIEILISKCQQVFKGSVQYAWTIVPTYP
        KD RVNLHIIDG+AFLSSVP G+YDAIIVDAFDPIKPDDEVVRS LFE VAKAL++GGVLCIQAESLWF SLDI+ILISKC+QVFKGSVQYAWTIVP YP
Subjt:  KDSRVNLHIIDGTAFLSSVPAGTYDAIIVDAFDPIKPDDEVVRSSLFEKVAKALRDGGVLCIQAESLWFHSLDIEILISKCQQVFKGSVQYAWTIVPTYP

Query:  SGVIGFLLCSTQGPK-VDFKNPINPIDPNENFGVATKPLKFYNSEA
        SGVIGFLLCSTQGPK VDFKNPINPID N+NFGVAT+PLKFYNSEA
Subjt:  SGVIGFLLCSTQGPK-VDFKNPINPIDPNENFGVATKPLKFYNSEA

A0A6J1E1D2 spermidine synthase 1-like1.4e-13876.6Show/hide
Query:  MAMDANGVLSFSDDLVFKQKKDEVFNNGCSHQHVAVENQKEEEEDDSINSDALNHPTIPGWFSEHCPQWPGQAHFLKVDKVLFQGKSDYQSMLVFQSSAY
        MAM+ANGV+SF+D L+FKQ+K+E FNNG SH H+AV    E+ EDDSIN   L+HP+IPGWFSEHCPQWPGQAHFLKVDKVLFQGKSDYQSMLVFQS+AY
Subjt:  MAMDANGVLSFSDDLVFKQKKDEVFNNGCSHQHVAVENQKEEEEDDSINSDALNHPTIPGWFSEHCPQWPGQAHFLKVDKVLFQGKSDYQSMLVFQSSAY

Query:  G-----------------------------------KVLLIGGGDGGILREISRHSSIEQIDICEIDTMLIDVYKKYFPEIAVGYKDSRVNLHIIDGTAF
        G                                   KVL+IGGGDGGILREISRHSSI+QIDICEIDTMLIDVYKK+FPEIAVGYKDSRVN+HIIDG AF
Subjt:  G-----------------------------------KVLLIGGGDGGILREISRHSSIEQIDICEIDTMLIDVYKKYFPEIAVGYKDSRVNLHIIDGTAF

Query:  LSSVPAGTYDAIIVDAFDPIKPDDEVVRSSLFEKVAKALRDGGVLCIQAESLWFHSLDIEILISKCQQVFKGSVQYAWTIVPTYPSGVIGFLLCSTQGPK
        L+SV  GTYDAIIVDAFDPIKPDDEVVRS LFE VA+ALR GGVLCIQAESLWFH LDI+ LISKC QVFKGSVQYAWTIVP YPSGVIGFLLCSTQGPK
Subjt:  LSSVPAGTYDAIIVDAFDPIKPDDEVVRSSLFEKVAKALRDGGVLCIQAESLWFHSLDIEILISKCQQVFKGSVQYAWTIVPTYPSGVIGFLLCSTQGPK

Query:  VDFKNPINPIDPNENFGVATKPLKFYNSE
        VDFKNPINPID N NFGVATKPLKFYNSE
Subjt:  VDFKNPINPIDPNENFGVATKPLKFYNSE

A0A6J1JLE9 spermidine synthase 1-like1.4e-13876.29Show/hide
Query:  MAMDANGVLSFSDDLVFKQKKDEVFNNGCSHQHVAVENQKEEEEDDSINSDALNHPTIPGWFSEHCPQWPGQAHFLKVDKVLFQGKSDYQSMLVFQSSAY
        MAM+ANGV+SF+D L+FKQ+K+E FNNG SH H+AV    E+ EDDSIN   LNHP+IPGWFSEHCPQWPGQAHFLKVDKVLFQGKSDYQSMLVFQS+AY
Subjt:  MAMDANGVLSFSDDLVFKQKKDEVFNNGCSHQHVAVENQKEEEEDDSINSDALNHPTIPGWFSEHCPQWPGQAHFLKVDKVLFQGKSDYQSMLVFQSSAY

