; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi06G016610 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G016610
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionPseudouridine synthase
Genome locationchr06:26881166..26886981
RNA-Seq ExpressionLsi06G016610
SyntenyLsi06G016610
Gene Ontology termsGO:0000455 - enzyme-directed rRNA pseudouridine synthesis (biological process)
GO:0003723 - RNA binding (molecular function)
GO:0009982 - pseudouridine synthase activity (molecular function)
InterPro domainsIPR006145 - Pseudouridine synthase, RsuA/RluA-like
IPR020103 - Pseudouridine synthase, catalytic domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057752.1 RNA pseudouridine synthase 7 isoform X1 [Cucumis melo var. makuwa]2.0e-11376.21Show/hide
Query:  RHVRPYYFEFIAHVKNRWAGKTIVDLFAEEFKGRPYEYYVDAVKCGRIQVDGEMVPASYIVKSSQKISHFLHRHEPPVMAWGVKILKEEAEVLTVCKPAS
        RHVRPYYFEFIAHVKNRWAGKTIVDLFAEEFKGRPYEYYVDAVKCGRIQVDGE+VP SYIVKSSQKISHFLHRHEPPVMAWGVK+LKEEAEVLTVCKPAS
Subjt:  RHVRPYYFEFIAHVKNRWAGKTIVDLFAEEFKGRPYEYYVDAVKCGRIQVDGEMVPASYIVKSSQKISHFLHRHEPPVMAWGVKILKEEAEVLTVCKPAS

Query:  VP------------------------------------------------------IESGLVKKQYVARVVGVFPEKEQVVDVNINYNAREGRSTAE-MV
        VP                                                      IESGLVKKQY+ARVVGVFPE+EQVVD NINYNAREGRSTAE MV
Subjt:  VP------------------------------------------------------IESGLVKKQYVARVVGVFPEKEQVVDVNINYNAREGRSTAE-MV

Query:  DSSTDTPTKGKAAQTKFTRISSDGVHSIVLCEPITGRTHQIRVHLQYTGYPIANDALYLTKEASDRSVEKTTADRAAAISTCSPAHTTEK
        DSSTDTPTKGKAAQTKFTRISS+GVHSIVLCEPITGRTHQIRVHLQYTGYPIANDALYLTKEAS RSV+KTTADRAAAIS+CSPA   E+
Subjt:  DSSTDTPTKGKAAQTKFTRISSDGVHSIVLCEPITGRTHQIRVHLQYTGYPIANDALYLTKEASDRSVEKTTADRAAAISTCSPAHTTEK

XP_008464394.1 PREDICTED: RNA pseudouridine synthase 7 isoform X1 [Cucumis melo]2.0e-11376.21Show/hide
Query:  RHVRPYYFEFIAHVKNRWAGKTIVDLFAEEFKGRPYEYYVDAVKCGRIQVDGEMVPASYIVKSSQKISHFLHRHEPPVMAWGVKILKEEAEVLTVCKPAS
        RHVRPYYFEFIAHVKNRWAGKTIVDLFAEEFKGRPYEYYVDAVKCGRIQVDGE+VP SYIVKSSQKISHFLHRHEPPVMAWGVK+LKEEAEVLTVCKPAS
Subjt:  RHVRPYYFEFIAHVKNRWAGKTIVDLFAEEFKGRPYEYYVDAVKCGRIQVDGEMVPASYIVKSSQKISHFLHRHEPPVMAWGVKILKEEAEVLTVCKPAS

Query:  VP------------------------------------------------------IESGLVKKQYVARVVGVFPEKEQVVDVNINYNAREGRSTAE-MV
        VP                                                      IESGLVKKQY+ARVVGVFPE+EQVVD NINYNAREGRSTAE MV
Subjt:  VP------------------------------------------------------IESGLVKKQYVARVVGVFPEKEQVVDVNINYNAREGRSTAE-MV

Query:  DSSTDTPTKGKAAQTKFTRISSDGVHSIVLCEPITGRTHQIRVHLQYTGYPIANDALYLTKEASDRSVEKTTADRAAAISTCSPAHTTEK
        DSSTDTPTKGKAAQTKFTRISS+GVHSIVLCEPITGRTHQIRVHLQYTGYPIANDALYLTKEAS RSV+KTTADRAAAIS+CSPA   E+
Subjt:  DSSTDTPTKGKAAQTKFTRISSDGVHSIVLCEPITGRTHQIRVHLQYTGYPIANDALYLTKEASDRSVEKTTADRAAAISTCSPAHTTEK

