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Lsi06G016520 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G016520
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr06:26799832..26800563
RNA-Seq ExpressionLsi06G016520
SyntenyLsi06G016520
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057761.1 hypothetical protein E6C27_scaffold274G00440 [Cucumis melo var. makuwa]3.0e-6975.12Show/hide
Query:  MLPRS-EPEDDLISSLNRHGTPSSTWNIRTNELAHDEIRRERRAAIASGNFKARRLSYDDAVDLSLPL-NTDFLHGDYLNGFLQ-DQI---QSSDSAEEK
        MLP S + ED+LISSLNRHGTP S W IRTN+LA+D+IRRERRAAIASGN K RRLSYDDAVD+SL L NTDFLHGDYL+ F Q DQI    SSDS EEK
Subjt:  MLPRS-EPEDDLISSLNRHGTPSSTWNIRTNELAHDEIRRERRAAIASGNFKARRLSYDDAVDLSLPL-NTDFLHGDYLNGFLQ-DQI---QSSDSAEEK

Query:  TEQVPVCLNTLSYSSASSSSSSSSGSFVPPQMKEQIA--AKVEVNVTPIVGEKR-EIGNRCKIGKWEVGLAWLAIASVAMIIFSLRCLGFGEYEEEQFPF
         EQVPVCLN LSYS ASSSSSSSSG  VPPQ KE++A  AKVE NVT IVGEK+ E  N CKIGKW+VGLAWLA+ASV M++FSLRCLGF + E+EQFPF
Subjt:  TEQVPVCLNTLSYSSASSSSSSSSGSFVPPQMKEQIA--AKVEVNVTPIVGEKR-EIGNRCKIGKWEVGLAWLAIASVAMIIFSLRCLGFGEYEEEQFPF

Query:  LLVPT
        LLVPT
Subjt:  LLVPT

KAF3970664.1 hypothetical protein CMV_005667 [Castanea mollissima]1.2e-1232.8Show/hide
Query:  IQQQFFQLQRHW-----NHCK------ASSNHRSPSPTMLPRSEPEDDLISSLNRHGTPSSTWNIRTNELAHDEIRRERRAAIASGNFKARRLSYDDAVD
        +Q QF  LQ+ W     +H K       +SNH + S   L  S P   + S   R   P   W +RTN+LA +EIRRER+A I SG  K RRL   D  +
Subjt:  IQQQFFQLQRHW-----NHCK------ASSNHRSPSPTMLPRSEPEDDLISSLNRHGTPSSTWNIRTNELAHDEIRRERRAAIASGNFKARRLSYDDAVD

Query:  LSLPLNTDFLHGDYL-NGFLQDQ-------IQSSDSAEEKTEQ-------VPVCLNTLSYSSASSSSSSSSGSFVPPQMKEQIAAKVEVNVTPIVGEKRE
              T F   + + NG  Q+          S D  + + E        +P+C      SS+SS SS SS S     +K ++  + E  V   V  +R+
Subjt:  LSLPLNTDFLHGDYL-NGFLQDQ-------IQSSDSAEEKTEQ-------VPVCLNTLSYSSASSSSSSSSGSFVPPQMKEQIAAKVEVNVTPIVGEKRE

Query:  -IGNRCKIGKWEVGLAWLAIASVAMIIFSLRCLGFGEYEEEQFPFLLVPT
          G      +W V + WLAIAS+   I  +R   FG Y +E    +LVPT
Subjt:  -IGNRCKIGKWEVGLAWLAIASVAMIIFSLRCLGFGEYEEEQFPFLLVPT

KAG6589372.1 hypothetical protein SDJN03_14795, partial [Cucurbita argyrosperma subsp. sororia]2.6e-6066.82Show/hide
Query:  SEPEDDLISSLNRHGT----PSSTWNIRTNELAHDEIRRERRAAIASGNFKARRLSYDDAVDLSLPLNTDFLHGDYLNGFLQDQI-----QSSDSA----
        S PEDDLISSL+RHGT     SSTW IRTNELA DEI RERRAA+  G F  RRLS+DD VD+   LNT+ LHG+Y NGF+QDQI     QSSDS+    
Subjt:  SEPEDDLISSLNRHGT----PSSTWNIRTNELAHDEIRRERRAAIASGNFKARRLSYDDAVDLSLPLNTDFLHGDYLNGFLQDQI-----QSSDSA----