Query:  G-----------------------------------KVLLIGGGDGGILREISRHSSIEQIDICEIDTMLIDVYKKYFPEIAVGYKDSRVNLHIIDGTAF
        G                                   KVL+IGGGDGGILREISRHSSI+QIDICEIDTMLI+VYKK+FPEIAVGYKDSRVN+HIIDG AF
Subjt:  G-----------------------------------KVLLIGGGDGGILREISRHSSIEQIDICEIDTMLIDVYKKYFPEIAVGYKDSRVNLHIIDGTAF

Query:  LSSVPAGTYDAIIVDAFDPIKPDDEVVRSSLFEKVAKALRDGGVLCIQAESLWFHSLDIEILISKCQQVFKGSVQYAWTIVPTYPSGVIGFLLCSTQGPK
        L+SV  GTYDAIIVDAFDPIKPDDEVVRS LFE V KALR GGVLCIQAESLWFH LDI+ LISKC QVFKGSVQYAWTIVP YPSGVIGFLLCST+GPK
Subjt:  LSSVPAGTYDAIIVDAFDPIKPDDEVVRSSLFEKVAKALRDGGVLCIQAESLWFHSLDIEILISKCQQVFKGSVQYAWTIVPTYPSGVIGFLLCSTQGPK

Query:  VDFKNPINPIDPNENFGVATKPLKFYNSE
        VDFKNPINPID N+NFGVATKPLKFYNSE
Subjt:  VDFKNPINPIDPNENFGVATKPLKFYNSE

SwissProt top hitse value%identityAlignment
O48658 Spermidine synthase 12.7e-9155.26Show/hide
Query:  NNGCSHQHVAVENQKEEEEDDSINSDALNHPTIPGWFSEHCPQWPGQAHFLKVDKVLFQGKSDYQSMLVFQSSAYG------------------------
        +NGCS+      N+KE     S+         +PGWFSE  P WPG+AH LKV+K+LFQGKSDYQ+++VFQSS YG                        
Subjt:  NNGCSHQHVAVENQKEEEEDDSINSDALNHPTIPGWFSEHCPQWPGQAHFLKVDKVLFQGKSDYQSMLVFQSSAYG------------------------

Query:  -----------KVLLIGGGDGGILREISRHSSIEQIDICEIDTMLIDVYKKYFPEIAVGYKDSRVNLHIIDGTAFLSSVPAGTYDAIIVDAFDPIKPDDE
                   KVL+IGGGDGG+LRE+SRHSS+EQIDICEID M+++V K++FP++AVGY+D RVNLHI DG AFL +VPAGTYDA+IVD+ DPI P  E
Subjt:  -----------KVLLIGGGDGGILREISRHSSIEQIDICEIDTMLIDVYKKYFPEIAVGYKDSRVNLHIIDGTAFLSSVPAGTYDAIIVDAFDPIKPDDE

Query:  VVRSSLFEKVAKALRDGGVLCIQAESLWFHSLDIEILISKCQQVFKGSVQYAWTIVPTYPSGVIGFLLCSTQGPKVDFKNPINPIDPNENFGVATKPLKF
        +     FE +A+ALR GGV+  QAES+W H   IE +++ C+Q+FKGSV YAWT VPTYPSG+IGF+LCST+GP VDFKNPINPID +E+      PLKF
Subjt:  VVRSSLFEKVAKALRDGGVLCIQAESLWFHSLDIEILISKCQQVFKGSVQYAWTIVPTYPSGVIGFLLCSTQGPKVDFKNPINPIDPNENFGVATKPLKF