XP_008464395.1 PREDICTED: RNA pseudouridine synthase 7 isoform X2 [Cucumis melo]7.9e-11576.47Show/hide
Query:  RHVRPYYFEFIAHVKNRWAGKTIVDLFAEEFKGRPYEYYVDAVKCGRIQVDGEMVPASYIVKSSQKISHFLHRHEPPVMAWGVKILKEEAEVLTVCKPAS
        RHVRPYYFEFIAHVKNRWAGKTIVDLFAEEFKGRPYEYYVDAVKCGRIQVDGE+VP SYIVKSSQKISHFLHRHEPPVMAWGVK+LKEEAEVLTVCKPAS
Subjt:  RHVRPYYFEFIAHVKNRWAGKTIVDLFAEEFKGRPYEYYVDAVKCGRIQVDGEMVPASYIVKSSQKISHFLHRHEPPVMAWGVKILKEEAEVLTVCKPAS

Query:  VP------------------------------------------------------IESGLVKKQYVARVVGVFPEKEQVVDVNINYNAREGRSTAEMVD
        VP                                                      IESGLVKKQY+ARVVGVFPE+EQVVD NINYNAREGRSTAEMVD
Subjt:  VP------------------------------------------------------IESGLVKKQYVARVVGVFPEKEQVVDVNINYNAREGRSTAEMVD

Query:  SSTDTPTKGKAAQTKFTRISSDGVHSIVLCEPITGRTHQIRVHLQYTGYPIANDALYLTKEASDRSVEKTTADRAAAISTCSPAHTTEK
        SSTDTPTKGKAAQTKFTRISS+GVHSIVLCEPITGRTHQIRVHLQYTGYPIANDALYLTKEAS RSV+KTTADRAAAIS+CSPA   E+
Subjt:  SSTDTPTKGKAAQTKFTRISSDGVHSIVLCEPITGRTHQIRVHLQYTGYPIANDALYLTKEASDRSVEKTTADRAAAISTCSPAHTTEK

XP_022134653.1 RNA pseudouridine synthase 7 isoform X1 [Momordica charantia]1.0e-11765.33Show/hide
Query:  RHVRPYYFEFIAHVKNRWAGKTIVDLFAEEFKGRPYEYYV---------DAVKCGRIQVDGEMVPASYIVKSSQKISHFLHRHEPPVMAWGVKILKEEAE
        RHVRPYYFEFIAHVKNRWAGKTIVDLFAEEFKGRPYEYYV         DAVKCGRIQVDGE+VP SYIV+SSQKISHFLHRHEPPVMA  VKILKEEA+
Subjt:  RHVRPYYFEFIAHVKNRWAGKTIVDLFAEEFKGRPYEYYV---------DAVKCGRIQVDGEMVPASYIVKSSQKISHFLHRHEPPVMAWGVKILKEEAE

Query:  VLTVCKPASVP------------------------------------------------------IESGLVKKQYVARVVGVFPEKEQVVDVNINYNARE
        VLTVCKPASVP                                                      IESGLVKKQY+ARVVGVFPEKEQ+VDVNINYNARE
Subjt:  VLTVCKPASVP------------------------------------------------------IESGLVKKQYVARVVGVFPEKEQVVDVNINYNARE

Query:  GRSTAEMVDSSTDTPTKGKAAQTKFTRISSDGVHSIVLCEPITGRTHQIRVHLQYTGYPIANDALYLTKEASDRSVEKTTADRAAA-----------IST
        GRSTAEMVDS +D  TKGK AQTKFTRISSDG+HSIVLCEPITGRTHQIRVHLQY+GYPIANDALYLTKEAS RSVE+T ADRAAA           +  
Subjt:  GRSTAEMVDSSTDTPTKGKAAQTKFTRISSDGVHSIVLCEPITGRTHQIRVHLQYTGYPIANDALYLTKEASDRSVEKTTADRAAA-----------IST

Query:  C-SPAHTTEKKRVCGCIVFSILDQDGSTNAHIQNGLHFNSLFFSDPPLFLLSPYSMMNIVTNADYGTDGTAILEG
        C   + T E KRV GCIVF ILDQDGSTNAHIQNGLHFN+      P   L   SM+     + +   G AILEG
Subjt:  C-SPAHTTEKKRVCGCIVFSILDQDGSTNAHIQNGLHFNSLFFSDPPLFLLSPYSMMNIVTNADYGTDGTAILEG

XP_022134654.1 RNA pseudouridine synthase 7 isoform X2 [Momordica charantia]6.3e-12066.67Show/hide
Query:  RHVRPYYFEFIAHVKNRWAGKTIVDLFAEEFKGRPYEYYVDAVKCGRIQVDGEMVPASYIVKSSQKISHFLHRHEPPVMAWGVKILKEEAEVLTVCKPAS
        RHVRPYYFEFIAHVKNRWAGKTIVDLFAEEFKGRPYEYY+DAVKCGRIQVDGE+VP SYIV+SSQKISHFLHRHEPPVMA  VKILKEEA+VLTVCKPAS
Subjt:  RHVRPYYFEFIAHVKNRWAGKTIVDLFAEEFKGRPYEYYVDAVKCGRIQVDGEMVPASYIVKSSQKISHFLHRHEPPVMAWGVKILKEEAEVLTVCKPAS

