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Lsi06G016070 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G016070
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionLeucine-rich repeat protein kinase family protein
Genome locationchr06:26428780..26431052
RNA-Seq ExpressionLsi06G016070
SyntenyLsi06G016070
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBH03733.1 Leucine-rich repeat protein kinase family protein [Prunus dulcis]5.4e-1334.85Show/hide
Query:  RPEISNSSFHVVIKQNICRLQIPVNNTGGMVHVKILQPRCNSKSNVMAIVSLLLKPDSTYLASCHSSSIRTQGSGNQDEGHEPQEEEDSDAGFHPHSSDA
        +PEI NSSFH++IKQ+IC L+I +N+                                                                        +A
Subjt:  RPEISNSSFHVVIKQNICRLQIPVNNTGGMVHVKILQPRCNSKSNVMAIVSLLLKPDSTYLASCHSSSIRTQGSGNQDEGHEPQEEEDSDAGFHPHSSDA

Query:  SASSFSRKAKSSRLINLGAKIEGPEFLLPPFIAAMTSLNSREKINPDKLPAIAPARNPSIQEIIFFALFFRCLGVGGVAGDAAGALEVGALAAALCVP
        + SS SRKAKSS L+    KI GPE L PP   A +SL SREK+NPD LPA APA+NPS     FF LF   L  G  AGD  GALE      A   P
Subjt:  SASSFSRKAKSSRLINLGAKIEGPEFLLPPFIAAMTSLNSREKINPDKLPAIAPARNPSIQEIIFFALFFRCLGVGGVAGDAAGALEVGALAAALCVP

KAF2566560.1 hypothetical protein F2Q68_00027811 [Brassica cretica]5.3e-0850Show/hide
Query:  SSDASASSFSRKAKSSRLINLGAKIEGPEFLLPPFIAAMTSLNSREKINPDKLPAIAPARNPSIQEIIFFALFF
        S +AS SSFS+KAKSS L+  G KIEGPE    P IA   +L   EK  P+++P + P  NP I    FF LFF
Subjt:  SSDASASSFSRKAKSSRLINLGAKIEGPEFLLPPFIAAMTSLNSREKINPDKLPAIAPARNPSIQEIIFFALFF

KAF5757867.1 hypothetical protein HanXRQr2_Chr16g0722821 [Helianthus annuus]7.9e-0442.53Show/hide
Query:  GPEFLLPPFIAAMTSLNSREKINPDKLPAIAPARNPSIQEIIFFALFFRCL--GVGGVAGDAAGALEVGALAAALCVPFVLEFSANL
        GP+    P I    +LNS E I P  +PA AP  NP IQ +IFFAL   CL    G V GD AGA     L  +     V   SAN+
Subjt:  GPEFLLPPFIAAMTSLNSREKINPDKLPAIAPARNPSIQEIIFFALFFRCL--GVGGVAGDAAGALEVGALAAALCVPFVLEFSANL

TrEMBL top hitse value%identityAlignment
A0A4Y1RJ38 Leucine-rich repeat protein kinase family protein2.6e-1334.85Show/hide
Query:  RPEISNSSFHVVIKQNICRLQIPVNNTGGMVHVKILQPRCNSKSNVMAIVSLLLKPDSTYLASCHSSSIRTQGSGNQDEGHEPQEEEDSDAGFHPHSSDA
        +PEI NSSFH++IKQ+IC L+I +N+                                                                        +A
Subjt:  RPEISNSSFHVVIKQNICRLQIPVNNTGGMVHVKILQPRCNSKSNVMAIVSLLLKPDSTYLASCHSSSIRTQGSGNQDEGHEPQEEEDSDAGFHPHSSDA

