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Lsi06G016300 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G016300
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionMonocarboxylate transporter 9
Genome locationchr06:26599839..26600585
RNA-Seq ExpressionLsi06G016300
SyntenyLsi06G016300
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057788.1 monocarboxylate transporter 9 [Cucumis melo var. makuwa]1.7e-1683.05Show/hide
Query:  YTARGIPIKSASEQLSKARSRAVSTERTILSPFTKEYRVLAAHSGIRLFLEGFLFGEAP
        Y  RG PIK AS+  SKARSRAV TERTILSPFTKEYRVLAA+SGIRLFLEGFL+GEAP
Subjt:  YTARGIPIKSASEQLSKARSRAVSTERTILSPFTKEYRVLAAHSGIRLFLEGFLFGEAP

KAB1214490.1 hypothetical protein CJ030_MR5G010380 [Morella rubra]8.8e-1071.43Show/hide
Query:  IKSASEQLSKARSRAVSTERTILSPFTKEYRVLAAHSGIRLFLEGFLFGEAPAVEM
        I+S     S +RSRAVSTERTILSPFTKEYRVLAA+SGIR FLE FLFGE   V +
Subjt:  IKSASEQLSKARSRAVSTERTILSPFTKEYRVLAAHSGIRLFLEGFLFGEAPAVEM

KAG8480455.1 hypothetical protein CXB51_025076 [Gossypium anomalum]1.3e-0872.55Show/hide
Query:  ASEQLSKARSRAVSTERTILSPFTKEYRVLAAHSGIRLFLEG-FLFGEAPA
        +  ++ K+RSRAVSTERTILSPFTKEYRVLAA+SGIRLFLE  FLF   P+
Subjt:  ASEQLSKARSRAVSTERTILSPFTKEYRVLAAHSGIRLFLEG-FLFGEAPA

KJB73689.1 hypothetical protein B456_011G243800 [Gossypium raimondii]3.4e-0981.25Show/hide
Query:  QLSKARSRAVSTERTILSPFTKEYRVLAAHSGIRLFLEG-FLFGEAPA
        QL K+RSRAVSTERTILSPFTKEYRVLAA+SGIRLFLE  FLF   P+
Subjt:  QLSKARSRAVSTERTILSPFTKEYRVLAAHSGIRLFLEG-FLFGEAPA

MBA0877873.1 hypothetical protein [Gossypium schwendimanii]7.5e-0961.97Show/hide
Query:  IKSASEQLSKARSRAVSTERTILSPFTKEYRVLAAHSGIRLFLEG-FLFGEAPAVEMIDWLSSLSALYFSG
        I  +  QL K RSR VSTERTILSPFTKEYRVLAAHSGI LFLE  FLF   P+       SS S   F+G
Subjt:  IKSASEQLSKARSRAVSTERTILSPFTKEYRVLAAHSGIRLFLEG-FLFGEAPAVEMIDWLSSLSALYFSG

TrEMBL top hitse value%identityAlignment
A0A0D2UXN6 Uncharacterized protein1.6e-0981.25Show/hide
Query:  QLSKARSRAVSTERTILSPFTKEYRVLAAHSGIRLFLEG-FLFGEAPA
        QL K+RSRAVSTERTILSPFTKEYRVLAA+SGIRLFLE  FLF   P+
Subjt:  QLSKARSRAVSTERTILSPFTKEYRVLAAHSGIRLFLEG-FLFGEAPA

A0A1R3K6E7 Monocarboxylate transporter 96.2e-0979.17Show/hide
Query:  LSKARSRAVSTERTILSPFTKEYRVLAAHSGIRLFLEG-FLFGEAPAV
        + KARSRAVSTERTILSPFTKEYRVLAA SGIRLFL G F FG  P++
Subjt:  LSKARSRAVSTERTILSPFTKEYRVLAAHSGIRLFLEG-FLFGEAPAV