Query:  VP------------------------------------------------------IESGLVKKQYVARVVGVFPEKEQVVDVNINYNAREGRSTAEMVD
        VP                                                      IESGLVKKQY+ARVVGVFPEKEQ+VDVNINYNAREGRSTAEMVD
Subjt:  VP------------------------------------------------------IESGLVKKQYVARVVGVFPEKEQVVDVNINYNAREGRSTAEMVD

Query:  SSTDTPTKGKAAQTKFTRISSDGVHSIVLCEPITGRTHQIRVHLQYTGYPIANDALYLTKEASDRSVEKTTADRAAA-----------ISTC-SPAHTTE
        S +D  TKGK AQTKFTRISSDG+HSIVLCEPITGRTHQIRVHLQY+GYPIANDALYLTKEAS RSVE+T ADRAAA           +  C   + T E
Subjt:  SSTDTPTKGKAAQTKFTRISSDGVHSIVLCEPITGRTHQIRVHLQYTGYPIANDALYLTKEASDRSVEKTTADRAAA-----------ISTC-SPAHTTE

Query:  KKRVCGCIVFSILDQDGSTNAHIQNGLHFNSLFFSDPPLFLLSPYSMMNIVTNADYGTDGTAILEG
         KRV GCIVF ILDQDGSTNAHIQNGLHFN+      P   L   SM+     + +   G AILEG
Subjt:  KKRVCGCIVFSILDQDGSTNAHIQNGLHFNSLFFSDPPLFLLSPYSMMNIVTNADYGTDGTAILEG

TrEMBL top hitse value%identityAlignment
A0A1S3CLD1 Pseudouridine synthase3.8e-11576.47Show/hide
Query:  RHVRPYYFEFIAHVKNRWAGKTIVDLFAEEFKGRPYEYYVDAVKCGRIQVDGEMVPASYIVKSSQKISHFLHRHEPPVMAWGVKILKEEAEVLTVCKPAS
        RHVRPYYFEFIAHVKNRWAGKTIVDLFAEEFKGRPYEYYVDAVKCGRIQVDGE+VP SYIVKSSQKISHFLHRHEPPVMAWGVK+LKEEAEVLTVCKPAS
Subjt:  RHVRPYYFEFIAHVKNRWAGKTIVDLFAEEFKGRPYEYYVDAVKCGRIQVDGEMVPASYIVKSSQKISHFLHRHEPPVMAWGVKILKEEAEVLTVCKPAS

Query:  VP------------------------------------------------------IESGLVKKQYVARVVGVFPEKEQVVDVNINYNAREGRSTAEMVD
        VP                                                      IESGLVKKQY+ARVVGVFPE+EQVVD NINYNAREGRSTAEMVD
Subjt:  VP------------------------------------------------------IESGLVKKQYVARVVGVFPEKEQVVDVNINYNAREGRSTAEMVD

Query:  SSTDTPTKGKAAQTKFTRISSDGVHSIVLCEPITGRTHQIRVHLQYTGYPIANDALYLTKEASDRSVEKTTADRAAAISTCSPAHTTEK
        SSTDTPTKGKAAQTKFTRISS+GVHSIVLCEPITGRTHQIRVHLQYTGYPIANDALYLTKEAS RSV+KTTADRAAAIS+CSPA   E+
Subjt:  SSTDTPTKGKAAQTKFTRISSDGVHSIVLCEPITGRTHQIRVHLQYTGYPIANDALYLTKEASDRSVEKTTADRAAAISTCSPAHTTEK

A0A1S3CLH7 Pseudouridine synthase9.5e-11476.21Show/hide
Query:  RHVRPYYFEFIAHVKNRWAGKTIVDLFAEEFKGRPYEYYVDAVKCGRIQVDGEMVPASYIVKSSQKISHFLHRHEPPVMAWGVKILKEEAEVLTVCKPAS
        RHVRPYYFEFIAHVKNRWAGKTIVDLFAEEFKGRPYEYYVDAVKCGRIQVDGE+VP SYIVKSSQKISHFLHRHEPPVMAWGVK+LKEEAEVLTVCKPAS
Subjt:  RHVRPYYFEFIAHVKNRWAGKTIVDLFAEEFKGRPYEYYVDAVKCGRIQVDGEMVPASYIVKSSQKISHFLHRHEPPVMAWGVKILKEEAEVLTVCKPAS

Query:  VP------------------------------------------------------IESGLVKKQYVARVVGVFPEKEQVVDVNINYNAREGRSTAE-MV
        VP                                                      IESGLVKKQY+ARVVGVFPE+EQVVD NINYNAREGRSTAE MV
Subjt:  VP------------------------------------------------------IESGLVKKQYVARVVGVFPEKEQVVDVNINYNAREGRSTAE-MV

