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Lsi06G015890 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G015890
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionU-box domain-containing protein 33-like
Genome locationchr06:26293507..26294768
RNA-Seq ExpressionLsi06G015890
SyntenyLsi06G015890
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057823.1 U-box domain-containing protein 33-like [Cucumis melo var. makuwa]2.5e-1249.45Show/hide
Query:  EIVEIVDETTTIISSKDSGATDVYGPLIMLSYLTTRKRMAKGEFVKKNAPEFCEVIIVYEGKKVDECQQEMWLLPSENSDCQLRRCSRKNL
        +++ +++ T  +I +K   +T + G           KRM KGEFVKKNAPE+CEV IVYEGKKV+ECQQEM LLPS       +R S KNL
Subjt:  EIVEIVDETTTIISSKDSGATDVYGPLIMLSYLTTRKRMAKGEFVKKNAPEFCEVIIVYEGKKVDECQQEMWLLPSENSDCQLRRCSRKNL

KAG6589422.1 DEAD-box ATP-dependent RNA helicase 30, partial [Cucurbita argyrosperma subsp. sororia]2.5e-1253.26Show/hide
Query:  EIVEIVDETTTIISSKDSGATDVYGPLIMLSYLTTRKRMAKGEFVKKNAPEFCEVIIVYEGKKVDECQQEMWLLP-SENSDCQLRRCSRKNL
        +++ +++ T  +I +K+  +T + G           KRMAKGEFVKKNAPE CEV IVYEGKKVDE  QEM LLP S+NS C+ RR S KNL
Subjt:  EIVEIVDETTTIISSKDSGATDVYGPLIMLSYLTTRKRMAKGEFVKKNAPEFCEVIIVYEGKKVDECQQEMWLLP-SENSDCQLRRCSRKNL

XP_008464515.1 PREDICTED: U-box domain-containing protein 33-like [Cucumis melo]6.7e-1353.26Show/hide
Query:  EIVEIVDETTTIISSKDSGATDVYGPLIMLSYLTTRKRMAKGEFVKKNAPEFCEVIIVYEGKKVDECQQEMWLLPSEN-SDCQLRRCSRKNL
        +++ +++ T  +I +K   +T + G           KRM KGEFVKKNAPE+CEV IVYEGKKV+ECQQEM LLPS   SD Q RR S KNL
Subjt:  EIVEIVDETTTIISSKDSGATDVYGPLIMLSYLTTRKRMAKGEFVKKNAPEFCEVIIVYEGKKVDECQQEMWLLPSEN-SDCQLRRCSRKNL

XP_038876192.1 U-box domain-containing protein 33-like [Benincasa hispida]3.9e-1353.26Show/hide
Query:  EIVEIVDETTTIISSKDSGATDVYGPLIMLSYLTTRKRMAKGEFVKKNAPEFCEVIIVYEGKKVDECQQEMWLL-PSENSDCQLRRCSRKNL
        +++ +++ T  +I +K   +T + G           KRM KGEFVKKNAPEFCEV IVYEGKKVDE QQEM LL  S++SDC  RR S KNL
Subjt:  EIVEIVDETTTIISSKDSGATDVYGPLIMLSYLTTRKRMAKGEFVKKNAPEFCEVIIVYEGKKVDECQQEMWLL-PSENSDCQLRRCSRKNL

XP_038879425.1 U-box domain-containing protein 33-like [Benincasa hispida]1.0e-1657.61Show/hide
Query:  EIVEIVDETTTIISSKDSGATDVYGPLIMLSYLTTRKRMAKGEFVKKNAPEFCEVIIVYEGKKVDECQQEMWLLP-SENSDCQLRRCSRKNL
        +++ +++ T  +I +K   +T + G           KRMAKGEFVKKNAPEFCEV IVYEGKKVDECQ+EM LLP SE+SDCQ RR S KNL
Subjt:  EIVEIVDETTTIISSKDSGATDVYGPLIMLSYLTTRKRMAKGEFVKKNAPEFCEVIIVYEGKKVDECQQEMWLLP-SENSDCQLRRCSRKNL

TrEMBL top hitse value%identityAlignment
A0A1S3CN70 U-box domain-containing protein 33-like3.2e-1353.26Show/hide
Query:  EIVEIVDETTTIISSKDSGATDVYGPLIMLSYLTTRKRMAKGEFVKKNAPEFCEVIIVYEGKKVDECQQEMWLLPSEN-SDCQLRRCSRKNL
        +++ +++ T  +I +K   +T + G           KRM KGEFVKKNAPE+CEV IVYEGKKV+ECQQEM LLPS   SD Q RR S KNL
Subjt:  EIVEIVDETTTIISSKDSGATDVYGPLIMLSYLTTRKRMAKGEFVKKNAPEFCEVIIVYEGKKVDECQQEMWLLPSEN-SDCQLRRCSRKNL

