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Lsi06G016120 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G016120
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr06:26464045..26467192
RNA-Seq ExpressionLsi06G016120
SyntenyLsi06G016120
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG5521933.1 hypothetical protein RHGRI_034226 [Rhododendron griersonianum]1.2e-0856.45Show/hide
Query:  ISSSLSVTQASIPSPSLVVIRTTTFLYGRLGLQTHDGFPHPKSASYTGNRHQLVKLQNSTSP
        +SS+   T ASIPSP  V ++TT FL G   + TH GFPHPKSASY GN H+LVK   + SP
Subjt:  ISSSLSVTQASIPSPSLVVIRTTTFLYGRLGLQTHDGFPHPKSASYTGNRHQLVKLQNSTSP
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGAATCTAATTCAGAATCTGGTTGGAAGGAAGCCATATCTTCTTCCTTGAGCGTTACCCAAGCCTCAATTCCATCGCCGTCTCTGGTTGTCATTAGAACAACTAC
ATTCTTGTACGGCCGGCTCGGACTGCAAACCCACGACGGTTTCCCCCACCCGAAGTCCGCTTCGTACACCGGAAACCGACACCAACTCGTGAAGTTACAGAACTCCACCT
CTCCACCGCCCGTCCCGCCGTGTTTCCCCATCTTGCTCCACATATGCGCCGGCACGCCAGCCTGCTCCTCTGCGACGGCGATGGCGAACCACCATAGGTTGCCGCAGGAG
TTTGGCGTTAATGGCGGATCCATCTTGCCGCGCAAGTTCACCGCGTGGACTGCGGCAAAGATTTTTGCGTTTTCTTGTTCTGAATGTGGGTTTATCTCCATGAATCGCTT
CCATAAGAATGCCGAAACGGCTTCCACTCTCGTCGGCGGCTTCTCTAGAGATCCGACAGTGGCTTCTTGCCGGAGTGCGGCTATGAACCTGATCGCTATCTCCTCGATTG
ATGGCCGCCCACTTTCTGACAAATACGGTAGCGGAAAATCCGTCGACGAGTTTATGAGCGATACACAGAGCAATCGCCAAGCCGCCGCAGTCGAACAAATTCAATCGGAT
GGCAAGGATTACATCTCTTCCGATCTCTGGTTCGGCCAAATTAGCGTAAGGCTCAAACGGCAGCAAACGGTGAAGGACTTTGAAATCAGGATTTTCCACCACTTCCGACA
GCTCGCAACCGACTCGCGCTTCAGAATATTCAACGCCTCTATCGTTACAGTCGACGGAATATCCCTCAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGATGGAATCTAATTCAGAATCTGGTTGGAAGGAAGCCATATCTTCTTCCTTGAGCGTTACCCAAGCCTCAATTCCATCGCCGTCTCTGGTTGTCATTAGAACAACTAC
ATTCTTGTACGGCCGGCTCGGACTGCAAACCCACGACGGTTTCCCCCACCCGAAGTCCGCTTCGTACACCGGAAACCGACACCAACTCGTGAAGTTACAGAACTCCACCT
CTCCACCGCCCGTCCCGCCGTGTTTCCCCATCTTGCTCCACATATGCGCCGGCACGCCAGCCTGCTCCTCTGCGACGGCGATGGCGAACCACCATAGGTTGCCGCAGGAG
TTTGGCGTTAATGGCGGATCCATCTTGCCGCGCAAGTTCACCGCGTGGACTGCGGCAAAGATTTTTGCGTTTTCTTGTTCTGAATGTGGGTTTATCTCCATGAATCGCTT
CCATAAGAATGCCGAAACGGCTTCCACTCTCGTCGGCGGCTTCTCTAGAGATCCGACAGTGGCTTCTTGCCGGAGTGCGGCTATGAACCTGATCGCTATCTCCTCGATTG
ATGGCCGCCCACTTTCTGACAAATACGGTAGCGGAAAATCCGTCGACGAGTTTATGAGCGATACACAGAGCAATCGCCAAGCCGCCGCAGTCGAACAAATTCAATCGGAT
GGCAAGGATTACATCTCTTCCGATCTCTGGTTCGGCCAAATTAGCGTAAGGCTCAAACGGCAGCAAACGGTGAAGGACTTTGAAATCAGGATTTTCCACCACTTCCGACA
GCTCGCAACCGACTCGCGCTTCAGAATATTCAACGCCTCTATCGTTACAGTCGACGGAATATCCCTCAATTGA
Protein sequenceShow/hide protein sequence
MMESNSESGWKEAISSSLSVTQASIPSPSLVVIRTTTFLYGRLGLQTHDGFPHPKSASYTGNRHQLVKLQNSTSPPPVPPCFPILLHICAGTPACSSATAMANHHRLPQE
FGVNGGSILPRKFTAWTAAKIFAFSCSECGFISMNRFHKNAETASTLVGGFSRDPTVASCRSAAMNLIAISSIDGRPLSDKYGSGKSVDEFMSDTQSNRQAAAVEQIQSD
GKDYISSDLWFGQISVRLKRQQTVKDFEIRIFHHFRQLATDSRFRIFNASIVTVDGISLN