Query:  DSSTDTPTKGKAAQTKFTRISSDGVHSIVLCEPITGRTHQIRVHLQYTGYPIANDALYLTKEASDRSVEKTTADRAAAISTCSPAHTTEK
        DSSTDTPTKGKAAQTKFTRISS+GVHSIVLCEPITGRTHQIRVHLQYTGYPIANDALYLTKEAS RSV+KTTADRAAAIS+CSPA   E+
Subjt:  DSSTDTPTKGKAAQTKFTRISSDGVHSIVLCEPITGRTHQIRVHLQYTGYPIANDALYLTKEASDRSVEKTTADRAAAISTCSPAHTTEK

A0A5A7UPG8 Pseudouridine synthase9.5e-11476.21Show/hide
Query:  RHVRPYYFEFIAHVKNRWAGKTIVDLFAEEFKGRPYEYYVDAVKCGRIQVDGEMVPASYIVKSSQKISHFLHRHEPPVMAWGVKILKEEAEVLTVCKPAS
        RHVRPYYFEFIAHVKNRWAGKTIVDLFAEEFKGRPYEYYVDAVKCGRIQVDGE+VP SYIVKSSQKISHFLHRHEPPVMAWGVK+LKEEAEVLTVCKPAS
Subjt:  RHVRPYYFEFIAHVKNRWAGKTIVDLFAEEFKGRPYEYYVDAVKCGRIQVDGEMVPASYIVKSSQKISHFLHRHEPPVMAWGVKILKEEAEVLTVCKPAS

Query:  VP------------------------------------------------------IESGLVKKQYVARVVGVFPEKEQVVDVNINYNAREGRSTAE-MV
        VP                                                      IESGLVKKQY+ARVVGVFPE+EQVVD NINYNAREGRSTAE MV
Subjt:  VP------------------------------------------------------IESGLVKKQYVARVVGVFPEKEQVVDVNINYNAREGRSTAE-MV

Query:  DSSTDTPTKGKAAQTKFTRISSDGVHSIVLCEPITGRTHQIRVHLQYTGYPIANDALYLTKEASDRSVEKTTADRAAAISTCSPAHTTEK
        DSSTDTPTKGKAAQTKFTRISS+GVHSIVLCEPITGRTHQIRVHLQYTGYPIANDALYLTKEAS RSV+KTTADRAAAIS+CSPA   E+
Subjt:  DSSTDTPTKGKAAQTKFTRISSDGVHSIVLCEPITGRTHQIRVHLQYTGYPIANDALYLTKEASDRSVEKTTADRAAAISTCSPAHTTEK

A0A6J1BZC9 Pseudouridine synthase3.0e-12066.67Show/hide
Query:  RHVRPYYFEFIAHVKNRWAGKTIVDLFAEEFKGRPYEYYVDAVKCGRIQVDGEMVPASYIVKSSQKISHFLHRHEPPVMAWGVKILKEEAEVLTVCKPAS
        RHVRPYYFEFIAHVKNRWAGKTIVDLFAEEFKGRPYEYY+DAVKCGRIQVDGE+VP SYIV+SSQKISHFLHRHEPPVMA  VKILKEEA+VLTVCKPAS
Subjt:  RHVRPYYFEFIAHVKNRWAGKTIVDLFAEEFKGRPYEYYVDAVKCGRIQVDGEMVPASYIVKSSQKISHFLHRHEPPVMAWGVKILKEEAEVLTVCKPAS

Query:  VP------------------------------------------------------IESGLVKKQYVARVVGVFPEKEQVVDVNINYNAREGRSTAEMVD
        VP                                                      IESGLVKKQY+ARVVGVFPEKEQ+VDVNINYNAREGRSTAEMVD
Subjt:  VP------------------------------------------------------IESGLVKKQYVARVVGVFPEKEQVVDVNINYNAREGRSTAEMVD

Query:  SSTDTPTKGKAAQTKFTRISSDGVHSIVLCEPITGRTHQIRVHLQYTGYPIANDALYLTKEASDRSVEKTTADRAAA-----------ISTC-SPAHTTE
        S +D  TKGK AQTKFTRISSDG+HSIVLCEPITGRTHQIRVHLQY+GYPIANDALYLTKEAS RSVE+T ADRAAA           +  C   + T E
Subjt:  SSTDTPTKGKAAQTKFTRISSDGVHSIVLCEPITGRTHQIRVHLQYTGYPIANDALYLTKEASDRSVEKTTADRAAA-----------ISTC-SPAHTTE

Query:  KKRVCGCIVFSILDQDGSTNAHIQNGLHFNSLFFSDPPLFLLSPYSMMNIVTNADYGTDGTAILEG
         KRV GCIVF ILDQDGSTNAHIQNGLHFN+      P   L   SM+     + +   G AILEG
Subjt:  KKRVCGCIVFSILDQDGSTNAHIQNGLHFNSLFFSDPPLFLLSPYSMMNIVTNADYGTDGTAILEG

