; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi06G016770 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G016770
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionRubredoxin-like domain-containing protein
Genome locationchr06:26976776..26978626
RNA-Seq ExpressionLsi06G016770
SyntenyLsi06G016770
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0005506 - iron ion binding (molecular function)
InterPro domainsIPR024934 - Rubredoxin-like domain
IPR024935 - Rubredoxin domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589344.1 hypothetical protein SDJN03_14767, partial [Cucurbita argyrosperma subsp. sororia]1.2e-7085.21Show/hide
Query:  SASSLSLRFHLPSNPHSKVNQEDGGADSNSMFLGSTSKRLSLKSSFISPLRKIPSLRTPNSVAAAAPKFSMRVASKQAYICRDCGYIYNDRTPFDKLPDK
        SASSLSL  HLP NPHSK+NQEDGGAD +SM  GS S R SLKSSFISPLR+IPS R      AAAPKFSMRVASKQAYICRDCGYIYNDRTPF+KLPD 
Subjt:  SASSLSLRFHLPSNPHSKVNQEDGGADSNSMFLGSTSKRLSLKSSFISPLRKIPSLRTPNSVAAAAPKFSMRVASKQAYICRDCGYIYNDRTPFDKLPDK

Query:  YFCPVCGAPKRRFRAYEQSVNKNDNEFDVRKARKAQIQKDEAIGKVLPIAAAVAIVALVGLYLYLNNVF
        YFCPVCGAPKRRFR YEQSV KNDNEFDVRKARKAQIQKDEAIGKVLPIAAAV IVALVGLYLYLN+VF
Subjt:  YFCPVCGAPKRRFRAYEQSVNKNDNEFDVRKARKAQIQKDEAIGKVLPIAAAVAIVALVGLYLYLNNVF
XP_004138023.1 uncharacterized protein LOC101207574 isoform X1 [Cucumis sativus]6.5e-7486.78Show/hide
Query:  MASVSASSLSLRFHLPSNPHSKVNQEDGGADSNSMFLGSTSKRLSLKSSFISPLRKIPSLRTPNS-VAAAAPKFSMRVASKQAYICRDCGYIYNDRTPFD
        MAS+SASSLS  FHLP  PH K+NQEDGG D NSMFL S S RLSLKSSFISPLRKIPSLR  NS VAAA+PKFSMRVASKQAYICRDCGYIYNDRTPFD
Subjt:  MASVSASSLSLRFHLPSNPHSKVNQEDGGADSNSMFLGSTSKRLSLKSSFISPLRKIPSLRTPNS-VAAAAPKFSMRVASKQAYICRDCGYIYNDRTPFD

Query:  KLPDKYFCPVCGAPKRRFRAYEQSVNKNDNEFDVRKARKAQIQKDEAIGKVLPIAAAVAIVALVGLYLYLNNVF
        KLPDKYFCPVCGAPKRRFR YEQ+V+KNDNEFDVRKARKAQIQKDEAIGKVLPIAAA+ IVALVGLYLYLN+ F
Subjt:  KLPDKYFCPVCGAPKRRFRAYEQSVNKNDNEFDVRKARKAQIQKDEAIGKVLPIAAAVAIVALVGLYLYLNNVF
XP_008464376.1 PREDICTED: uncharacterized protein LOC103502280 isoform X1 [Cucumis melo]1.0e-7487.93Show/hide
Query:  MASVSASSLSLRFHLPSNPHSKVNQEDGGADSNSMFLGSTSKRLSLKSSFISPLRKIPSLRTPNS-VAAAAPKFSMRVASKQAYICRDCGYIYNDRTPFD
        MASVSASSLS  FHLP  PH K+NQEDGG D NSMFL S S RLSLKSSFISPLRKIPSLR  NS VAAA+PKFSMRVASKQAYICRDCGYIYNDRTPFD
Subjt:  MASVSASSLSLRFHLPSNPHSKVNQEDGGADSNSMFLGSTSKRLSLKSSFISPLRKIPSLRTPNS-VAAAAPKFSMRVASKQAYICRDCGYIYNDRTPFD

