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Lsi06G015780 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G015780
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionG-patch domain-containing protein
Genome locationchr06:26183087..26184481
RNA-Seq ExpressionLsi06G015780
SyntenyLsi06G015780
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0016491 - oxidoreductase activity (molecular function)
InterPro domainsIPR041591 - OCRE domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN63555.2 hypothetical protein Csa_013069 [Cucumis sativus]4.8e-5185.83Show/hide
Query:  MEEGETKFGSEELQDSNCSFVWDENSQLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSYVLLQLNEGEECKTYPDNPVNGESCSQVCNTGSEDHSSFE
        MEE ETK GSEELQDSNCSFVWDENSQLYFHSSSGFYHDPV GWYYSSRDGSYYKFENGSYV LQLNEGEECKTYPDNPV GE  SQVC+TGSEDH SFE
Subjt:  MEEGETKFGSEELQDSNCSFVWDENSQLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSYVLLQLNEGEECKTYPDNPVNGESCSQVCNTGSEDHSSFE

Query:  ASEIDTSKCKEIDGDGLPLG
        A+E DT  CK  D DGLP G
Subjt:  ASEIDTSKCKEIDGDGLPLG

XP_031745488.1 LOW QUALITY PROTEIN: uncharacterized protein LOC101205178 [Cucumis sativus]4.8e-5185.83Show/hide
Query:  MEEGETKFGSEELQDSNCSFVWDENSQLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSYVLLQLNEGEECKTYPDNPVNGESCSQVCNTGSEDHSSFE
        MEE ETK GSEELQDSNCSFVWDENSQLYFHSSSGFYHDPV GWYYSSRDGSYYKFENGSYV LQLNEGEECKTYPDNPV GE  SQVC+TGSEDH SFE
Subjt:  MEEGETKFGSEELQDSNCSFVWDENSQLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSYVLLQLNEGEECKTYPDNPVNGESCSQVCNTGSEDHSSFE

Query:  ASEIDTSKCKEIDGDGLPLG
        A+E DT  CK  D DGLP G
Subjt:  ASEIDTSKCKEIDGDGLPLG

XP_038878955.1 uncharacterized protein LOC120071038 isoform X1 [Benincasa hispida]6.3e-5185.95Show/hide
Query:  MEEGETKFGSEELQDSNCSFVWDENSQLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSYVLLQLNE-GEECKTYPDNPVNGESCSQVCNTGSEDHSSF
        MEE ET+FGSEELQDS C FVWDENSQLYFHSSSGFYHDP AGWYYSSRDGSYYKFENG YVLLQ NE GEECKTY DNPV G+S SQVCNTGSEDHS F
Subjt:  MEEGETKFGSEELQDSNCSFVWDENSQLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSYVLLQLNE-GEECKTYPDNPVNGESCSQVCNTGSEDHSSF

Query:  EASEIDTSKCKEIDGDGLPLG
        EA+EIDTSKCK  D DGLPLG
Subjt:  EASEIDTSKCKEIDGDGLPLG

XP_038878956.1 uncharacterized protein LOC120071038 isoform X2 [Benincasa hispida]2.5e-5286.67Show/hide
Query:  MEEGETKFGSEELQDSNCSFVWDENSQLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSYVLLQLNEGEECKTYPDNPVNGESCSQVCNTGSEDHSSFE
        MEE ET+FGSEELQDS C FVWDENSQLYFHSSSGFYHDP AGWYYSSRDGSYYKFENG YVLLQ NEGEECKTY DNPV G+S SQVCNTGSEDHS FE
Subjt:  MEEGETKFGSEELQDSNCSFVWDENSQLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSYVLLQLNEGEECKTYPDNPVNGESCSQVCNTGSEDHSSFE

Query:  ASEIDTSKCKEIDGDGLPLG
        A+EIDTSKCK  D DGLPLG
Subjt:  ASEIDTSKCKEIDGDGLPLG

XP_038878958.1 uncharacterized protein LOC120071038 isoform X4 [Benincasa hispida]1.8e-5085.83Show/hide
Query:  MEEGETKFGSEELQDSNCSFVWDENSQLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSYVLLQLNEGEECKTYPDNPVNGESCSQVCNTGSEDHSSFE
        MEE ET+FGSEELQDS C FVWDENSQLYFH SSGFYHDP AGWYYSSRDGSYYKFENG YVLLQ NEGEECKTY DNPV G+S SQVCNTGSEDHS FE
Subjt:  MEEGETKFGSEELQDSNCSFVWDENSQLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSYVLLQLNEGEECKTYPDNPVNGESCSQVCNTGSEDHSSFE