A0A6J1C2L7 RNA pseudouridine synthase 7 isoform X14.9e-11865.33Show/hide
Query:  RHVRPYYFEFIAHVKNRWAGKTIVDLFAEEFKGRPYEYYV---------DAVKCGRIQVDGEMVPASYIVKSSQKISHFLHRHEPPVMAWGVKILKEEAE
        RHVRPYYFEFIAHVKNRWAGKTIVDLFAEEFKGRPYEYYV         DAVKCGRIQVDGE+VP SYIV+SSQKISHFLHRHEPPVMA  VKILKEEA+
Subjt:  RHVRPYYFEFIAHVKNRWAGKTIVDLFAEEFKGRPYEYYV---------DAVKCGRIQVDGEMVPASYIVKSSQKISHFLHRHEPPVMAWGVKILKEEAE

Query:  VLTVCKPASVP------------------------------------------------------IESGLVKKQYVARVVGVFPEKEQVVDVNINYNARE
        VLTVCKPASVP                                                      IESGLVKKQY+ARVVGVFPEKEQ+VDVNINYNARE
Subjt:  VLTVCKPASVP------------------------------------------------------IESGLVKKQYVARVVGVFPEKEQVVDVNINYNARE

Query:  GRSTAEMVDSSTDTPTKGKAAQTKFTRISSDGVHSIVLCEPITGRTHQIRVHLQYTGYPIANDALYLTKEASDRSVEKTTADRAAA-----------IST
        GRSTAEMVDS +D  TKGK AQTKFTRISSDG+HSIVLCEPITGRTHQIRVHLQY+GYPIANDALYLTKEAS RSVE+T ADRAAA           +  
Subjt:  GRSTAEMVDSSTDTPTKGKAAQTKFTRISSDGVHSIVLCEPITGRTHQIRVHLQYTGYPIANDALYLTKEASDRSVEKTTADRAAA-----------IST

Query:  C-SPAHTTEKKRVCGCIVFSILDQDGSTNAHIQNGLHFNSLFFSDPPLFLLSPYSMMNIVTNADYGTDGTAILEG
        C   + T E KRV GCIVF ILDQDGSTNAHIQNGLHFN+      P   L   SM+     + +   G AILEG
Subjt:  C-SPAHTTEKKRVCGCIVFSILDQDGSTNAHIQNGLHFNSLFFSDPPLFLLSPYSMMNIVTNADYGTDGTAILEG

SwissProt top hitse value%identityAlignment
Q09709 Uncharacterized protein C18B11.02c5.0e-3534.44Show/hide
Query:  RHVRPYYFEFIAHVKNRWAGKTIVDLFAEEFKGRPYEYYVDAVKCGRIQVDGEMVPASYIVKSSQKISHFLHRHEPPVMAWGVKILKEEAEVLTVCKPAS
        R V PYY+E+I   K RW GKT++++F  EF+ R   YY  A++ G+++V+ ++     ++++   +SH  HRHEPPV    V I+ E+   + + KPA 
Subjt:  RHVRPYYFEFIAHVKNRWAGKTIVDLFAEEFKGRPYEYYVDAVKCGRIQVDGEMVPASYIVKSSQKISHFLHRHEPPVMAWGVKILKEEAEVLTVCKPAS

Query:  VPIE---------------------------------SGL---------------------VKKQYVARVVGVFPEKEQVV-DVNINYNAREGRSTAEMV
        VP+                                  SGL                     +KK+YVARV+G FP   +V+ D  +        + A  +
Subjt:  VPIE---------------------------------SGL---------------------VKKQYVARVVGVFPEKEQVV-DVNINYNAREGRSTAEMV

Query:  DSSTDTPTKGKAAQTKFTRISSDGVHSIVLCEPITGRTHQIRVHLQYTGYPIANDALYLTKEASDRSVEK
          +   P  GK A T F RI+ DG  S+VLC+P+TGRTHQ+RVHLQY GYPIAND +Y  K     S+ K
Subjt:  DSSTDTPTKGKAAQTKFTRISSDGVHSIVLCEPITGRTHQIRVHLQYTGYPIANDALYLTKEASDRSVEK

Q0E0Y3 RNA pseudouridine synthase 76.2e-7853.52Show/hide
Query:  RHVRPYYFEFIAHVKNRWAGKTIVDLFAEEFKGRPYEYYVDAVKCGRIQVDGEMVPASYIVKSSQKISHFLHRHEPPVMAWGVKILKEEAEVLTVCKPAS
        R+VRPYYFEFI+HVKNRWAGKTIVDLF +EFKGRP EYYV AVKCGR+QVD +MV A Y+V+SSQKISHFLHRHEPPV+   + IL+ EA+V+TVCKPAS
Subjt:  RHVRPYYFEFIAHVKNRWAGKTIVDLFAEEFKGRPYEYYVDAVKCGRIQVDGEMVPASYIVKSSQKISHFLHRHEPPVMAWGVKILKEEAEVLTVCKPAS