Query:  YNSE
        YNSE
Subjt:  YNSE

O48659 Spermidine synthase 22.5e-9256.99Show/hide
Query:  EDDSINSDALNHPTIPGWFSEHCPQWPGQAHFLKVDKVLFQGKSDYQSMLVFQSSAYG-----------------------------------KVLLIGG
        E+   N  A     +PGWFSE  P WPG+AH LKV+K+LFQGKSDYQ+++VFQSS YG                                   KVL+IGG
Subjt:  EDDSINSDALNHPTIPGWFSEHCPQWPGQAHFLKVDKVLFQGKSDYQSMLVFQSSAYG-----------------------------------KVLLIGG

Query:  GDGGILREISRHSSIEQIDICEIDTMLIDVYKKYFPEIAVGYKDSRVNLHIIDGTAFLSSVPAGTYDAIIVDAFDPIKPDDEVVRSSLFEKVAKALRDGG
        GDGG+LRE+SRHSS+EQIDICEID M+IDV K++FP +A+GY+D RV LH+ DG AFL +VP GTYDA+IVD+ DPI P  E+     FE VA+AL  GG
Subjt:  GDGGILREISRHSSIEQIDICEIDTMLIDVYKKYFPEIAVGYKDSRVNLHIIDGTAFLSSVPAGTYDAIIVDAFDPIKPDDEVVRSSLFEKVAKALRDGG

Query:  VLCIQAESLWFHSLDIEILISKCQQVFKGSVQYAWTIVPTYPSGVIGFLLCSTQGPKVDFKNPINPIDPNENFGVATKPLKFYNSE
        V+C QAES+W H   IE ++S C+Q+FKGSV YAWT VPTYPSGVIGF+LCST+GP VDFKNPINPID +++      PLKFYNSE
Subjt:  VLCIQAESLWFHSLDIEILISKCQQVFKGSVQYAWTIVPTYPSGVIGFLLCSTQGPKVDFKNPINPIDPNENFGVATKPLKFYNSE

O82147 Spermidine synthase3.2e-9257.14Show/hide
Query:  NQKEE--EEDDSINSDALNHPTIPGWFSEHCPQWPGQAHFLKVDKVLFQGKSDYQSMLVFQSSAYG----------------------------------
        N KEE  +  D ++S       IPGWFSE  P WPG+AH LKV+K+LFQGKSDYQ+++VFQSS YG                                  
Subjt:  NQKEE--EEDDSINSDALNHPTIPGWFSEHCPQWPGQAHFLKVDKVLFQGKSDYQSMLVFQSSAYG----------------------------------

Query:  -KVLLIGGGDGGILREISRHSSIEQIDICEIDTMLIDVYKKYFPEIAVGYKDSRVNLHIIDGTAFLSSVPAGTYDAIIVDAFDPIKPDDEVVRSSLFEKV
         KVL+IGGGDGG+LRE++RH S+EQIDICEID M++DV K++FP++AVG++D RV LHI DG AFL +VP GTYDAIIVD+ DPI P  E+     FE V
Subjt:  -KVLLIGGGDGGILREISRHSSIEQIDICEIDTMLIDVYKKYFPEIAVGYKDSRVNLHIIDGTAFLSSVPAGTYDAIIVDAFDPIKPDDEVVRSSLFEKV

Query:  AKALRDGGVLCIQAESLWFHSLDIEILISKCQQVFKGSVQYAWTIVPTYPSGVIGFLLCSTQGPKVDFKNPINPIDPNENFGVATKPLKFYNSE
        AKALR GGV+C QAES+W H   IE +++ C+Q+FKGSV YAWT VPTYPSGVIGF+LCST+GP VDFK+PINPID N+      KPLKFYNSE
Subjt:  AKALRDGGVLCIQAESLWFHSLDIEILISKCQQVFKGSVQYAWTIVPTYPSGVIGFLLCSTQGPKVDFKNPINPIDPNENFGVATKPLKFYNSE