Query:  ------EEKTEQVPVCLNTLSYSSASSSSSSSSGSFVPPQMKEQIAAKVEVNVTPIVGEKREIGNRCKIGKWEVGLAWLAIASVAMIIFSLRCLGFGEYE
              EE+ E+VPVCLN LSYSSASSSSSSSSGSF PPQ+KE      E NV   VG KREIGNRC+IG WEVGLA LAIASV M+IFS RCL FG YE
Subjt:  ------EEKTEQVPVCLNTLSYSSASSSSSSSSGSFVPPQMKEQIAAKVEVNVTPIVGEKREIGNRCKIGKWEVGLAWLAIASVAMIIFSLRCLGFGEYE

Query:  EEQFPFLLVPT
        EE+ PFLLVPT
Subjt:  EEQFPFLLVPT

KGN63472.1 hypothetical protein Csa_014116 [Cucumis sativus]2.9e-5970.24Show/hide
Query:  MLPRSEPEDD--LISSLNRHGTPSSTWNIRTNELAHDEIRRERRAAIASGNFKARRLSYDDAVDLSLPLNTDF-LHGDYLNGFLQD---QIQSSDSAEEK
        MLP S+ E+D  LIS+LNRH TPSS+W IRTN+LA++EIR ERRAAIASGN KARRLSYDDA+D+SL LNT+F LHGDYL+   QD    I SSD  EEK
Subjt:  MLPRSEPEDD--LISSLNRHGTPSSTWNIRTNELAHDEIRRERRAAIASGNFKARRLSYDDAVDLSLPLNTDF-LHGDYLNGFLQD---QIQSSDSAEEK

Query:  TEQVPVCLNTLSYSSASSSSSSSSGSFVPPQMKEQIAAKVEV--NVTPIVGE-KREIGNRCKIGKWEVGLAWLAIASVAMIIFSLRCLGFGEYEEEQFPF
         EQ  VCLN LSYS A  SSSSSSG FVP QMKEQ+AAK EV  NV  +VGE K E  N CKIG W+VGLA LAIASV M+IFSLRCLG  + EEEQFPF
Subjt:  TEQVPVCLNTLSYSSASSSSSSSSGSFVPPQMKEQIAAKVEV--NVTPIVGE-KREIGNRCKIGKWEVGLAWLAIASVAMIIFSLRCLGFGEYEEEQFPF

Query:  LLVPT
        LLVPT
Subjt:  LLVPT

TYJ98442.1 hypothetical protein E5676_scaffold350G00430 [Cucumis melo var. makuwa]2.4e-6673.43Show/hide
Query:  MLPRS-EPEDDLISSLNRHGTPSSTWNIRTNELAHDEIRRERRAAIASGNFKARRLSYDDAVDLSLPL-NTDFLHGDYLNGF--LQDQI---QSSDSAEE
        MLP S + ED+LISSLNRHGTP S W IRTN+LA+D+IRRERRAAIASGN K RRLSYDDAVD+SL L NTDFLHGDYL+ F    DQI    SSDS EE
Subjt:  MLPRS-EPEDDLISSLNRHGTPSSTWNIRTNELAHDEIRRERRAAIASGNFKARRLSYDDAVDLSLPL-NTDFLHGDYLNGF--LQDQI---QSSDSAEE

Query:  KTEQVPVCLNTLSYSSA-SSSSSSSSGSFVPPQMKEQIA--AKVEVNVTPIVGEKR-EIGNRCKIGKWEVGLAWLAIASVAMIIFSLRCLGFGEYEEEQF
        K EQVPVCLN LSYS A SSSSSSSSG  VPPQ KE++A  AKVE NVT IVGEK+ E  N CKIGKW+VGLAWLA+ASV M++FSLRCL F + E+EQF
Subjt:  KTEQVPVCLNTLSYSSA-SSSSSSSSGSFVPPQMKEQIA--AKVEVNVTPIVGEKR-EIGNRCKIGKWEVGLAWLAIASVAMIIFSLRCLGFGEYEEEQF