Query:  VP------------------------------------------------------IESGLVKKQYVARVVGVFPEKEQVVDVNINYNAREGRSTAEMVD
        VP                                                      IE+ L++K+YVA+VVGVFP+ EQ V+ N+++NAREGRSTAE+ D
Subjt:  VP------------------------------------------------------IESGLVKKQYVARVVGVFPEKEQVVDVNINYNAREGRSTAEMVD

Query:  SSTDTPTKGKAAQTKFTRISSDGVHSIVLCEPITGRTHQIRVHLQYTGYPIANDALYLTKEASDRSVEKTTADRAAAISTCSPA
             P  GK A TKF RI +DG+HSIVLC+P+TGRTHQIRVHL++ GYPIAND +YL++  S RS + T  +RA  ++   P+
Subjt:  SSTDTPTKGKAAQTKFTRISSDGVHSIVLCEPITGRTHQIRVHLQYTGYPIANDALYLTKEASDRSVEKTTADRAAAISTCSPA

Q12069 tRNA pseudouridine(32) synthase, mitochondrial2.5e-3433.46Show/hide
Query:  RHVRPYYFEFIAHVKNRWAGKTIVDLFAEEFKGRPYEYYVDAVKCGRIQVDGEMVPASYIVKSSQKISHFLHRHEPPVMAWGVKILKEEAEVLTVCKPAS
        R ++PY+F +    K RW  K +VD+F  EF+ R  EYY   ++ G + ++ E    S ++++   I+H +HRHEPPV +  +K++ E+  ++ + KP+ 
Subjt:  RHVRPYYFEFIAHVKNRWAGKTIVDLFAEEFKGRPYEYYVDAVKCGRIQVDGEMVPASYIVKSSQKISHFLHRHEPPVMAWGVKILKEEAEVLTVCKPAS

Query:  VPIE--------------------------------SGL---------------------VKKQYVARVVGVFPEKEQVVDVNINYNAREGRSTAEMVDS
        +P+                                 SGL                     V K+YVA+VVG FPE E +V+  +     E R     V  
Subjt:  VPIE--------------------------------SGL---------------------VKKQYVARVVGVFPEKEQVVDVNINYNAREGRSTAEMVDS

Query:  STDTPTKG-KAAQTKFTRISSDGVHSIVLCEPITGRTHQIRVHLQYTGYPIANDALYLTKEASDRSVEK
          +   KG K A+T F RIS DG  SIV C+P+TGR+HQIRVHLQY G+PIAND +Y   E    ++ K
Subjt:  STDTPTKG-KAAQTKFTRISSDGVHSIVLCEPITGRTHQIRVHLQYTGYPIANDALYLTKEASDRSVEK

Q149F1 RNA pseudouridylate synthase domain-containing protein 27.9e-3332.17Show/hide
Query:  RHVRPYYFEFIAHVKNRWAGKTIVDLFAEEFKGRPYEYYVDAVKCGRIQVDGEMV-PASYIVKSSQKISHFLHRHEPPVMAWGVKILKEEAEVLTVCKPA
        R VRPYYF+F  + K RW G++++ +F+ EF+ +P  YY  AV+ GR+ ++ E V   S ++K +  + + +HRHEPPV A  + +L E  +V+ + KP+
Subjt:  RHVRPYYFEFIAHVKNRWAGKTIVDLFAEEFKGRPYEYYVDAVKCGRIQVDGEMV-PASYIVKSSQKISHFLHRHEPPVMAWGVKILKEEAEVLTVCKPA

Query:  SVPIE---------------------------------SGL---------------------VKKQYVARVVGVFPEKEQVVDVNINYNAREGRSTAEMV
        S+P+                                  SG+                     ++K+YV RV G FP+KE +         +E        
Subjt:  SVPIE---------------------------------SGL---------------------VKKQYVARVVGVFPEKEQVVDVNINYNAREGRSTAEMV

Query:  DSSTDTPTKGKAAQTKFTRISSDGVHSIVLCEPITGRTHQIRVHLQYTGYPIANDALY
                +GK  +T F R+S +G  S+V C P+TGRTHQIRVHLQ+ G+PI ND +Y
Subjt:  DSSTDTPTKGKAAQTKFTRISSDGVHSIVLCEPITGRTHQIRVHLQYTGYPIANDALY

Q9LU60 RNA pseudouridine synthase 71.4e-7758.24Show/hide
Query:  RHVRPYYFEFIAHVKNRWAGKTIVDLFAEEFKGRPYEYYVDAVKCGRIQVDGEMVPASYIVKSSQKISHFLHRHEPPVMAWGVKILKEEAEVLTVCKPAS
        RHVRPYYFEFI+HV  RW GKTIVDLFA+EFKGRP +YYV AVK GRI+VDGE+VP SYIVKSSQKI+HFLHRHEPPVM   V IL +E +V+TVCKPAS
Subjt:  RHVRPYYFEFIAHVKNRWAGKTIVDLFAEEFKGRPYEYYVDAVKCGRIQVDGEMVPASYIVKSSQKISHFLHRHEPPVMAWGVKILKEEAEVLTVCKPAS