Q96557 Spermidine synthase 22.7e-9154.61Show/hide
Query:  NNGCSHQHVAVENQKEEEEDDSINSDALNHPTIPGWFSEHCPQWPGQAHFLKVDKVLFQGKSDYQSMLVFQSSAYG------------------------
        NNGC++          ++E   I+S       +PGWFSE  P WPG+AH LKV+K+LFQGKSDYQ ++VFQS+ YG                        
Subjt:  NNGCSHQHVAVENQKEEEEDDSINSDALNHPTIPGWFSEHCPQWPGQAHFLKVDKVLFQGKSDYQSMLVFQSSAYG------------------------

Query:  -----------KVLLIGGGDGGILREISRHSSIEQIDICEIDTMLIDVYKKYFPEIAVGYKDSRVNLHIIDGTAFLSSVPAGTYDAIIVDAFDPIKPDDE
                   KVL+IGGGDGG+LRE+SRHSS+EQIDICEID M+++V K++FP++AVGY+D RVNLHI DG AFL +VPAGTYDA+IVD+ DPI P  E
Subjt:  -----------KVLLIGGGDGGILREISRHSSIEQIDICEIDTMLIDVYKKYFPEIAVGYKDSRVNLHIIDGTAFLSSVPAGTYDAIIVDAFDPIKPDDE

Query:  VVRSSLFEKVAKALRDGGVLCIQAESLWFHSLDIEILISKCQQVFKGSVQYAWTIVPTYPSGVIGFLLCSTQGPKVDFKNPINPIDPNENFGVATKPLKF
        +     FE +A+ALR GGV+  QAES+W H   IE +++ C+++FKGSV YAWT VPTYPSG+IGF+LCST+GP VDFKNPINPID +E+ G    PLKF
Subjt:  VVRSSLFEKVAKALRDGGVLCIQAESLWFHSLDIEILISKCQQVFKGSVQYAWTIVPTYPSGVIGFLLCSTQGPKVDFKNPINPIDPNENFGVATKPLKF

Query:  YNSE
        YNSE
Subjt:  YNSE

Q9ZS45 Spermidine synthase2.5e-9255.92Show/hide
Query:  NNGCSHQHVAVENQKEEEEDDSINSDALNHPTIPGWFSEHCPQWPGQAHFLKVDKVLFQGKSDYQSMLVFQSSAYG------------------------
        NNGC          ++EE    I+S       +PGWFSE  P WPG+AH LKV+K+LFQGKSDYQ++LVFQSS YG                        
Subjt:  NNGCSHQHVAVENQKEEEEDDSINSDALNHPTIPGWFSEHCPQWPGQAHFLKVDKVLFQGKSDYQSMLVFQSSAYG------------------------

Query:  -----------KVLLIGGGDGGILREISRHSSIEQIDICEIDTMLIDVYKKYFPEIAVGYKDSRVNLHIIDGTAFLSSVPAGTYDAIIVDAFDPIKPDDE
                   KVL+IGGGDGG+LRE+SRHSS+EQIDICEID M+++V K++FP++AVGY+D RVNLHI DG AFL +VPAGTYDA+IVD+ DPI P  E
Subjt:  -----------KVLLIGGGDGGILREISRHSSIEQIDICEIDTMLIDVYKKYFPEIAVGYKDSRVNLHIIDGTAFLSSVPAGTYDAIIVDAFDPIKPDDE

Query:  VVRSSLFEKVAKALRDGGVLCIQAESLWFHSLDIEILISKCQQVFKGSVQYAWTIVPTYPSGVIGFLLCSTQGPKVDFKNPINPIDPNENFGVATKPLKF
        +     FE +AKALR GGV+  QAES+W H   IE +++ C+Q+FKGSV YAWT VPTYPSG+IGF+LCST+GP VDFKNPINPID +E+   + +PLKF
Subjt:  VVRSSLFEKVAKALRDGGVLCIQAESLWFHSLDIEILISKCQQVFKGSVQYAWTIVPTYPSGVIGFLLCSTQGPKVDFKNPINPIDPNENFGVATKPLKF