A0A5A7URK2 Monocarboxylate transporter 98.0e-1783.05Show/hide
Query:  YTARGIPIKSASEQLSKARSRAVSTERTILSPFTKEYRVLAAHSGIRLFLEGFLFGEAP
        Y  RG PIK AS+  SKARSRAV TERTILSPFTKEYRVLAA+SGIRLFLEGFL+GEAP
Subjt:  YTARGIPIKSASEQLSKARSRAVSTERTILSPFTKEYRVLAAHSGIRLFLEGFLFGEAP

A0A6A1VV19 Uncharacterized protein4.3e-1071.43Show/hide
Query:  IKSASEQLSKARSRAVSTERTILSPFTKEYRVLAAHSGIRLFLEGFLFGEAPAVEM
        I+S     S +RSRAVSTERTILSPFTKEYRVLAA+SGIR FLE FLFGE   V +
Subjt:  IKSASEQLSKARSRAVSTERTILSPFTKEYRVLAAHSGIRLFLEGFLFGEAPAVEM

A0A7J9N3H8 Uncharacterized protein (Fragment)3.6e-0961.97Show/hide
Query:  IKSASEQLSKARSRAVSTERTILSPFTKEYRVLAAHSGIRLFLEG-FLFGEAPAVEMIDWLSSLSALYFSG
        I  +  QL K RSR VSTERTILSPFTKEYRVLAAHSGI LFLE  FLF   P+       SS S   F+G
Subjt:  IKSASEQLSKARSRAVSTERTILSPFTKEYRVLAAHSGIRLFLEG-FLFGEAPAVEMIDWLSSLSALYFSG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TATACCGCAAGAGGCATTCCTATAAAAAGCGCATCCGAGCAGCTGAGTAAAGCACGGAGCCGTGCGGTGAGCACAGAGCGAACTATTCTTTCGCCTTTTACTAAAGAATA
CCGTGTGCTCGCCGCTCATAGCGGCATACGCCTATTTTTGGAGGGGTTTCTCTTTGGGGAAGCTCCTGCAGTTGAAATGATCGATTGGCTGTCATCTCTCAGTGCCCTAT
ATTTTAGTGGGAAATCGTAA
mRNA sequenceShow/hide mRNA sequence
TATACCGCAAGAGGCATTCCTATAAAAAGCGCATCCGAGCAGCTGAGTAAAGCACGGAGCCGTGCGGTGAGCACAGAGCGAACTATTCTTTCGCCTTTTACTAAAGAATA
CCGTGTGCTCGCCGCTCATAGCGGCATACGCCTATTTTTGGAGGGGTTTCTCTTTGGGGAAGCTCCTGCAGTTGAAATGATCGATTGGCTGTCATCTCTCAGTGCCCTAT
ATTTTAGTGGGAAATCGTAAAAGCACACTTGGCCTTAAACTTGGAGCCTGCTGTAATATTTGGTTTTAACCATTTTATAATAGAAGGTGATTGCCACTGCCCTTGAAAGC
AACATGTCGTAGGTAGATGTAAGGCTGGCTTAATTTAGATACCAGCAAAAATGTGCCATTGAAATTGTAAAAACATTTGTAATCTGTGTGAGAGTTAATGCTTGATTGGT
ATAAAAAAAATGAAACAGGGGTTGTGAGACTGAGCGAGCTAAGCAAAAAGGCAACAGCCAAGTGGGGGTAGAAGCTTGAAAGTATTATCTACTGAAAGAACTATGTGGGA
GATGCTTTTTATAAGGATTTTGATTCGATGATCCTAAGTTTCTCAACACAGTTTTAATTTTCAAAGT
Protein sequenceShow/hide protein sequence
YTARGIPIKSASEQLSKARSRAVSTERTILSPFTKEYRVLAAHSGIRLFLEGFLFGEAPAVEMIDWLSSLSALYFSGKS