Query:  VP------------------------------------------------------IESGLVKKQYVARVVGVFPEKEQVVDVNINYNAREGRSTAEMVD
        VP                                                      IE G+VKK+Y+A+V+GVFPE E +VD NINYN  EGRSTAE  +
Subjt:  VP------------------------------------------------------IESGLVKKQYVARVVGVFPEKEQVVDVNINYNAREGRSTAEMVD

Query:  SS-TDTPTKGKAAQTKFTRISSDGVHSIVLCEPITGRTHQIRVHLQYTGYPIANDALYLTK
        SS  D   KGK A TKFTRI ++G HS+V CEP+TGRTHQIRVHLQYTG+PIAND LYL +
Subjt:  SS-TDTPTKGKAAQTKFTRISSDGVHSIVLCEPITGRTHQIRVHLQYTGYPIANDALYLTK

Arabidopsis top hitse value%identityAlignment
AT5G51140.1 Pseudouridine synthase family protein9.8e-7958.24Show/hide
Query:  RHVRPYYFEFIAHVKNRWAGKTIVDLFAEEFKGRPYEYYVDAVKCGRIQVDGEMVPASYIVKSSQKISHFLHRHEPPVMAWGVKILKEEAEVLTVCKPAS
        RHVRPYYFEFI+HV  RW GKTIVDLFA+EFKGRP +YYV AVK GRI+VDGE+VP SYIVKSSQKI+HFLHRHEPPVM   V IL +E +V+TVCKPAS
Subjt:  RHVRPYYFEFIAHVKNRWAGKTIVDLFAEEFKGRPYEYYVDAVKCGRIQVDGEMVPASYIVKSSQKISHFLHRHEPPVMAWGVKILKEEAEVLTVCKPAS

Query:  VP------------------------------------------------------IESGLVKKQYVARVVGVFPEKEQVVDVNINYNAREGRSTAEMVD
        VP                                                      IE G+VKK+Y+A+V+GVFPE E +VD NINYN  EGRSTAE  +
Subjt:  VP------------------------------------------------------IESGLVKKQYVARVVGVFPEKEQVVDVNINYNAREGRSTAEMVD

Query:  SS-TDTPTKGKAAQTKFTRISSDGVHSIVLCEPITGRTHQIRVHLQYTGYPIANDALYLTK
        SS  D   KGK A TKFTRI ++G HS+V CEP+TGRTHQIRVHLQYTG+PIAND LYL +
Subjt:  SS-TDTPTKGKAAQTKFTRISSDGVHSIVLCEPITGRTHQIRVHLQYTGYPIANDALYLTK

AT5G51140.2 Pseudouridine synthase family protein9.8e-7958.24Show/hide
Query:  RHVRPYYFEFIAHVKNRWAGKTIVDLFAEEFKGRPYEYYVDAVKCGRIQVDGEMVPASYIVKSSQKISHFLHRHEPPVMAWGVKILKEEAEVLTVCKPAS
        RHVRPYYFEFI+HV  RW GKTIVDLFA+EFKGRP +YYV AVK GRI+VDGE+VP SYIVKSSQKI+HFLHRHEPPVM   V IL +E +V+TVCKPAS
Subjt:  RHVRPYYFEFIAHVKNRWAGKTIVDLFAEEFKGRPYEYYVDAVKCGRIQVDGEMVPASYIVKSSQKISHFLHRHEPPVMAWGVKILKEEAEVLTVCKPAS

Query:  VP------------------------------------------------------IESGLVKKQYVARVVGVFPEKEQVVDVNINYNAREGRSTAEMVD
        VP                                                      IE G+VKK+Y+A+V+GVFPE E +VD NINYN  EGRSTAE  +
Subjt:  VP------------------------------------------------------IESGLVKKQYVARVVGVFPEKEQVVDVNINYNAREGRSTAEMVD