Query:  YNSE
        YNSE
Subjt:  YNSE

Arabidopsis top hitse value%identityAlignment
AT1G23820.1 spermidine synthase 17.6e-8954.67Show/hide
Query:  EEEEDDSINSDALNHPTIPGWFSEHCPQWPGQAHFLKVDKVLFQGKSDYQSMLVFQSSAYG-----------------------------------KVLL
        E E  D     A     IPGWFSE  P WPG+AH LKV+KVLFQGKSDYQ ++VFQS+ YG                                   KVL+
Subjt:  EEEEDDSINSDALNHPTIPGWFSEHCPQWPGQAHFLKVDKVLFQGKSDYQSMLVFQSSAYG-----------------------------------KVLL

Query:  IGGGDGGILREISRHSSIEQIDICEIDTMLIDVYKKYFPEIAVGYKDSRVNLHIIDGTAFLSSVPAGTYDAIIVDAFDPIKPDDEVVRSSLFEKVAKALR
        IGGGDGG+LRE++RH+SIEQID+CEID M++DV K++FP++A+GY+D RVNL I DG AFL +   G+YDA+IVD+ DPI P  E+     F+ VA+ALR
Subjt:  IGGGDGGILREISRHSSIEQIDICEIDTMLIDVYKKYFPEIAVGYKDSRVNLHIIDGTAFLSSVPAGTYDAIIVDAFDPIKPDDEVVRSSLFEKVAKALR

Query:  DGGVLCIQAESLWFHSLDIEILISKCQQVFKGSVQYAWTIVPTYPSGVIGFLLCSTQGPKVDFKNPINPIDPNENFGVATKPLKFYNSE
         GGV+C QAESLW H   IE ++S C+++FKGSV YAWT VPTYPSGVIGF+LCST+GP VDFK+P+NPID  E+   +  PLKFYN+E
Subjt:  DGGVLCIQAESLWFHSLDIEILISKCQQVFKGSVQYAWTIVPTYPSGVIGFLLCSTQGPKVDFKNPINPIDPNENFGVATKPLKFYNSE

AT1G70310.1 spermidine synthase 24.2e-8750.76Show/hide
Query:  MDANGVLSFSDDLVFKQKKDEVFNNGCSHQHVAVENQKEEEEDDSINSDALNHPTIPGWFSEHCPQWPGQAHFLKVDKVLFQGKSDYQSMLVFQSSAYG-
        M +    S +D  V + ++ E  NNG +   +  EN   E ++ S  S       IPGWFSE  P WPG+AH LKV+K+LFQGKSDYQ ++VFQS+ YG 
Subjt:  MDANGVLSFSDDLVFKQKKDEVFNNGCSHQHVAVENQKEEEEDDSINSDALNHPTIPGWFSEHCPQWPGQAHFLKVDKVLFQGKSDYQSMLVFQSSAYG-

Query:  ----------------------------------KVLLIGGGDGGILREISRHSSIEQIDICEIDTMLIDVYKKYFPEIAVGYKDSRVNLHIIDGTAFLS
                                          KVL+IGGGDGG+LRE++RHSS+EQIDICEID M++DV K+YFP +AVGY+D RVNL I DG AFL 
Subjt:  ----------------------------------KVLLIGGGDGGILREISRHSSIEQIDICEIDTMLIDVYKKYFPEIAVGYKDSRVNLHIIDGTAFLS