A0A5A7UPM8 U-box domain-containing protein 33-like1.2e-1249.45Show/hide
Query:  EIVEIVDETTTIISSKDSGATDVYGPLIMLSYLTTRKRMAKGEFVKKNAPEFCEVIIVYEGKKVDECQQEMWLLPSENSDCQLRRCSRKNL
        +++ +++ T  +I +K   +T + G           KRM KGEFVKKNAPE+CEV IVYEGKKV+ECQQEM LLPS       +R S KNL
Subjt:  EIVEIVDETTTIISSKDSGATDVYGPLIMLSYLTTRKRMAKGEFVKKNAPEFCEVIIVYEGKKVDECQQEMWLLPSENSDCQLRRCSRKNL

A0A5D3BHA8 U-box domain-containing protein 33-like3.2e-1353.26Show/hide
Query:  EIVEIVDETTTIISSKDSGATDVYGPLIMLSYLTTRKRMAKGEFVKKNAPEFCEVIIVYEGKKVDECQQEMWLLPSEN-SDCQLRRCSRKNL
        +++ +++ T  +I +K   +T + G           KRM KGEFVKKNAPE+CEV IVYEGKKV+ECQQEM LLPS   SD Q RR S KNL
Subjt:  EIVEIVDETTTIISSKDSGATDVYGPLIMLSYLTTRKRMAKGEFVKKNAPEFCEVIIVYEGKKVDECQQEMWLLPSEN-SDCQLRRCSRKNL

A0A6J1C2N1 U-box domain-containing protein 33-like2.8e-1251.09Show/hide
Query:  EIVEIVDETTTIISSKDSGATDVYGPLIMLSYLTTRKRMAKGEFVKKNAPEFCEVIIVYEGKKVDECQQEMWLLP-SENSDCQLRRCSRKNL
        +++ +++ T  +I +K   +T + G           KRMAKGEFVKKNAP+FCEV IVYEG+KVD+ QQEM LLP S+ S+C+ RR S KNL
Subjt:  EIVEIVDETTTIISSKDSGATDVYGPLIMLSYLTTRKRMAKGEFVKKNAPEFCEVIIVYEGKKVDECQQEMWLLP-SENSDCQLRRCSRKNL

A0A6J1HJ95 U-box domain-containing protein 33-like1.2e-1253.26Show/hide
Query:  EIVEIVDETTTIISSKDSGATDVYGPLIMLSYLTTRKRMAKGEFVKKNAPEFCEVIIVYEGKKVDECQQEMWLLP-SENSDCQLRRCSRKNL
        +++ +++ T  +I +K+  +T + G           KRMAKGEFVKKNAPE CEV IVYEGKKVDE  QEM LLP S+NS C+ RR S KNL
Subjt:  EIVEIVDETTTIISSKDSGATDVYGPLIMLSYLTTRKRMAKGEFVKKNAPEFCEVIIVYEGKKVDECQQEMWLLP-SENSDCQLRRCSRKNL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCCGGAGATCGTCGAGATTGTAGACGAAACTACGACTATTATCAGTAGCAAAGACAGCGGTGCAACCGATGTCTATGGGCCCTTGATCATGCTGTCTTACCTGAC
TACTAGGAAAAGAATGGCTAAAGGAGAGTTTGTGAAAAAGAATGCACCAGAATTTTGTGAGGTTATCATTGTTTATGAAGGCAAGAAAGTGGATGAGTGTCAACAGGAAA
TGTGGTTGCTTCCTTCTGAAAATTCCGATTGCCAGCTACGGCGATGCTCCCGAAAGAACTTGGTTCTAGTGGGTTTGCTTGTCGAGCAGGTCGGGTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTCCGGAGATCGTCGAGATTGTAGACGAAACTACGACTATTATCAGTAGCAAAGACAGCGGTGCAACCGATGTCTATGGGCCCTTGATCATGCTGTCTTACCTGAC
TACTAGGAAAAGAATGGCTAAAGGAGAGTTTGTGAAAAAGAATGCACCAGAATTTTGTGAGGTTATCATTGTTTATGAAGGCAAGAAAGTGGATGAGTGTCAACAGGAAA
TGTGGTTGCTTCCTTCTGAAAATTCCGATTGCCAGCTACGGCGATGCTCCCGAAAGAACTTGGTTCTAGTGGGTTTGCTTGTCGAGCAGGTCGGGTTTTGA
Protein sequenceShow/hide protein sequence
MSPEIVEIVDETTTIISSKDSGATDVYGPLIMLSYLTTRKRMAKGEFVKKNAPEFCEVIIVYEGKKVDECQQEMWLLPSENSDCQLRRCSRKNLVLVGLLVEQVGF