; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi06G016750 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G016750
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionAcyl carrier protein
Genome locationchr06:26971221..26972420
RNA-Seq ExpressionLsi06G016750
SyntenyLsi06G016750
Gene Ontology termsGO:0006633 - fatty acid biosynthetic process (biological process)
GO:0009416 - response to light stimulus (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0000036 - acyl carrier activity (molecular function)
GO:0031177 - phosphopantetheine binding (molecular function)
InterPro domainsIPR003231 - Acyl carrier protein (ACP)
IPR006162 - Phosphopantetheine attachment site
IPR009081 - Phosphopantetheine binding ACP domain
IPR020806 - Polyketide synthase, phosphopantetheine-binding domain
IPR036736 - ACP-like superfamily
IPR044813 - Acyl carrier protein, chloroplastic


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057735.1 acyl carrier protein 4 [Cucumis melo var. makuwa]3.7e-4392.79Show/hide
Query:  LYILRRSSAGRGLL-NNNGFHLLRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEAAD
        L +LRRS  G+GLL NNN FH LRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEAAD
Subjt:  LYILRRSSAGRGLL-NNNGFHLLRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEAAD

Query:  LIEDLVVKQQS
        LIEDLVVKQQS
Subjt:  LIEDLVVKQQS

XP_008464386.1 PREDICTED: acyl carrier protein 4, chloroplastic [Cucumis melo]8.3e-4393.58Show/hide
Query:  ILRRSSAGRGLL-NNNGFHLLRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEAADLI
        +LRRS  G+GLL NNN FH LRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEAADLI
Subjt:  ILRRSSAGRGLL-NNNGFHLLRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEAADLI

Query:  EDLVVKQQS
        EDLVVKQQS
Subjt:  EDLVVKQQS

XP_022987144.1 acyl carrier protein 4, chloroplastic-like [Cucurbita maxima]4.1e-4286.44Show/hide
Query:  ILRRSSAGR-GLLNNNGFHL---------LRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNIT
        +LRRSSAG  GLL +NGFHL         LRVSCAAKPETVDKVCSIVRKQLALPE+SELTPESKF+ALGADSLDTVEIIMTLEEEFSINIEEDNAQNIT
Subjt:  ILRRSSAGR-GLLNNNGFHL---------LRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNIT

Query:  TVQEAADLIEDLVVKQQS
        TVQEAADLIEDLVVKQQS
Subjt:  TVQEAADLIEDLVVKQQS

XP_023516582.1 acyl carrier protein 4, chloroplastic-like [Cucurbita pepo subsp. pepo]4.1e-4286.44Show/hide
Query:  ILRRSSAGR-GLLNNNGFHL---------LRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNIT
        +LRRSSAG  GLL +NGFHL         LRVSCAAKPETVDKVCSIVRKQLALPE+SELTPESKF+ALGADSLDTVEIIMTLEEEFSINIEEDNAQNIT
Subjt:  ILRRSSAGR-GLLNNNGFHL---------LRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNIT

Query:  TVQEAADLIEDLVVKQQS
        TVQEAADLIEDLVVKQQS
Subjt:  TVQEAADLIEDLVVKQQS

XP_038879812.1 acyl carrier protein 4, chloroplastic-like [Benincasa hispida]3.4e-4494.44Show/hide
Query:  ILRRSSAGRGLLNNNGFHLLRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEAADLIE
        +LR SS GRGLLNNN FH LRVSCAAKPETVDKVCSIVRKQLALPE+SELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEAADLIE
Subjt:  ILRRSSAGRGLLNNNGFHLLRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEAADLIE

Query:  DLVVKQQS
        DLVVKQQS
Subjt:  DLVVKQQS

TrEMBL top hitse value%identityAlignment
A0A0A0LNR6 Acyl carrier protein3.4e-4289.81Show/hide
Query:  ILRRSSAGRGLLNNNGFHLLRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEAADLIE
        +LRRS  GRG LNNN     RVSCAAKPET+DKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEAADLIE
Subjt:  ILRRSSAGRGLLNNNGFHLLRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEAADLIE

Query:  DLVVKQQS
        +LVVKQQS
Subjt:  DLVVKQQS

A0A1S3CLC5 Acyl carrier protein4.0e-4393.58Show/hide
Query:  ILRRSSAGRGLL-NNNGFHLLRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEAADLI
        +LRRS  G+GLL NNN FH LRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEAADLI
Subjt:  ILRRSSAGRGLL-NNNGFHLLRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEAADLI

Query:  EDLVVKQQS
        EDLVVKQQS
Subjt:  EDLVVKQQS

A0A5D3BIB6 Acyl carrier protein1.8e-4392.79Show/hide
Query:  LYILRRSSAGRGLL-NNNGFHLLRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEAAD
        L +LRRS  G+GLL NNN FH LRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEAAD
Subjt:  LYILRRSSAGRGLL-NNNGFHLLRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEAAD

Query:  LIEDLVVKQQS
        LIEDLVVKQQS
Subjt:  LIEDLVVKQQS

A0A6J1JI20 Acyl carrier protein2.0e-4286.44Show/hide
Query:  ILRRSSAGR-GLLNNNGFHL---------LRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNIT
        +LRRSSAG  GLL +NGFHL         LRVSCAAKPETVDKVCSIVRKQLALPE+SELTPESKF+ALGADSLDTVEIIMTLEEEFSINIEEDNAQNIT
Subjt:  ILRRSSAGR-GLLNNNGFHL---------LRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNIT

Query:  TVQEAADLIEDLVVKQQS
        TVQEAADLIEDLVVKQQS
Subjt:  TVQEAADLIEDLVVKQQS

E5GBM2 Acyl carrier protein4.0e-4393.58Show/hide
Query:  ILRRSSAGRGLL-NNNGFHLLRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEAADLI
        +LRRS  G+GLL NNN FH LRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEAADLI
Subjt:  ILRRSSAGRGLL-NNNGFHLLRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEAADLI

Query:  EDLVVKQQS
        EDLVVKQQS
Subjt:  EDLVVKQQS

SwissProt top hitse value%identityAlignment
P52411 Acyl carrier protein 1, chloroplastic9.6e-2659.29Show/hide
Query:  LLTIVLYILRRSSAGRGLLNNNGFHLLRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQ
        L ++ L + R+S     L ++     LRVSC AKPETV KVC IV+KQLALP+ SE+   SKF+ALGADSLDTVEI+M LEEEF I++EE++AQ+I TVQ
Subjt:  LLTIVLYILRRSSAGRGLLNNNGFHLLRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQ

Query:  EAADLIEDLVVKQ
        +AADLIE L+ K+
Subjt:  EAADLIEDLVVKQ

P52412 Acyl carrier protein 2, chloroplastic9.6e-2662.24Show/hide
Query:  RGLLNNNGFHLLRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEAADLIEDLVVKQ
        +   +  G   LRV+C AKPETV KVC+IV+KQLALP+ S+++  SKF+ALGADSLDTVEI+M LEEEF I++EE++AQ+I TVQ+AADLIE L+ K+
Subjt:  RGLLNNNGFHLLRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEAADLIEDLVVKQ

P52414 Acyl carrier protein 4, chloroplastic6.2e-2570.93Show/hide
Query:  RVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEAADLIEDLVVKQ
        RVSC AKPETV KVC IV+KQLALP+ SE+   SKF+ALGADSLDTVEI+M LEEEF I++EE++AQ+I TVQ+AADLIE L+ K+
Subjt:  RVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEAADLIEDLVVKQ

P93092 Acyl carrier protein 1, chloroplastic1.1e-2672.94Show/hide
Query:  VSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEAADLIEDLVVKQ
        V CAAKPETV+KVC+IV+KQLALP+ S +T ESKFA LGADSLDTVEI+M LEEEF IN+EE++AQ+I TVQ+AADLIE L+ K+
Subjt:  VSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEAADLIEDLVVKQ

Q9SW21 Acyl carrier protein 4, chloroplastic3.7e-2556.03Show/hide
Query:  TIVLYILRRSSAGRGL-----LNNNGFHLLRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNIT
        T +  +LR++S+ + +      ++     L++SCAAK ETV KV  IV++QLAL     LT ESKF+ALGADSLDTVEI+M LEE+F+I++EE +AQNIT
Subjt:  TIVLYILRRSSAGRGL-----LNNNGFHLLRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNIT

Query:  TVQEAADLIEDLVVKQ
        T+QEAADLIEDLV K+
Subjt:  TVQEAADLIEDLVVKQ

Arabidopsis top hitse value%identityAlignment
AT1G54580.1 acyl carrier protein 22.9e-2566.67Show/hide
Query:  LRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEAADLIEDLVVKQ
        L VSCAAKPETVDKVC++VRKQL+L E  E+T  +KFAALGADSLDTVEI+M LEEEF I + E+ AQ+I TV++AA LIE+L+ ++
Subjt:  LRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEAADLIEDLVVKQ

AT1G54630.1 acyl carrier protein 38.4e-2565.52Show/hide
Query:  LRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEAADLIEDLVVKQ
        L V CAAKPETVDKVC++VRKQL+L E  E+T  +KFAALGADSLDTVEI+M LEEEF I + E+ AQ+I TV++AA LIE+L++++
Subjt:  LRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEAADLIEDLVVKQ

AT3G05020.1 acyl carrier protein 14.3e-2160.71Show/hide
Query:  LRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEAADLIEDLV
        L VSCAAK ET++KV +IV+KQL+L    ++  E+KFA LGADSLDTVEI+M LEEEF+I + E+ AQ I TV++AA+LIE+L+
Subjt:  LRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNITTVQEAADLIEDLV

AT4G25050.1 acyl carrier protein 42.6e-2656.03Show/hide
Query:  TIVLYILRRSSAGRGL-----LNNNGFHLLRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNIT
        T +  +LR++S+ + +      ++     L++SCAAK ETV KV  IV++QLAL     LT ESKF+ALGADSLDTVEI+M LEE+F+I++EE +AQNIT
Subjt:  TIVLYILRRSSAGRGL-----LNNNGFHLLRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEEFSINIEEDNAQNIT

Query:  TVQEAADLIEDLVVKQ
        T+QEAADLIEDLV K+
Subjt:  TVQEAADLIEDLVVKQ

AT4G25050.2 acyl carrier protein 41.2e-2350.78Show/hide
Query:  TIVLYILRRSSAGRGL-----LNNNGFHLLRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDT------------VEIIMTLEEEFS
        T +  +LR++S+ + +      ++     L++SCAAK ETV KV  IV++QLAL     LT ESKF+ALGADSLDT            VEI+M LEE+F+
Subjt:  TIVLYILRRSSAGRGL-----LNNNGFHLLRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDT------------VEIIMTLEEEFS

Query:  INIEEDNAQNITTVQEAADLIEDLVVKQ
        I++EE +AQNITT+QEAADLIEDLV K+
Subjt:  INIEEDNAQNITTVQEAADLIEDLVVKQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TACTTCCCTCAGATTCTGCATACCTCTCAACCAAGCTACCAAGATGAACCGCAACCAGAATCAGGCATTCTCCCTATATATCTATTGACTATTGTATTGTATATTCTCAG
AAGAAGCTCTGCTGGCCGGGGATTGCTCAACAATAATGGTTTCCATCTTCTTCGTGTCTCTTGTGCGGCAAAACCAGAGACAGTTGATAAAGTGTGTTCAATTGTGAGGA
AACAATTGGCTTTGCCTGAAACTTCAGAGCTCACCCCTGAATCCAAGTTCGCAGCTCTTGGTGCCGACTCCCTCGACACAGTGGAGATTATTATGACTTTAGAGGAAGAA
TTTAGCATCAATATCGAAGAGGATAATGCTCAGAACATAACCACAGTGCAAGAAGCTGCCGATTTGATTGAGGACCTTGTTGTTAAACAGCAATCTTAA
mRNA sequenceShow/hide mRNA sequence
TACTTCCCTCAGATTCTGCATACCTCTCAACCAAGCTACCAAGATGAACCGCAACCAGAATCAGGCATTCTCCCTATATATCTATTGACTATTGTATTGTATATTCTCAG
AAGAAGCTCTGCTGGCCGGGGATTGCTCAACAATAATGGTTTCCATCTTCTTCGTGTCTCTTGTGCGGCAAAACCAGAGACAGTTGATAAAGTGTGTTCAATTGTGAGGA
AACAATTGGCTTTGCCTGAAACTTCAGAGCTCACCCCTGAATCCAAGTTCGCAGCTCTTGGTGCCGACTCCCTCGACACAGTGGAGATTATTATGACTTTAGAGGAAGAA
TTTAGCATCAATATCGAAGAGGATAATGCTCAGAACATAACCACAGTGCAAGAAGCTGCCGATTTGATTGAGGACCTTGTTGTTAAACAGCAATCTTAAAAGACTATATA
GGCTTTTAGTATGTTGAAGTAGTATTATTCCAAGAGTTTTGTTGGGTTGGGTTGAGTAGGTAGTATGTTCTTTTTTCCTCAAATGATTTTTTTTAAGCAAATTAATGTGT
GCTTCTACTGCAGCAACTTGTTAACTACAAAATTTATAATGCAATATGAAGTATGGTGTTGTGTTGTTTTTTGCTCTTTAAACGAGGAGGGGATCGATCAGTCTATTTCA
TGGATTGCAATGGTGGAGAGAAGACAACCTTTTGAAACCATCAAATTTCTTTCAAAAATAAAGTTGATGACCTTTTTCCCTTGGAAAGGAAAGAAAAAAGCCGATGGAAA
GAGATGGTTTTTCAACACTACTTTTATACTAAGTATAATTTATGATTAAGTGGGACCCCCTACTGATAAAAATGTAGCCCATTTTAATGGAGGGTTTGCTTTTGAAGACC
AAAGTAGTTGGCTCAGGTAACAAAGCACTATCACTTCAACACAAAGTGATTGTAGATATGAAAACCCAATTTCT
Protein sequenceShow/hide protein sequence
YFPQILHTSQPSYQDEPQPESGILPIYLLTIVLYILRRSSAGRGLLNNNGFHLLRVSCAAKPETVDKVCSIVRKQLALPETSELTPESKFAALGADSLDTVEIIMTLEEE
FSINIEEDNAQNITTVQEAADLIEDLVVKQQS