Query:  SVPAGTYDAIIVDAFDPIKPDDEVVRSSLFEKVAKALRDGGVLCIQAESLWFHSLDIEILISKCQQVFKGSVQYAWTIVPTYPSGVIGFLLCSTQGPKVD
        +   GTYDA+IVD+ DPI P  E+     FE V +ALR GGV+C QAESLW H   IE ++S C+ +FKGSV YAWT VPTYPSGVIGF+LCS++GP+VD
Subjt:  SVPAGTYDAIIVDAFDPIKPDDEVVRSSLFEKVAKALRDGGVLCIQAESLWFHSLDIEILISKCQQVFKGSVQYAWTIVPTYPSGVIGFLLCSTQGPKVD

Query:  FKNPINPIDPNENFGVATKPLKFYNSE
        FK P++ ID +E+   +  PLK+YN+E
Subjt:  FKNPINPIDPNENFGVATKPLKFYNSE

AT5G53120.1 spermidine synthase 32.1e-7851.86Show/hide
Query:  DALNHPT-IPGWFSE---------------HCPQWPGQAHFLKVDKVLFQGKSDYQSMLVFQSSAYGK--------------------------------
        DA  H T + GWFSE               + P WPG+AH LKV+KVLF+ KSD+Q +LVF+S+ YGK                                
Subjt:  DALNHPT-IPGWFSE---------------HCPQWPGQAHFLKVDKVLFQGKSDYQSMLVFQSSAYGK--------------------------------

Query:  ---VLLIGGGDGGILREISRHSSIEQIDICEIDTMLIDVYKKYFPEIAVGYKDSRVNLHIIDGTAFLSSVPAGTYDAIIVDAFDPIKPDDEVVRSSLFEK
           VL++GGGDGG+LREISRHSS+E IDICEID M+IDV KK+FPE+AVG+ D RV LHI D   FL   P G YDAIIVD+ DP+ P   +V    FE 
Subjt:  ---VLLIGGGDGGILREISRHSSIEQIDICEIDTMLIDVYKKYFPEIAVGYKDSRVNLHIIDGTAFLSSVPAGTYDAIIVDAFDPIKPDDEVVRSSLFEK

Query:  VAKALRDGGVLCIQAESLWFHSLDIEILISKCQQVFKGSVQYAWTIVPTYPSGVIGFLLCSTQGPKVDFKNPINPIDPNENFGVATKPLKFYNSE
        +A+AL+ GGVLC  AES+W H+  IE +IS C+Q FK SV YAW+ VPTYPSGVIGF+LCST+GP VDFKNPINPI+  +      + LKFYNS+
Subjt:  VAKALRDGGVLCIQAESLWFHSLDIEILISKCQQVFKGSVQYAWTIVPTYPSGVIGFLLCSTQGPKVDFKNPINPIDPNENFGVATKPLKFYNSE

AT5G53120.2 spermidine synthase 32.1e-7851.86Show/hide
Query:  DALNHPT-IPGWFSE---------------HCPQWPGQAHFLKVDKVLFQGKSDYQSMLVFQSSAYGK--------------------------------
        DA  H T + GWFSE               + P WPG+AH LKV+KVLF+ KSD+Q +LVF+S+ YGK                                
Subjt:  DALNHPT-IPGWFSE---------------HCPQWPGQAHFLKVDKVLFQGKSDYQSMLVFQSSAYGK--------------------------------

Query:  ---VLLIGGGDGGILREISRHSSIEQIDICEIDTMLIDVYKKYFPEIAVGYKDSRVNLHIIDGTAFLSSVPAGTYDAIIVDAFDPIKPDDEVVRSSLFEK
           VL++GGGDGG+LREISRHSS+E IDICEID M+IDV KK+FPE+AVG+ D RV LHI D   FL   P G YDAIIVD+ DP+ P   +V    FE 
Subjt:  ---VLLIGGGDGGILREISRHSSIEQIDICEIDTMLIDVYKKYFPEIAVGYKDSRVNLHIIDGTAFLSSVPAGTYDAIIVDAFDPIKPDDEVVRSSLFEK