Query:  PFLLVPT
        PFLLVPT
Subjt:  PFLLVPT

TrEMBL top hitse value%identityAlignment
A0A0A0LRR5 Uncharacterized protein1.4e-5970.24Show/hide
Query:  MLPRSEPEDD--LISSLNRHGTPSSTWNIRTNELAHDEIRRERRAAIASGNFKARRLSYDDAVDLSLPLNTDF-LHGDYLNGFLQD---QIQSSDSAEEK
        MLP S+ E+D  LIS+LNRH TPSS+W IRTN+LA++EIR ERRAAIASGN KARRLSYDDA+D+SL LNT+F LHGDYL+   QD    I SSD  EEK
Subjt:  MLPRSEPEDD--LISSLNRHGTPSSTWNIRTNELAHDEIRRERRAAIASGNFKARRLSYDDAVDLSLPLNTDF-LHGDYLNGFLQD---QIQSSDSAEEK

Query:  TEQVPVCLNTLSYSSASSSSSSSSGSFVPPQMKEQIAAKVEV--NVTPIVGE-KREIGNRCKIGKWEVGLAWLAIASVAMIIFSLRCLGFGEYEEEQFPF
         EQ  VCLN LSYS A  SSSSSSG FVP QMKEQ+AAK EV  NV  +VGE K E  N CKIG W+VGLA LAIASV M+IFSLRCLG  + EEEQFPF
Subjt:  TEQVPVCLNTLSYSSASSSSSSSSGSFVPPQMKEQIAAKVEV--NVTPIVGE-KREIGNRCKIGKWEVGLAWLAIASVAMIIFSLRCLGFGEYEEEQFPF

Query:  LLVPT
        LLVPT
Subjt:  LLVPT

A0A5A7UWC4 Uncharacterized protein1.5e-6975.12Show/hide
Query:  MLPRS-EPEDDLISSLNRHGTPSSTWNIRTNELAHDEIRRERRAAIASGNFKARRLSYDDAVDLSLPL-NTDFLHGDYLNGFLQ-DQI---QSSDSAEEK
        MLP S + ED+LISSLNRHGTP S W IRTN+LA+D+IRRERRAAIASGN K RRLSYDDAVD+SL L NTDFLHGDYL+ F Q DQI    SSDS EEK
Subjt:  MLPRS-EPEDDLISSLNRHGTPSSTWNIRTNELAHDEIRRERRAAIASGNFKARRLSYDDAVDLSLPL-NTDFLHGDYLNGFLQ-DQI---QSSDSAEEK

Query:  TEQVPVCLNTLSYSSASSSSSSSSGSFVPPQMKEQIA--AKVEVNVTPIVGEKR-EIGNRCKIGKWEVGLAWLAIASVAMIIFSLRCLGFGEYEEEQFPF
         EQVPVCLN LSYS ASSSSSSSSG  VPPQ KE++A  AKVE NVT IVGEK+ E  N CKIGKW+VGLAWLA+ASV M++FSLRCLGF + E+EQFPF
Subjt:  TEQVPVCLNTLSYSSASSSSSSSSGSFVPPQMKEQIA--AKVEVNVTPIVGEKR-EIGNRCKIGKWEVGLAWLAIASVAMIIFSLRCLGFGEYEEEQFPF

Query:  LLVPT
        LLVPT
Subjt:  LLVPT

A0A5D3BFC1 Uncharacterized protein1.2e-6673.43Show/hide
Query:  MLPRS-EPEDDLISSLNRHGTPSSTWNIRTNELAHDEIRRERRAAIASGNFKARRLSYDDAVDLSLPL-NTDFLHGDYLNGF--LQDQI---QSSDSAEE
        MLP S + ED+LISSLNRHGTP S W IRTN+LA+D+IRRERRAAIASGN K RRLSYDDAVD+SL L NTDFLHGDYL+ F    DQI    SSDS EE
Subjt:  MLPRS-EPEDDLISSLNRHGTPSSTWNIRTNELAHDEIRRERRAAIASGNFKARRLSYDDAVDLSLPL-NTDFLHGDYLNGF--LQDQI---QSSDSAEE