Query:  SASSFSRKAKSSRLINLGAKIEGPEFLLPPFIAAMTSLNSREKINPDKLPAIAPARNPSIQEIIFFALFFRCLGVGGVAGDAAGALEVGALAAALCVP
        + SS SRKAKSS L+    KI GPE L PP   A +SL SREK+NPD LPA APA+NPS     FF LF   L  G  AGD  GALE      A   P
Subjt:  SASSFSRKAKSSRLINLGAKIEGPEFLLPPFIAAMTSLNSREKINPDKLPAIAPARNPSIQEIIFFALFFRCLGVGGVAGDAAGALEVGALAAALCVP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCAATTTTGAGGGCCAAGAGCATTTGCTCCTCCCAGCCATTTCCCAGGAGCTTCGGATGAATGGCTCCCCTAGGATTTTCCGAAGTCATAACATTCTTCATCCACT
TAACCAAACTCATCTCATCCGTCCCGAAATCAGCAATTCGAGCTTCCATGTCGTCATCAAGCAAAACATTTGCAGGCTTCAGATCCCTGTGAATAATACGGGGGGTATGG
TTCATGTGAAGATACTCCAGCCCAGATGCAACTCCAAGAGCAATGTTATGGCGATTGTTTCACTCCTGCTGAAACCTGATTCAACATATCTTGCAAGCTGCCATTCTTCA
TCAATTCGTACACAAGGTAGTGGCAATCAGGACGAGGGACATGAGCCACAAGAGGAAGAAGATTCCGATGCCGGATTTCACCCACACTCCAGCGATGCAAGCGCATCGTC
TTTCTCTAGAAAAGCCAAATCATCTCGTCTTATCAACTTAGGAGCAAAGATTGAGGGACCTGAATTCTTGCTTCCACCTTTTATAGCTGCTATGACGAGTTTAAACAGTA
GAGAAAAGATAAACCCTGACAAACTTCCAGCAATTGCTCCAGCGAGGAACCCAAGTATCCAAGAAATTATCTTCTTTGCCTTATTTTTCCGATGCTTAGGAGTAGGCGGT
GTCGCGGGAGATGCAGCTGGAGCACTCGAAGTTGGCGCTCTAGCGGCGGCTCTGTGCGTGCCTTTCGTACTGGAATTCTCAGCTAACTTATAA
mRNA sequenceShow/hide mRNA sequence
ATGAGCAATTTTGAGGGCCAAGAGCATTTGCTCCTCCCAGCCATTTCCCAGGAGCTTCGGATGAATGGCTCCCCTAGGATTTTCCGAAGTCATAACATTCTTCATCCACT
TAACCAAACTCATCTCATCCGTCCCGAAATCAGCAATTCGAGCTTCCATGTCGTCATCAAGCAAAACATTTGCAGGCTTCAGATCCCTGTGAATAATACGGGGGGTATGG
TTCATGTGAAGATACTCCAGCCCAGATGCAACTCCAAGAGCAATGTTATGGCGATTGTTTCACTCCTGCTGAAACCTGATTCAACATATCTTGCAAGCTGCCATTCTTCA
TCAATTCGTACACAAGGTAGTGGCAATCAGGACGAGGGACATGAGCCACAAGAGGAAGAAGATTCCGATGCCGGATTTCACCCACACTCCAGCGATGCAAGCGCATCGTC
TTTCTCTAGAAAAGCCAAATCATCTCGTCTTATCAACTTAGGAGCAAAGATTGAGGGACCTGAATTCTTGCTTCCACCTTTTATAGCTGCTATGACGAGTTTAAACAGTA
GAGAAAAGATAAACCCTGACAAACTTCCAGCAATTGCTCCAGCGAGGAACCCAAGTATCCAAGAAATTATCTTCTTTGCCTTATTTTTCCGATGCTTAGGAGTAGGCGGT
GTCGCGGGAGATGCAGCTGGAGCACTCGAAGTTGGCGCTCTAGCGGCGGCTCTGTGCGTGCCTTTCGTACTGGAATTCTCAGCTAACTTATAA
Protein sequenceShow/hide protein sequence
MSNFEGQEHLLLPAISQELRMNGSPRIFRSHNILHPLNQTHLIRPEISNSSFHVVIKQNICRLQIPVNNTGGMVHVKILQPRCNSKSNVMAIVSLLLKPDSTYLASCHSS
SIRTQGSGNQDEGHEPQEEEDSDAGFHPHSSDASASSFSRKAKSSRLINLGAKIEGPEFLLPPFIAAMTSLNSREKINPDKLPAIAPARNPSIQEIIFFALFFRCLGVGG
VAGDAAGALEVGALAAALCVPFVLEFSANL