Query:  VAKALRDGGVLCIQAESLWFHSLDIEILISKCQQVFKGSVQYAWTIVPTYPSGVIGFLLCSTQGPKVDFKNPINPIDPNENFGVATKPLKFYNSE
        +A+AL+ GGVLC  AES+W H+  IE +IS C+Q FK SV YAW+ VPTYPSGVIGF+LCST+GP VDFKNPINPI+  +      + LKFYNS+
Subjt:  VAKALRDGGVLCIQAESLWFHSLDIEILISKCQQVFKGSVQYAWTIVPTYPSGVIGFLLCSTQGPKVDFKNPINPIDPNENFGVATKPLKFYNSE

AT5G53120.3 spermidine synthase 32.1e-7851.86Show/hide
Query:  DALNHPT-IPGWFSE---------------HCPQWPGQAHFLKVDKVLFQGKSDYQSMLVFQSSAYGK--------------------------------
        DA  H T + GWFSE               + P WPG+AH LKV+KVLF+ KSD+Q +LVF+S+ YGK                                
Subjt:  DALNHPT-IPGWFSE---------------HCPQWPGQAHFLKVDKVLFQGKSDYQSMLVFQSSAYGK--------------------------------

Query:  ---VLLIGGGDGGILREISRHSSIEQIDICEIDTMLIDVYKKYFPEIAVGYKDSRVNLHIIDGTAFLSSVPAGTYDAIIVDAFDPIKPDDEVVRSSLFEK
           VL++GGGDGG+LREISRHSS+E IDICEID M+IDV KK+FPE+AVG+ D RV LHI D   FL   P G YDAIIVD+ DP+ P   +V    FE 
Subjt:  ---VLLIGGGDGGILREISRHSSIEQIDICEIDTMLIDVYKKYFPEIAVGYKDSRVNLHIIDGTAFLSSVPAGTYDAIIVDAFDPIKPDDEVVRSSLFEK