Query:  KLPDKYFCPVCGAPKRRFRAYEQSVNKNDNEFDVRKARKAQIQKDEAIGKVLPIAAAVAIVALVGLYLYLNNVF
        KLPDKYFCPVCGAPKRRFR YEQ+VNKNDNEFD+RKARKAQIQKDEAIGKVLPIAAA+ IVALVGLYLYLN+VF
Subjt:  KLPDKYFCPVCGAPKRRFRAYEQSVNKNDNEFDVRKARKAQIQKDEAIGKVLPIAAAVAIVALVGLYLYLNNVF
XP_022921625.1 uncharacterized protein LOC111429830 isoform X1 [Cucurbita moschata]8.8e-7184.48Show/hide
Query:  MASVSASSLSLRFHLPSNPHSKVNQEDGGADSNSMFLGSTSKRLSLKSSFISPLRKIPSLRTPNSVAAAAPKFSMRVASKQAYICRDCGYIYNDRTPFDK
        MAS SASSLS  FHLP NPHSK+NQEDGGAD +SM  GS S R SLKSSFISPLR+IPS R      AAAPKFSMRVASKQAYICRDCGYIYNDRTPF+K
Subjt:  MASVSASSLSLRFHLPSNPHSKVNQEDGGADSNSMFLGSTSKRLSLKSSFISPLRKIPSLRTPNSVAAAAPKFSMRVASKQAYICRDCGYIYNDRTPFDK

Query:  LPDKYFCPVCGAPKRRFRAYEQSVNKNDNEFDVRKARKAQIQKDEAIGKVLPI-AAAVAIVALVGLYLYLNNVF
        LPD YFCPVCGAPKRRFR YEQSV KNDNEFDVRKARKAQIQKDEAIGKVLPI AAAV IVALVGLYLYLN+VF
Subjt:  LPDKYFCPVCGAPKRRFRAYEQSVNKNDNEFDVRKARKAQIQKDEAIGKVLPI-AAAVAIVALVGLYLYLNNVF
XP_023516579.1 uncharacterized protein LOC111780418 isoform X1 [Cucurbita pepo subsp. pepo]1.0e-7184.39Show/hide
Query:  MASVSASSLSLRFHLPSNPHSKVNQEDGGADSNSMFLGSTSKRLSLKSSFISPLRKIPSLRTPNSVAAAAPKFSMRVASKQAYICRDCGYIYNDRTPFDK
        MAS SASSLS  FHLP NPHSK+NQEDGGAD  SM  GS S R SLKSSFISPLR+IPS R      AAAPKFSMRVASKQAYICRDCGYIYNDRTPF+K
Subjt:  MASVSASSLSLRFHLPSNPHSKVNQEDGGADSNSMFLGSTSKRLSLKSSFISPLRKIPSLRTPNSVAAAAPKFSMRVASKQAYICRDCGYIYNDRTPFDK

Query:  LPDKYFCPVCGAPKRRFRAYEQSVNKNDNEFDVRKARKAQIQKDEAIGKVLPIAAAVAIVALVGLYLYLNNVF
        LPD YFCPVCGAPKRRFR YEQSV KNDNEFDVRKARKAQIQKDEAIGKVLPIAAAV I+ALVGLYLYLN+VF
Subjt:  LPDKYFCPVCGAPKRRFRAYEQSVNKNDNEFDVRKARKAQIQKDEAIGKVLPIAAAVAIVALVGLYLYLNNVF
TrEMBL top hitse value%identityAlignment
A0A0A0LNF5 Rubredoxin-like domain-containing protein3.2e-7486.78Show/hide
Query:  MASVSASSLSLRFHLPSNPHSKVNQEDGGADSNSMFLGSTSKRLSLKSSFISPLRKIPSLRTPNS-VAAAAPKFSMRVASKQAYICRDCGYIYNDRTPFD
        MAS+SASSLS  FHLP  PH K+NQEDGG D NSMFL S S RLSLKSSFISPLRKIPSLR  NS VAAA+PKFSMRVASKQAYICRDCGYIYNDRTPFD
Subjt:  MASVSASSLSLRFHLPSNPHSKVNQEDGGADSNSMFLGSTSKRLSLKSSFISPLRKIPSLRTPNS-VAAAAPKFSMRVASKQAYICRDCGYIYNDRTPFD