Query:  ASEIDTSKCKEIDGDGLPLG
        A+EIDTSKCK  D DGLPLG
Subjt:  ASEIDTSKCKEIDGDGLPLG

TrEMBL top hitse value%identityAlignment
A0A0A0LP33 G-patch domain-containing protein5.7e-5085.12Show/hide
Query:  MEEGETKFGSEELQDSNCSFVWDENSQLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSYVLLQLNE-GEECKTYPDNPVNGESCSQVCNTGSEDHSSF
        MEE ETK GSEELQDSNCSFVWDENSQLYFHSSSGFYHDPV GWYYSSRDGSYYKFENGSYV LQLNE GEECKTYPDNPV GE  SQVC+TGSEDH SF
Subjt:  MEEGETKFGSEELQDSNCSFVWDENSQLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSYVLLQLNE-GEECKTYPDNPVNGESCSQVCNTGSEDHSSF

Query:  EASEIDTSKCKEIDGDGLPLG
        EA+E DT  CK  D DGLP G
Subjt:  EASEIDTSKCKEIDGDGLPLG

A0A1S3CLU7 uncharacterized protein LOC103502387 isoform X21.1e-4884.17Show/hide
Query:  MEEGETKFGSEELQDSNCSFVWDENSQLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSYVLLQLNEGEECKTYPDNPVNGESCSQVCNTGSEDHSSFE
        MEE ETK GSEELQDSNCSFVWDENSQLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSYVLLQLNEGEECKTYPDNP             SEDHSSFE
Subjt:  MEEGETKFGSEELQDSNCSFVWDENSQLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSYVLLQLNEGEECKTYPDNPVNGESCSQVCNTGSEDHSSFE

Query:  ASEIDTSKCKEIDGDGLPLG
        A+E DTSKCK  DGDGLPLG
Subjt:  ASEIDTSKCKEIDGDGLPLG

A0A6J1E1H5 SUPPRESSOR OF ABI3-5 isoform X42.8e-4983.47Show/hide
Query:  EGETKFGSEELQDSNCSFVWDENSQLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSYVLLQLNE-GEECKTYPDNPVNGESCSQVCNTGSEDHSSFEA
        E ET+ GSEELQ+S CSFVWDENSQLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSYVLLQ+NE  EECKTYPD+PV GE C QVC +GSEDHSSFEA
Subjt:  EGETKFGSEELQDSNCSFVWDENSQLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSYVLLQLNE-GEECKTYPDNPVNGESCSQVCNTGSEDHSSFEA

Query:  SEIDTSKCKEIDGDGLPLGAA
        SEIDTS CK   GDGLPL  A
Subjt:  SEIDTSKCKEIDGDGLPLGAA

A0A6J1E1M2 uncharacterized protein LOC111429960 isoform X12.8e-4983.47Show/hide
Query:  EGETKFGSEELQDSNCSFVWDENSQLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSYVLLQLNE-GEECKTYPDNPVNGESCSQVCNTGSEDHSSFEA
        E ET+ GSEELQ+S CSFVWDENSQLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSYVLLQ+NE  EECKTYPD+PV GE C QVC +GSEDHSSFEA
Subjt:  EGETKFGSEELQDSNCSFVWDENSQLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSYVLLQLNE-GEECKTYPDNPVNGESCSQVCNTGSEDHSSFEA

Query:  SEIDTSKCKEIDGDGLPLGAA
        SEIDTS CK   GDGLPL  A
Subjt:  SEIDTSKCKEIDGDGLPLGAA

A0A6J1E6V8 uncharacterized protein LOC111429960 isoform X21.2e-5084.17Show/hide
Query:  EGETKFGSEELQDSNCSFVWDENSQLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSYVLLQLNEGEECKTYPDNPVNGESCSQVCNTGSEDHSSFEAS
        E ET+ GSEELQ+S CSFVWDENSQLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSYVLLQ+NE EECKTYPD+PV GE C QVC +GSEDHSSFEAS
Subjt:  EGETKFGSEELQDSNCSFVWDENSQLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSYVLLQLNEGEECKTYPDNPVNGESCSQVCNTGSEDHSSFEAS

Query:  EIDTSKCKEIDGDGLPLGAA
        EIDTS CK   GDGLPL  A
Subjt:  EIDTSKCKEIDGDGLPLGAA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G54230.1 suppressor of abi3-51.2e-0431.94Show/hide
Query:  FVWDENSQLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSYVLL----QLNEGEECKTYPDNPVNGESCSQ
        +VWDE S  Y+ ++SG+Y+D  +G YY S  G +Y ++  +   +    Q NE +  +  PD+    +S  Q
Subjt:  FVWDENSQLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSYVLL----QLNEGEECKTYPDNPVNGESCSQ

AT3G54230.2 suppressor of abi3-51.2e-0431.94Show/hide
Query:  FVWDENSQLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSYVLL----QLNEGEECKTYPDNPVNGESCSQ
        +VWDE S  Y+ ++SG+Y+D  +G YY S  G +Y ++  +   +    Q NE +  +  PD+    +S  Q
Subjt:  FVWDENSQLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSYVLL----QLNEGEECKTYPDNPVNGESCSQ