Query:  VAKALRDGGVLCIQAESLWFHSLDIEILISKCQQVFKGSVQYAWTIVPTYPSGVIGFLLCSTQGPKVDFKNPINPIDPNENFGVATKPLKFYNSE
        +A+AL+ GGVLC  AES+W H+  IE +IS C+Q FK SV YAW+ VPTYPSGVIGF+LCST+GP VDFKNPINPI+  +      + LKFYNS+
Subjt:  VAKALRDGGVLCIQAESLWFHSLDIEILISKCQQVFKGSVQYAWTIVPTYPSGVIGFLLCSTQGPKVDFKNPINPIDPNENFGVATKPLKFYNSE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCATGGATGCAAATGGGGTTCTTTCTTTTTCAGATGATTTGGTGTTTAAGCAGAAGAAAGATGAAGTTTTCAACAATGGCTGCTCTCATCAGCATGTTGCAGTTGA
AAATCAAAAAGAAGAAGAAGAAGACGACTCCATTAATAGTGATGCTCTCAACCATCCAACCATTCCTGGTTGGTTCTCTGAGCACTGCCCACAATGGCCAGGTCAAGCAC
ACTTCTTAAAGGTGGACAAAGTTTTGTTTCAAGGAAAGTCCGATTACCAATCCATGTTGGTGTTTCAGTCATCAGCATATGGAAAGGTTTTGCTGATTGGGGGAGGAGAT
GGTGGCATCCTAAGAGAAATTTCTAGGCATTCTTCCATTGAACAAATTGATATTTGTGAAATAGACACCATGCTCATTGACGTGTACAAGAAGTATTTTCCAGAAATTGC
AGTTGGGTATAAAGATTCTCGAGTGAATCTTCACATAATAGATGGAACTGCGTTTCTGAGTTCCGTTCCAGCAGGAACCTACGATGCAATCATAGTCGACGCTTTCGATC
CAATAAAGCCAGATGATGAGGTTGTGAGAAGTAGCTTGTTTGAGAAGGTGGCAAAAGCACTTAGGGATGGAGGAGTGCTTTGTATTCAAGCAGAAAGCCTTTGGTTTCAT
TCTCTTGACATTGAAATTTTGATCTCAAAATGCCAACAAGTATTCAAAGGCTCAGTTCAATATGCTTGGACCATTGTTCCTACTTATCCTAGTGGGGTAATTGGTTTCTT
GTTGTGTTCCACTCAAGGACCTAAAGTTGACTTCAAAAATCCGATCAATCCCATTGACCCAAATGAGAATTTTGGAGTTGCAACCAAACCGTTGAAGTTTTACAATTCAG
AGGCA
mRNA sequenceShow/hide mRNA sequence
AATAAACTTTTTTTTAATGAATAATTAATAGTAAATTAAATATATAGACTCAATCCTATTATCAAAGCATGTGGAAGATTTTATGAAGGGCCCACTTTTTTGCCACCAAG
TTGCATTCTATATAAACCCCAAGACCCAACTCCATTACAAAGCCTAATTTTTTTTTTTTAAACAGAGTTTTAAAAGAAAAAAAAAATTTTAAAATTTTTTATTGTTGAAT
GGCCATGGATGCAAATGGGGTTCTTTCTTTTTCAGATGATTTGGTGTTTAAGCAGAAGAAAGATGAAGTTTTCAACAATGGCTGCTCTCATCAGCATGTTGCAGTTGAAA
ATCAAAAAGAAGAAGAAGAAGACGACTCCATTAATAGTGATGCTCTCAACCATCCAACCATTCCTGGTTGGTTCTCTGAGCACTGCCCACAATGGCCAGGTCAAGCACAC
TTCTTAAAGGTGGACAAAGTTTTGTTTCAAGGAAAGTCCGATTACCAATCCATGTTGGTGTTTCAGTCATCAGCATATGGAAAGGTTTTGCTGATTGGGGGAGGAGATGG
TGGCATCCTAAGAGAAATTTCTAGGCATTCTTCCATTGAACAAATTGATATTTGTGAAATAGACACCATGCTCATTGACGTGTACAAGAAGTATTTTCCAGAAATTGCAG
TTGGGTATAAAGATTCTCGAGTGAATCTTCACATAATAGATGGAACTGCGTTTCTGAGTTCCGTTCCAGCAGGAACCTACGATGCAATCATAGTCGACGCTTTCGATCCA
ATAAAGCCAGATGATGAGGTTGTGAGAAGTAGCTTGTTTGAGAAGGTGGCAAAAGCACTTAGGGATGGAGGAGTGCTTTGTATTCAAGCAGAAAGCCTTTGGTTTCATTC
TCTTGACATTGAAATTTTGATCTCAAAATGCCAACAAGTATTCAAAGGCTCAGTTCAATATGCTTGGACCATTGTTCCTACTTATCCTAGTGGGGTAATTGGTTTCTTGT
TGTGTTCCACTCAAGGACCTAAAGTTGACTTCAAAAATCCGATCAATCCCATTGACCCAAATGAGAATTTTGGAGTTGCAACCAAACCGTTGAAGTTTTACAATTCAGAG
GCA
Protein sequenceShow/hide protein sequence
MAMDANGVLSFSDDLVFKQKKDEVFNNGCSHQHVAVENQKEEEEDDSINSDALNHPTIPGWFSEHCPQWPGQAHFLKVDKVLFQGKSDYQSMLVFQSSAYGKVLLIGGGD
GGILREISRHSSIEQIDICEIDTMLIDVYKKYFPEIAVGYKDSRVNLHIIDGTAFLSSVPAGTYDAIIVDAFDPIKPDDEVVRSSLFEKVAKALRDGGVLCIQAESLWFH
SLDIEILISKCQQVFKGSVQYAWTIVPTYPSGVIGFLLCSTQGPKVDFKNPINPIDPNENFGVATKPLKFYNSEA