Query:  KTEQVPVCLNTLSYSSA-SSSSSSSSGSFVPPQMKEQIA--AKVEVNVTPIVGEKR-EIGNRCKIGKWEVGLAWLAIASVAMIIFSLRCLGFGEYEEEQF
        K EQVPVCLN LSYS A SSSSSSSSG  VPPQ KE++A  AKVE NVT IVGEK+ E  N CKIGKW+VGLAWLA+ASV M++FSLRCL F + E+EQF
Subjt:  KTEQVPVCLNTLSYSSA-SSSSSSSSGSFVPPQMKEQIA--AKVEVNVTPIVGEKR-EIGNRCKIGKWEVGLAWLAIASVAMIIFSLRCLGFGEYEEEQF

Query:  PFLLVPT
        PFLLVPT
Subjt:  PFLLVPT

A0A7N2MM31 Uncharacterized protein9.7e-1331.85Show/hide
Query:  IQQQFFQLQRHWNHCKAS-----------SNHRSPSPTMLPRSEPEDDLISSLNRHGTPSSTWNIRTNELAHDEIRRERRAAIASGNFKARRLSYDDAVD
        +Q QF  LQ  W+    S           SNH + S   L  S P   + S   R   P   W +RTN+LA +EIRRER+A I SG  K RRL   D  +
Subjt:  IQQQFFQLQRHWNHCKAS-----------SNHRSPSPTMLPRSEPEDDLISSLNRHGTPSSTWNIRTNELAHDEIRRERRAAIASGNFKARRLSYDDAVD

Query:  LSLPLNTDFLHGDYLNGFLQD----QIQSSDSAEEKTEQ---------VPVCLNTLSYSSASSSSSSSSGSFVPPQMKEQIAAKVEVNVTPIVGEKRE-I
          +            NG  Q+     +   DS ++  E          +PVC      SS+SS SS SS S     +K ++  + E  V   V  +R+  
Subjt:  LSLPLNTDFLHGDYLNGFLQD----QIQSSDSAEEKTEQ---------VPVCLNTLSYSSASSSSSSSSGSFVPPQMKEQIAAKVEVNVTPIVGEKRE-I

Query:  GNRCKIGKWEVGLAWLAIASVAMIIFSLRCLGFGEYEEEQFPFLLVPT
        G      +W V + WLAIAS+   I  +    FG Y +E    +LVPT
Subjt:  GNRCKIGKWEVGLAWLAIASVAMIIFSLRCLGFGEYEEEQFPFLLVPT

M5W9W6 Uncharacterized protein1.6e-1030.95Show/hide
Query:  IQQQFFQLQRHWNHCKASS-------NHRSPSPTMLPRSEPEDD-----LISSLNRHGTPS-STWNIRTNELAHDEIRRERRAAIASGNFKARRLSYDDA
        +Q+QF  LQ+ W+  K S+       +  S S TM+   +   D     L+SSL    +PS   W +RTN+L  +EIRRERRAAI SG  K RRL   +A
Subjt:  IQQQFFQLQRHWNHCKASS-------NHRSPSPTMLPRSEPEDD-----LISSLNRHGTPS-STWNIRTNELAHDEIRRERRAAIASGNFKARRLSYDDA

Query:  VDLSLPLNTDFLHGDYL--NGFLQ----------DQIQSSDSAEEKTEQVPVCLNTLSYSSASSSSSSSSGSFVPPQMKEQIAAKVEVNVTPIVGEKREI
         +    +      G +   NG  Q          D     D    K++++ VC     +   S +SSSSS S     ++ ++  ++E  +  +  E++ +
Subjt:  VDLSLPLNTDFLHGDYL--NGFLQ----------DQIQSSDSAEEKTEQVPVCLNTLSYSSASSSSSSSSGSFVPPQMKEQIAAKVEVNVTPIVGEKREI