AT4G34140.1 D111/G-patch domain-containing protein3.5e-1561.67Show/hide
Query:  EELQD--SNCSFVWDENSQLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSYVLLQLNE
        +ELQ+     S+VWD ++QLY H SSGFYHDP AGWYY S+DG YYK ENG YV L+ +E
Subjt:  EELQD--SNCSFVWDENSQLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSYVLLQLNE

AT4G34140.2 D111/G-patch domain-containing protein3.5e-1561.67Show/hide
Query:  EELQD--SNCSFVWDENSQLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSYVLLQLNE
        +ELQ+     S+VWD ++QLY H SSGFYHDP AGWYY S+DG YYK ENG YV L+ +E
Subjt:  EELQD--SNCSFVWDENSQLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSYVLLQLNE

AT4G34140.3 D111/G-patch domain-containing protein3.5e-1561.67Show/hide
Query:  EELQD--SNCSFVWDENSQLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSYVLLQLNE
        +ELQ+     S+VWD ++QLY H SSGFYHDP AGWYY S+DG YYK ENG YV L+ +E
Subjt:  EELQD--SNCSFVWDENSQLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSYVLLQLNE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAGGGCGAGACAAAGTTCGGTTCCGAGGAATTGCAGGACAGTAATTGCTCGTTCGTTTGGGATGAGAATTCTCAGCTGTACTTCCATTCCAGTAGTGGATTTTA
TCACGATCCTGTTGCCGGTTGGTATTATAGCAGTCGAGATGGTTCTTATTACAAATTCGAAAATGGAAGCTATGTGCTTCTTCAGTTGAACGAGGGTGAAGAATGTAAGA
CGTATCCTGATAATCCTGTTAACGGCGAATCATGTAGTCAAGTGTGTAATACTGGCAGCGAGGATCACTCTTCATTTGAGGCCAGTGAAATTGATACTTCTAAATGCAAA
GAAATTGATGGTGACGGACTACCATTAGGAGCTGCTAATTGCGTATCTTCTACTAATTCTTACTCACTTAGAGGTGGCATGGCCTCCACGGTGAACCACCTGCCCTCCCC
TCCAATACGCTCCATCCTTATTGACAGGAAAATCTTCACTTTACAGTATGCCACAACCACAAATGGCCATGAGATCCTACTAACGGAACAAGGAAAAGCATCAAACCAAT
CACTCAGTCTCTCTCGGAAAGCATTGGATTGGTTGGCATCCTCCTTCCGATCGCTTCATCGAGACCCCTGCAACTACAAGTTTTTCAAAAAATTGATTGATGACAATGCA
ACTCTTTGGTTGGAAAAACATAGTAACAAGCATGACTACTATGCAGAATTGACTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGGAGGGCGAGACAAAGTTCGGTTCCGAGGAATTGCAGGACAGTAATTGCTCGTTCGTTTGGGATGAGAATTCTCAGCTGTACTTCCATTCCAGTAGTGGATTTTA
TCACGATCCTGTTGCCGGTTGGTATTATAGCAGTCGAGATGGTTCTTATTACAAATTCGAAAATGGAAGCTATGTGCTTCTTCAGTTGAACGAGGGTGAAGAATGTAAGA
CGTATCCTGATAATCCTGTTAACGGCGAATCATGTAGTCAAGTGTGTAATACTGGCAGCGAGGATCACTCTTCATTTGAGGCCAGTGAAATTGATACTTCTAAATGCAAA
GAAATTGATGGTGACGGACTACCATTAGGAGCTGCTAATTGCGTATCTTCTACTAATTCTTACTCACTTAGAGGTGGCATGGCCTCCACGGTGAACCACCTGCCCTCCCC
TCCAATACGCTCCATCCTTATTGACAGGAAAATCTTCACTTTACAGTATGCCACAACCACAAATGGCCATGAGATCCTACTAACGGAACAAGGAAAAGCATCAAACCAAT
CACTCAGTCTCTCTCGGAAAGCATTGGATTGGTTGGCATCCTCCTTCCGATCGCTTCATCGAGACCCCTGCAACTACAAGTTTTTCAAAAAATTGATTGATGACAATGCA
ACTCTTTGGTTGGAAAAACATAGTAACAAGCATGACTACTATGCAGAATTGACTTAG
Protein sequenceShow/hide protein sequence
MEEGETKFGSEELQDSNCSFVWDENSQLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSYVLLQLNEGEECKTYPDNPVNGESCSQVCNTGSEDHSSFEASEIDTSKCK
EIDGDGLPLGAANCVSSTNSYSLRGGMASTVNHLPSPPIRSILIDRKIFTLQYATTTNGHEILLTEQGKASNQSLSLSRKALDWLASSFRSLHRDPCNYKFFKKLIDDNA
TLWLEKHSNKHDYYAELT