Query:  KLPDKYFCPVCGAPKRRFRAYEQSVNKNDNEFDVRKARKAQIQKDEAIGKVLPIAAAVAIVALVGLYLYLNNVF
        KLPDKYFCPVCGAPKRRFR YEQ+V+KNDNEFDVRKARKAQIQKDEAIGKVLPIAAA+ IVALVGLYLYLN+ F
Subjt:  KLPDKYFCPVCGAPKRRFRAYEQSVNKNDNEFDVRKARKAQIQKDEAIGKVLPIAAAVAIVALVGLYLYLNNVF
A0A1S3CLS9 uncharacterized protein LOC103502280 isoform X14.9e-7587.93Show/hide
Query:  MASVSASSLSLRFHLPSNPHSKVNQEDGGADSNSMFLGSTSKRLSLKSSFISPLRKIPSLRTPNS-VAAAAPKFSMRVASKQAYICRDCGYIYNDRTPFD
        MASVSASSLS  FHLP  PH K+NQEDGG D NSMFL S S RLSLKSSFISPLRKIPSLR  NS VAAA+PKFSMRVASKQAYICRDCGYIYNDRTPFD
Subjt:  MASVSASSLSLRFHLPSNPHSKVNQEDGGADSNSMFLGSTSKRLSLKSSFISPLRKIPSLRTPNS-VAAAAPKFSMRVASKQAYICRDCGYIYNDRTPFD

Query:  KLPDKYFCPVCGAPKRRFRAYEQSVNKNDNEFDVRKARKAQIQKDEAIGKVLPIAAAVAIVALVGLYLYLNNVF
        KLPDKYFCPVCGAPKRRFR YEQ+VNKNDNEFD+RKARKAQIQKDEAIGKVLPIAAA+ IVALVGLYLYLN+VF
Subjt:  KLPDKYFCPVCGAPKRRFRAYEQSVNKNDNEFDVRKARKAQIQKDEAIGKVLPIAAAVAIVALVGLYLYLNNVF
A0A5A7UPF0 Rubredoxin family protein4.9e-7587.93Show/hide
Query:  MASVSASSLSLRFHLPSNPHSKVNQEDGGADSNSMFLGSTSKRLSLKSSFISPLRKIPSLRTPNS-VAAAAPKFSMRVASKQAYICRDCGYIYNDRTPFD
        MASVSASSLS  FHLP  PH K+NQEDGG D NSMFL S S RLSLKSSFISPLRKIPSLR  NS VAAA+PKFSMRVASKQAYICRDCGYIYNDRTPFD
Subjt:  MASVSASSLSLRFHLPSNPHSKVNQEDGGADSNSMFLGSTSKRLSLKSSFISPLRKIPSLRTPNS-VAAAAPKFSMRVASKQAYICRDCGYIYNDRTPFD

Query:  KLPDKYFCPVCGAPKRRFRAYEQSVNKNDNEFDVRKARKAQIQKDEAIGKVLPIAAAVAIVALVGLYLYLNNVF
        KLPDKYFCPVCGAPKRRFR YEQ+VNKNDNEFD+RKARKAQIQKDEAIGKVLPIAAA+ IVALVGLYLYLN+VF
Subjt:  KLPDKYFCPVCGAPKRRFRAYEQSVNKNDNEFDVRKARKAQIQKDEAIGKVLPIAAAVAIVALVGLYLYLNNVF
A0A6J1E6B5 uncharacterized protein LOC111429830 isoform X14.3e-7184.48Show/hide
Query:  MASVSASSLSLRFHLPSNPHSKVNQEDGGADSNSMFLGSTSKRLSLKSSFISPLRKIPSLRTPNSVAAAAPKFSMRVASKQAYICRDCGYIYNDRTPFDK
        MAS SASSLS  FHLP NPHSK+NQEDGGAD +SM  GS S R SLKSSFISPLR+IPS R      AAAPKFSMRVASKQAYICRDCGYIYNDRTPF+K
Subjt:  MASVSASSLSLRFHLPSNPHSKVNQEDGGADSNSMFLGSTSKRLSLKSSFISPLRKIPSLRTPNSVAAAAPKFSMRVASKQAYICRDCGYIYNDRTPFDK

Query:  LPDKYFCPVCGAPKRRFRAYEQSVNKNDNEFDVRKARKAQIQKDEAIGKVLPI-AAAVAIVALVGLYLYLNNVF
        LPD YFCPVCGAPKRRFR YEQSV KNDNEFDVRKARKAQIQKDEAIGKVLPI AAAV IVALVGLYLYLN+VF
Subjt:  LPDKYFCPVCGAPKRRFRAYEQSVNKNDNEFDVRKARKAQIQKDEAIGKVLPI-AAAVAIVALVGLYLYLNNVF
E5GBM0 Electron transporter4.9e-7587.93Show/hide
Query:  MASVSASSLSLRFHLPSNPHSKVNQEDGGADSNSMFLGSTSKRLSLKSSFISPLRKIPSLRTPNS-VAAAAPKFSMRVASKQAYICRDCGYIYNDRTPFD
        MASVSASSLS  FHLP  PH K+NQEDGG D NSMFL S S RLSLKSSFISPLRKIPSLR  NS VAAA+PKFSMRVASKQAYICRDCGYIYNDRTPFD
Subjt:  MASVSASSLSLRFHLPSNPHSKVNQEDGGADSNSMFLGSTSKRLSLKSSFISPLRKIPSLRTPNS-VAAAAPKFSMRVASKQAYICRDCGYIYNDRTPFD