Query:  GNRCKIGKWEVGLA----WLAIASVAMIIFSLRCLGFGEYEEEQFPFLLVPT
         N+ + G     +A    WLAIA +   IF +R  GF EY       +LVPT
Subjt:  GNRCKIGKWEVGLA----WLAIASVAMIIFSLRCLGFGEYEEEQFPFLLVPT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGACGACGAACAAACCCCCAATATTTCTTCTCTAAAATCTAACAACAATCTTCATATTCAGCAGCAGTTCTTCCAATTGCAGCGCCATTGGAATCACTGCAAAGC
TTCTTCCAACCACCGTTCACCCTCTCCCACAATGCTCCCCCGATCAGAACCAGAAGACGATCTCATCTCCTCCCTCAACCGCCATGGCACTCCATCATCCACTTGGAACA
TCCGAACCAACGAGTTGGCTCACGACGAGATTCGTAGAGAACGAAGGGCCGCCATTGCTAGCGGCAACTTCAAGGCCCGAAGGCTTTCTTATGATGATGCCGTCGACCTG
TCTCTTCCCCTAAATACCGACTTCTTACATGGGGATTACTTGAATGGCTTTCTTCAGGATCAGATTCAGTCCTCCGATTCGGCCGAAGAAAAAACAGAACAAGTTCCTGT
TTGTTTAAATACTCTGTCTTATTCCTCTGCTTCCTCCTCCTCTTCTTCTTCTTCAGGCTCATTTGTTCCTCCCCAAATGAAAGAACAAATCGCCGCCAAGGTAGAAGTAA
ATGTGACGCCGATTGTTGGTGAGAAGAGGGAAATTGGGAATCGGTGCAAAATAGGAAAGTGGGAAGTGGGTTTAGCTTGGCTTGCCATTGCGTCGGTTGCTATGATTATA
TTTTCACTACGTTGTTTAGGGTTTGGAGAATATGAGGAAGAACAATTTCCATTTCTTTTAGTTCCAACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGACGACGAACAAACCCCCAATATTTCTTCTCTAAAATCTAACAACAATCTTCATATTCAGCAGCAGTTCTTCCAATTGCAGCGCCATTGGAATCACTGCAAAGC
TTCTTCCAACCACCGTTCACCCTCTCCCACAATGCTCCCCCGATCAGAACCAGAAGACGATCTCATCTCCTCCCTCAACCGCCATGGCACTCCATCATCCACTTGGAACA
TCCGAACCAACGAGTTGGCTCACGACGAGATTCGTAGAGAACGAAGGGCCGCCATTGCTAGCGGCAACTTCAAGGCCCGAAGGCTTTCTTATGATGATGCCGTCGACCTG
TCTCTTCCCCTAAATACCGACTTCTTACATGGGGATTACTTGAATGGCTTTCTTCAGGATCAGATTCAGTCCTCCGATTCGGCCGAAGAAAAAACAGAACAAGTTCCTGT
TTGTTTAAATACTCTGTCTTATTCCTCTGCTTCCTCCTCCTCTTCTTCTTCTTCAGGCTCATTTGTTCCTCCCCAAATGAAAGAACAAATCGCCGCCAAGGTAGAAGTAA
ATGTGACGCCGATTGTTGGTGAGAAGAGGGAAATTGGGAATCGGTGCAAAATAGGAAAGTGGGAAGTGGGTTTAGCTTGGCTTGCCATTGCGTCGGTTGCTATGATTATA
TTTTCACTACGTTGTTTAGGGTTTGGAGAATATGAGGAAGAACAATTTCCATTTCTTTTAGTTCCAACTTGA
Protein sequenceShow/hide protein sequence
MEDDEQTPNISSLKSNNNLHIQQQFFQLQRHWNHCKASSNHRSPSPTMLPRSEPEDDLISSLNRHGTPSSTWNIRTNELAHDEIRRERRAAIASGNFKARRLSYDDAVDL
SLPLNTDFLHGDYLNGFLQDQIQSSDSAEEKTEQVPVCLNTLSYSSASSSSSSSSGSFVPPQMKEQIAAKVEVNVTPIVGEKREIGNRCKIGKWEVGLAWLAIASVAMII
FSLRCLGFGEYEEEQFPFLLVPT