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Lsi06G015710 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G015710
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionKinetochore protein SPC25
Genome locationchr06:26142282..26142506
RNA-Seq ExpressionLsi06G015710
SyntenyLsi06G015710
Gene Ontology termsGO:0007049 - cell cycle (biological process)
GO:0007059 - chromosome segregation (biological process)
GO:0051301 - cell division (biological process)
GO:0005634 - nucleus (cellular component)
GO:0031262 - Ndc80 complex (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057836.1 putative kinetochore protein SPC25 [Cucumis melo var. makuwa]5.2e-2081.08Show/hide
Query:  MENKAEDSVRARLEKLRIARVNEIPVQQQKMESFADSFCKSVESINVRSRANALSQGEPSIFLNLLENEFCAKL
        ME KA DSVRARLEKLRI R NEIPVQQQKMESFADSFCKSVESI+VRSRANALSQGE SIF  L   E   KL
Subjt:  MENKAEDSVRARLEKLRIARVNEIPVQQQKMESFADSFCKSVESINVRSRANALSQGEPSIFLNLLENEFCAKL

TYJ98520.1 putative kinetochore protein SPC25 [Cucumis melo var. makuwa]5.2e-2081.08Show/hide
Query:  MENKAEDSVRARLEKLRIARVNEIPVQQQKMESFADSFCKSVESINVRSRANALSQGEPSIFLNLLENEFCAKL
        ME KA DSVRARLEKLRI R NEIPVQQQKMESFADSFCKSVESI+VRSRANALSQGE SIF  L   E   KL
Subjt:  MENKAEDSVRARLEKLRIARVNEIPVQQQKMESFADSFCKSVESINVRSRANALSQGEPSIFLNLLENEFCAKL

XP_004138099.1 kinetochore protein SPC25 homolog [Cucumis sativus]9.1e-1789.66Show/hide
Query:  MENKAEDSVRARLEKLRIARVNEIPVQQQKMESFADSFCKSVESINVRSRANALSQGE
        MENKA DSVRARLEKLRI R NEIPVQQQKMESFADSF KSVESI+VRSRANALSQG+
Subjt:  MENKAEDSVRARLEKLRIARVNEIPVQQQKMESFADSFCKSVESINVRSRANALSQGE

XP_008464538.1 PREDICTED: probable kinetochore protein SPC25 [Cucumis melo]5.3e-1789.66Show/hide
Query:  MENKAEDSVRARLEKLRIARVNEIPVQQQKMESFADSFCKSVESINVRSRANALSQGE
        ME KA DSVRARLEKLRI R NEIPVQQQKMESFADSFCKSVESI+VRSRANALSQG+
Subjt:  MENKAEDSVRARLEKLRIARVNEIPVQQQKMESFADSFCKSVESINVRSRANALSQGE

XP_038880541.1 kinetochore protein SPC25 homolog [Benincasa hispida]2.9e-1584.48Show/hide
Query:  MENKAEDSVRARLEKLRIARVNEIPVQQQKMESFADSFCKSVESINVRSRANALSQGE
        MENKA+DSVRARLEKLRI R  EIP QQQKMESF +SF KSVESINVRSRANALSQG+
Subjt:  MENKAEDSVRARLEKLRIARVNEIPVQQQKMESFADSFCKSVESINVRSRANALSQGE

TrEMBL top hitse value%identityAlignment
A0A0A0LU84 Kinetochore protein SPC254.4e-1789.66Show/hide
Query:  MENKAEDSVRARLEKLRIARVNEIPVQQQKMESFADSFCKSVESINVRSRANALSQGE
        MENKA DSVRARLEKLRI R NEIPVQQQKMESFADSF KSVESI+VRSRANALSQG+
Subjt:  MENKAEDSVRARLEKLRIARVNEIPVQQQKMESFADSFCKSVESINVRSRANALSQGE

A0A1S3CM71 Kinetochore protein SPC252.6e-1789.66Show/hide
Query:  MENKAEDSVRARLEKLRIARVNEIPVQQQKMESFADSFCKSVESINVRSRANALSQGE
        ME KA DSVRARLEKLRI R NEIPVQQQKMESFADSFCKSVESI+VRSRANALSQG+
Subjt:  MENKAEDSVRARLEKLRIARVNEIPVQQQKMESFADSFCKSVESINVRSRANALSQGE

A0A5A7UUK0 Kinetochore protein SPC252.5e-2081.08Show/hide
Query:  MENKAEDSVRARLEKLRIARVNEIPVQQQKMESFADSFCKSVESINVRSRANALSQGEPSIFLNLLENEFCAKL
        ME KA DSVRARLEKLRI R NEIPVQQQKMESFADSFCKSVESI+VRSRANALSQGE SIF  L   E   KL
Subjt:  MENKAEDSVRARLEKLRIARVNEIPVQQQKMESFADSFCKSVESINVRSRANALSQGEPSIFLNLLENEFCAKL

A0A5D3BFE9 Kinetochore protein SPC252.5e-2081.08Show/hide
Query:  MENKAEDSVRARLEKLRIARVNEIPVQQQKMESFADSFCKSVESINVRSRANALSQGEPSIFLNLLENEFCAKL
        ME KA DSVRARLEKLRI R NEIPVQQQKMESFADSFCKSVESI+VRSRANALSQGE SIF  L   E   KL
Subjt:  MENKAEDSVRARLEKLRIARVNEIPVQQQKMESFADSFCKSVESINVRSRANALSQGEPSIFLNLLENEFCAKL

A0A6J1BYG5 Kinetochore protein SPC252.3e-1374.14Show/hide
Query:  MENKAEDSVRARLEKLRIARVNEIPVQQQKMESFADSFCKSVESINVRSRANALSQGE
        MENK EDS+R ++E LR+ R  EIPVQQQKMESFADSF KS+ESI VRSR NALSQG+
Subjt:  MENKAEDSVRARLEKLRIARVNEIPVQQQKMESFADSFCKSVESINVRSRANALSQGE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAACAAGGCGGAAGATTCTGTTCGTGCGAGGCTGGAGAAACTTCGAATTGCTCGTGTAAATGAAATTCCAGTTCAGCAGCAAAAGATGGAGTCCTTCGCGGATTC
ATTCTGCAAATCTGTGGAATCGATCAATGTAAGGTCCCGAGCAAATGCCCTAAGTCAAGGTGAGCCATCTATTTTCCTCAATTTACTCGAGAATGAATTCTGTGCGAAAC
TGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAACAAGGCGGAAGATTCTGTTCGTGCGAGGCTGGAGAAACTTCGAATTGCTCGTGTAAATGAAATTCCAGTTCAGCAGCAAAAGATGGAGTCCTTCGCGGATTC
ATTCTGCAAATCTGTGGAATCGATCAATGTAAGGTCCCGAGCAAATGCCCTAAGTCAAGGTGAGCCATCTATTTTCCTCAATTTACTCGAGAATGAATTCTGTGCGAAAC
TGTAA
Protein sequenceShow/hide protein sequence
MENKAEDSVRARLEKLRIARVNEIPVQQQKMESFADSFCKSVESINVRSRANALSQGEPSIFLNLLENEFCAKL