Query:  KLPDKYFCPVCGAPKRRFRAYEQSVNKNDNEFDVRKARKAQIQKDEAIGKVLPIAAAVAIVALVGLYLYLNNVF
        KLPDKYFCPVCGAPKRRFR YEQ+VNKNDNEFD+RKARKAQIQKDEAIGKVLPIAAA+ IVALVGLYLYLN+VF
Subjt:  KLPDKYFCPVCGAPKRRFRAYEQSVNKNDNEFDVRKARKAQIQKDEAIGKVLPIAAAVAIVALVGLYLYLNNVF
SwissProt top hitse value%identityAlignment
O26258 Probable rubredoxin2.5e-0439.62Show/hide
Query:  VASKQAYICRDCGYIYNDR-----------TPFDKLPDKYFCPVCGAPKRRFR
        V++ + Y CR CGYIY+             TPF+ LP+ + CP CGA K+ F+
Subjt:  VASKQAYICRDCGYIYNDR-----------TPFDKLPDKYFCPVCGAPKRRFR
P04170 Rubredoxin-11.0e-0551.22Show/hide
Query:  QAYICRDCGYIY----NDRTPFDKLPDKYFCPVCGAPKRRF
        Q Y+C  CGY Y    +D  PFD+LPD + CPVCG  K +F
Subjt:  QAYICRDCGYIY----NDRTPFDKLPDKYFCPVCGAPKRRF
P24297 Rubredoxin3.9e-0540Show/hide
Query:  YICRDCGYIYND-----------RTPFDKLPDKYFCPVCGAPKRRFRAYE
        ++C+ CGYIY++            T F++LPD + CP+CGAPK  F   E
Subjt:  YICRDCGYIYND-----------RTPFDKLPDKYFCPVCGAPKRRFRAYE
P58992 Rubredoxin-11.1e-0440Show/hide
Query:  AYICRDCGYIYNDR-----------TPFDKLPDKYFCPVCGAPKRRFRAY
        +++C +CGYIY+              PFDKLPD + CPVC  PK +F  +
Subjt:  AYICRDCGYIYNDR-----------TPFDKLPDKYFCPVCGAPKRRFRAY
Q9V099 Rubredoxin5.7e-0441.67Show/hide
Query:  CRDCGYIYND-----------RTPFDKLPDKYFCPVCGAPKRRFRAYE
        C+ CGYIY++            T F+ LPD + CP+CGAPK  F   E
Subjt:  CRDCGYIYND-----------RTPFDKLPDKYFCPVCGAPKRRFRAYE
Arabidopsis top hitse value%identityAlignment
AT5G17170.1 rubredoxin family protein6.0e-0941.94Show/hide
Query:  AAPKFSMRVASKQ----AYICRDCGYIYNDRTPFDKLPDKYFCPVCGAPKRRFRAYEQSVNK
        A P+F  ++   Q     +IC DCG+IY     FD+ PD Y CP C APK+RF  Y+ +  K
Subjt:  AAPKFSMRVASKQ----AYICRDCGYIYNDRTPFDKLPDKYFCPVCGAPKRRFRAYEQSVNK
AT5G51010.1 Rubredoxin-like superfamily protein3.5e-4160.84Show/hide
Query:  ADSNSMFLGSTSKRLSLKSSFISPLRKIPSLRTPNSVA-AAAPKFSMRVASKQAYICRDCGYIYNDRTPFDKLPDKYFCPVCGAPKRRFRAYEQSVNKND
        A  +S+ L  T+  L  +SSF+ P   +  L    S++ ++AP+FSMRV+SKQAYICRDCGYIYNDRTPFDKLPD YFCPVC APKRRFRAY   V+KN 
Subjt:  ADSNSMFLGSTSKRLSLKSSFISPLRKIPSLRTPNSVA-AAAPKFSMRVASKQAYICRDCGYIYNDRTPFDKLPDKYFCPVCGAPKRRFRAYEQSVNKND

Query:  NEFDVRKARKAQIQKDEAIGKVLPIAAAVAIVALVGLYLYLNN
        N+ DVRKARKA++Q+DEA+GK LPI  AV ++AL  LY Y+N+
Subjt:  NEFDVRKARKAQIQKDEAIGKVLPIAAAVAIVALVGLYLYLNN

