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Lsi06G016230 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G016230
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr06:26559959..26561566
RNA-Seq ExpressionLsi06G016230
SyntenyLsi06G016230
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
A0A0A9KCL3 Uncharacterized protein3.8e-0634.78Show/hide
Query:  LFSINIPIPRRPVPWRNHLKDQRPSPRRLKRLRYLAFNFALRAVIVILRQPHFLHLLLPVLWAQHFEGFNRLRSLKRHFLAFIQTLPRKISFWSEDFFPG
        L  +++P  RRPVP R+ L+ +   PRRL+ L  +A           L  P     LL V   +H E    LR L+RH LA ++ + R+      D  PG
Subjt:  LFSINIPIPRRPVPWRNHLKDQRPSPRRLKRLRYLAFNFALRAVIVILRQPHFLHLLLPVLWAQHFEGFNRLRSLKRHFLAFIQTLPRKISFWSEDFFPG

Query:  RPTALNPVTLASFVL
        RP+ L+P T A  +L
Subjt:  RPTALNPVTLASFVL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCATACTCTTCTCTATCAACATCCCAATCCCTCGGAGGCCAGTCCCGTGGAGGAACCACTTGAAGGACCAGCGGCCTAGTCCACGTCGTCTCAAGAGGCTCCGGTA
TCTCGCCTTTAATTTCGCATTGCGTGCGGTAATAGTCATCCTCCGTCAACCCCATTTCCTCCATCTTCTGCTTCCGGTACTTTGGGCTCAACATTTTGAAGGCTTCAATC
GCCTCAGGAGTCTGAAGCGGCACTTCCTCGCCTTCATTCAAACTCTTCCGCGCAAAATCAGCTTCTGGAGTGAAGACTTCTTCCCAGGGCGCCCAACCGCGCTCAACCCA
GTTACGCTTGCGAGCTTCGTCCTCTGTTTCCTTGTCTTTCGGACCAAAGTTCTCGAGGAAGGACTCGTCCACAGGGAACTCGTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCATACTCTTCTCTATCAACATCCCAATCCCTCGGAGGCCAGTCCCGTGGAGGAACCACTTGAAGGACCAGCGGCCTAGTCCACGTCGTCTCAAGAGGCTCCGGTA
TCTCGCCTTTAATTTCGCATTGCGTGCGGTAATAGTCATCCTCCGTCAACCCCATTTCCTCCATCTTCTGCTTCCGGTACTTTGGGCTCAACATTTTGAAGGCTTCAATC
GCCTCAGGAGTCTGAAGCGGCACTTCCTCGCCTTCATTCAAACTCTTCCGCGCAAAATCAGCTTCTGGAGTGAAGACTTCTTCCCAGGGCGCCCAACCGCGCTCAACCCA
GTTACGCTTGCGAGCTTCGTCCTCTGTTTCCTTGTCTTTCGGACCAAAGTTCTCGAGGAAGGACTCGTCCACAGGGAACTCGTCTGA
Protein sequenceShow/hide protein sequence
MSILFSINIPIPRRPVPWRNHLKDQRPSPRRLKRLRYLAFNFALRAVIVILRQPHFLHLLLPVLWAQHFEGFNRLRSLKRHFLAFIQTLPRKISFWSEDFFPGRPTALNP
VTLASFVLCFLVFRTKVLEEGLVHRELV