Query:  SS-TDTPTKGKAAQTKFTRISSDGVHSIVLCEPITGRTHQIRVHLQYTGYPIANDALYLTK
        SS  D   KGK A TKFTRI ++G HS+V CEP+TGRTHQIRVHLQYTG+PIAND LYL +
Subjt:  SS-TDTPTKGKAAQTKFTRISSDGVHSIVLCEPITGRTHQIRVHLQYTGYPIANDALYLTK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGCGGCACGTTAGACCTTACTACTTCGAGTTCATTGCTCATGTTAAGAATCGATGGGCTGGCAAAACCATTGTCGACTTGTTTGCTGAAGAGTTCAAAGGTCGACC
TTACGAGTACTATGTTGATGCTGTCAAATGTGGTCGCATACAAGTCGATGGGGAGATGGTGCCTGCTTCATATATAGTTAAATCATCTCAAAAGATAAGCCATTTCCTGC
ACAGGCATGAACCTCCAGTAATGGCTTGGGGCGTGAAAATTCTCAAAGAAGAAGCAGAAGTTCTCACGGTTTGCAAGCCCGCGTCTGTTCCGATTGAGTCTGGGCTGGTG
AAGAAGCAGTATGTTGCAAGGGTAGTGGGTGTATTTCCAGAAAAAGAGCAAGTGGTTGATGTTAATATAAATTACAATGCTCGAGAGGGAAGGAGCACAGCGGAGATGGT
TGATTCTTCCACTGATACTCCAACAAAGGGAAAGGCCGCTCAAACAAAGTTTACCCGCATCAGTTCTGATGGAGTCCACAGTATTGTTTTATGTGAACCGATCACCGGCC
GAACTCATCAAATCCGTGTGCATTTGCAATATACAGGGTATCCTATAGCCAACGATGCACTGTACCTTACAAAAGAAGCTTCCGATCGTTCCGTGGAAAAAACAACTGCA
GATAGAGCTGCTGCAATATCAACCTGTTCTCCGGCACATACGACGGAGAAGAAGAGGGTCTGTGGCTGCATTGTGTTCAGTATTCTGGACCAGGATGGATCTACGAATGC
CCATATCCAGAATGGGCTTCACTTTAATAGCCTTTTCTTCAGCGACCCTCCATTGTTCTTGCTTTCGCCATATTCGATGATGAACATTGTTACCAATGCTGATTACGGCA
CGGATGGGACAGCAATTTTGGAAGGAGTTCGAATGCCCCAGTGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGCGGCACGTTAGACCTTACTACTTCGAGTTCATTGCTCATGTTAAGAATCGATGGGCTGGCAAAACCATTGTCGACTTGTTTGCTGAAGAGTTCAAAGGTCGACC
TTACGAGTACTATGTTGATGCTGTCAAATGTGGTCGCATACAAGTCGATGGGGAGATGGTGCCTGCTTCATATATAGTTAAATCATCTCAAAAGATAAGCCATTTCCTGC
ACAGGCATGAACCTCCAGTAATGGCTTGGGGCGTGAAAATTCTCAAAGAAGAAGCAGAAGTTCTCACGGTTTGCAAGCCCGCGTCTGTTCCGATTGAGTCTGGGCTGGTG
AAGAAGCAGTATGTTGCAAGGGTAGTGGGTGTATTTCCAGAAAAAGAGCAAGTGGTTGATGTTAATATAAATTACAATGCTCGAGAGGGAAGGAGCACAGCGGAGATGGT
TGATTCTTCCACTGATACTCCAACAAAGGGAAAGGCCGCTCAAACAAAGTTTACCCGCATCAGTTCTGATGGAGTCCACAGTATTGTTTTATGTGAACCGATCACCGGCC
GAACTCATCAAATCCGTGTGCATTTGCAATATACAGGGTATCCTATAGCCAACGATGCACTGTACCTTACAAAAGAAGCTTCCGATCGTTCCGTGGAAAAAACAACTGCA
GATAGAGCTGCTGCAATATCAACCTGTTCTCCGGCACATACGACGGAGAAGAAGAGGGTCTGTGGCTGCATTGTGTTCAGTATTCTGGACCAGGATGGATCTACGAATGC
CCATATCCAGAATGGGCTTCACTTTAATAGCCTTTTCTTCAGCGACCCTCCATTGTTCTTGCTTTCGCCATATTCGATGATGAACATTGTTACCAATGCTGATTACGGCA
CGGATGGGACAGCAATTTTGGAAGGAGTTCGAATGCCCCAGTGCTGATTATGAACATTGTTGCCAAATGCTGATTACGAAAATGTATTTTGGAAGGAGTTCCAATGACCC
AGTGCTTATGGAAAGCAATTTTAGAAGCAAGTTTCAGAACACTGGATGTAGAAATGAATATGTTTCGTACTCGATTCACTTTTTGAAGATATTATTTACTCAGCAAATTA
CTATAGTGATAATAAGATAAAAGGAAAATTACTATGAACAATATCAAACTATTTACAAAAATAGAAAATTTTCACTGATAGACCATAAATTGTTTTCTATCTTTGTAAAT
ACTTTTCTATATTTGTTAACAATTGAAATTACA
Protein sequenceShow/hide protein sequence
MGRHVRPYYFEFIAHVKNRWAGKTIVDLFAEEFKGRPYEYYVDAVKCGRIQVDGEMVPASYIVKSSQKISHFLHRHEPPVMAWGVKILKEEAEVLTVCKPASVPIESGLV
KKQYVARVVGVFPEKEQVVDVNINYNAREGRSTAEMVDSSTDTPTKGKAAQTKFTRISSDGVHSIVLCEPITGRTHQIRVHLQYTGYPIANDALYLTKEASDRSVEKTTA
DRAAAISTCSPAHTTEKKRVCGCIVFSILDQDGSTNAHIQNGLHFNSLFFSDPPLFLLSPYSMMNIVTNADYGTDGTAILEGVRMPQC