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCGTTTCAGCTTCTTCTCTCAGTCTCAGATTCCACCTACCATCGAACCCACATTCCAAGGTTAACCAGGAAGACGGCGGCGCTGATAGCAACTCCATGTTTTT
GGGTTCTACTTCCAAACGTTTATCTTTGAAATCCTCCTTCATCTCTCCTTTACGTAAGATTCCTTCTTTAAGGACGCCAAACTCTGTTGCTGCTGCTGCCCCCAAGTTCT
CCATGCGCGTCGCTTCCAAACAAGCCTATATCTGCCGTGATTGCGGGTACATTTACAACGATAGAACTCCTTTTGACAAATTGCCTGATAAGTATTTCTGTCCTGTATGT
GGTGCTCCTAAGCGACGATTTAGAGCTTATGAGCAATCTGTGAATAAAAATGATAACGAATTTGATGTGAGGAAGGCGAGAAAGGCGCAGATCCAGAAAGATGAAGCTAT
TGGGAAGGTGCTGCCTATTGCTGCTGCAGTGGCAATCGTGGCACTTGTAGGTTTATACTTGTACCTGAATAACGTCTTCTAG
mRNA sequenceShow/hide mRNA sequence
GGAAGATGAATTTGTTGGACGGGAATGGATGGTAGTGTAAGTTTGAAGAGGGTGAGGAGTGTAGAGAGATAGGATTGGTATTGGATCAAAATGATTGGGAAGATTGATTG
ATTGTCCACCACTCATAGTTCCCATTCACTATTCACCCATTCTCTTCTCTCTGTTTTCTGCTGATTTCCCATCCTTCTCTCTCATTTCAACTCCCTCTGCTTCAGCTTTA
CCTTCCTTCAATGGCTTCCGTTTCAGCTTCTTCTCTCAGTCTCAGATTCCACCTACCATCGAACCCACATTCCAAGGTTAACCAGGAAGACGGCGGCGCTGATAGCAACT
CCATGTTTTTGGGTTCTACTTCCAAACGTTTATCTTTGAAATCCTCCTTCATCTCTCCTTTACGTAAGATTCCTTCTTTAAGGACGCCAAACTCTGTTGCTGCTGCTGCC
CCCAAGTTCTCCATGCGCGTCGCTTCCAAACAAGCCTATATCTGCCGTGATTGCGGGTACATTTACAACGATAGAACTCCTTTTGACAAATTGCCTGATAAGTATTTCTG
TCCTGTATGTGGTGCTCCTAAGCGACGATTTAGAGCTTATGAGCAATCTGTGAATAAAAATGATAACGAATTTGATGTGAGGAAGGCGAGAAAGGCGCAGATCCAGAAAG
ATGAAGCTATTGGGAAGGTGCTGCCTATTGCTGCTGCAGTGGCAATCGTGGCACTTGTAGGTTTATACTTGTACCTGAATAACGTCTTCTAGATCGAGTGGCTTGCTCAC
TGACGGGGGCTTAACATCATTTGTTTGATCATATTCTTCCCGAGGCTGTTTTATTTTGATTTAGATATTATATGTATTTTTTCCATCCACTATCCAAATACACTGGCAAA
TTGTTTAAGCTTTACATTATTATTATATATATACACACTGAATTGTTTATTGATTATGTTTATTTGCACTCAGTGGAATAGCCGTGTGCCTTACCTAATTTATTGGACCT
GTAGATGTGGCTTGGGGTTTGATTGACTTTGGGGTGATTATATTTTGGAAGATTTTGTTTAACCAGTTCTTTCATGGACTGGACAATTGATGTGCTTCTAGATTCACTTA
TTCAGGCAGAATTGTTAGACACATTTCTAAGCGACCGCTCTCAACAATGTCCTAAATTGCAGGACAATTTAAACTCACTCTTTCCTTTTTGGTTATGTAAAACCGTTAAA
GGTGCAGAACCAGG
Protein sequenceShow/hide protein sequence
MASVSASSLSLRFHLPSNPHSKVNQEDGGADSNSMFLGSTSKRLSLKSSFISPLRKIPSLRTPNSVAAAAPKFSMRVASKQAYICRDCGYIYNDRTPFDKLPDKYFCPVC
GAPKRRFRAYEQSVNKNDNEFDVRKARKAQIQKDEAIGKVLPIAAAVAIVALVGLYLYLNNVF