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Lsi07G000220 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G000220
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionProtein of unknown function (DUF 3339)
Genome locationchr07:272187..272700
RNA-Seq ExpressionLsi07G000220
SyntenyLsi07G000220
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR021775 - Protein of unknown function DUF3339


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004152115.1 uncharacterized protein LOC101215007 [Cucumis sativus]2.4e-0859.65Show/hide
Query:  MADWGPVFVAVVLFLLLSPGLLFQVPGHHRFLQFGTYTLFPPLILLSNSTFCFSVSV
        MADWGPVFVAVVLFLLLSPGLLFQ+PGH+ F+QFG +      I + +  F   +S+
Subjt:  MADWGPVFVAVVLFLLLSPGLLFQVPGHHRFLQFGTYTLFPPLILLSNSTFCFSVSV

XP_008454011.1 PREDICTED: uncharacterized protein LOC103494560 [Cucumis melo]2.9e-0961.4Show/hide
Query:  MADWGPVFVAVVLFLLLSPGLLFQVPGHHRFLQFGTYTLFPPLILLSNSTFCFSVSV
        MADWGPVFVAVVLFLLLSPGLLFQ+PGHH F+QFG +      I + +  F   +S+
Subjt:  MADWGPVFVAVVLFLLLSPGLLFQVPGHHRFLQFGTYTLFPPLILLSNSTFCFSVSV

XP_022145182.1 uncharacterized protein LOC111014687 [Momordica charantia]1.3e-0986.49Show/hide
Query:  MADWGPVFVAVVLFLLLSPGLLFQVPGHHRFLQFGTY
        MADWGPVFVAVVLFLLLSPGLLFQVPGHH+F++FG +
Subjt:  MADWGPVFVAVVLFLLLSPGLLFQVPGHHRFLQFGTY

XP_022932694.1 uncharacterized protein LOC111439163 [Cucurbita moschata]5.8e-1089.19Show/hide
Query:  MADWGPVFVAVVLFLLLSPGLLFQVPGHHRFLQFGTY
        MADWGPVFVAVVLFLLLSPGLLFQVPGHH F+QFG +
Subjt:  MADWGPVFVAVVLFLLLSPGLLFQVPGHHRFLQFGTY

XP_038900916.1 uncharacterized protein LOC120087962 [Benincasa hispida]5.8e-1064.91Show/hide
Query:  MADWGPVFVAVVLFLLLSPGLLFQVPGHHRFLQFGTYTLFPPLILLSNSTFCFSVSV
        MADWGPVFVAVVLFLLLSPGLLFQVPGHHRF+QFG +      I + +  F   +S+
Subjt:  MADWGPVFVAVVLFLLLSPGLLFQVPGHHRFLQFGTYTLFPPLILLSNSTFCFSVSV

TrEMBL top hitse value%identityAlignment
A0A1S3BX44 uncharacterized protein LOC1034945601.4e-0961.4Show/hide
Query:  MADWGPVFVAVVLFLLLSPGLLFQVPGHHRFLQFGTYTLFPPLILLSNSTFCFSVSV
        MADWGPVFVAVVLFLLLSPGLLFQ+PGHH F+QFG +      I + +  F   +S+
Subjt:  MADWGPVFVAVVLFLLLSPGLLFQVPGHHRFLQFGTYTLFPPLILLSNSTFCFSVSV

A0A6J1CVS1 uncharacterized protein LOC1110146876.3e-1086.49Show/hide
Query:  MADWGPVFVAVVLFLLLSPGLLFQVPGHHRFLQFGTY
        MADWGPVFVAVVLFLLLSPGLLFQVPGHH+F++FG +
Subjt:  MADWGPVFVAVVLFLLLSPGLLFQVPGHHRFLQFGTY

A0A6J1EXQ9 uncharacterized protein LOC1114391632.8e-1089.19Show/hide
Query:  MADWGPVFVAVVLFLLLSPGLLFQVPGHHRFLQFGTY
        MADWGPVFVAVVLFLLLSPGLLFQVPGHH F+QFG +
Subjt:  MADWGPVFVAVVLFLLLSPGLLFQVPGHHRFLQFGTY

A0A6J1I7P7 uncharacterized protein LOC1114707672.8e-1089.19Show/hide
Query:  MADWGPVFVAVVLFLLLSPGLLFQVPGHHRFLQFGTY
        MADWGPVFVAVVLFLLLSPGLLFQVPGHH F+QFG +
Subjt:  MADWGPVFVAVVLFLLLSPGLLFQVPGHHRFLQFGTY

B9N0Y0 Uncharacterized protein1.5e-0875.68Show/hide
Query:  MADWGPVFVAVVLFLLLSPGLLFQVPGHHRFLQFGTY
        M+DWGPVFVAVVLF+LL+PGLL Q+PGHHRF++FG +
Subjt:  MADWGPVFVAVVLFLLLSPGLLFQVPGHHRFLQFGTY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G27030.1 unknown protein2.4e-0970.27Show/hide
Query:  MADWGPVFVAVVLFLLLSPGLLFQVPGHHRFLQFGTY
        M DWGPVFVAV LF+LL+PGLL QVPG  R ++FGT+
Subjt:  MADWGPVFVAVVLFLLLSPGLLFQVPGHHRFLQFGTY

AT3G48660.1 Protein of unknown function (DUF 3339)2.6e-0845.16Show/hide
Query:  MADWGPVFVAVVLFLLLSPGLLFQVPGHHRFLQFGTYTLFPPLILLSNSTFCFSVSVSSVSI
        MADWGPV VAV+LF+LL+PGLLFQ+P   R ++FG        IL+    F   +++ +++I
Subjt:  MADWGPVFVAVVLFLLLSPGLLFQVPGHHRFLQFGTYTLFPPLILLSNSTFCFSVSVSSVSI

AT5G08391.1 Protein of unknown function (DUF 3339)1.2e-0856.76Show/hide
Query:  MADWGPVFVAVVLFLLLSPGLLFQVPGHHRFLQFGTY
        M+DWGPV V V+LF++L+PGLLFQ+PG  ++++FG +
Subjt:  MADWGPVFVAVVLFLLLSPGLLFQVPGHHRFLQFGTY

AT5G40970.1 Protein of unknown function (DUF 3339)1.4e-0974.29Show/hide
Query:  MADWGPVFVAVVLFLLLSPGLLFQVPGHHRFLQFG
        MADW PV V VVLF++LSPGLLF +PGHH  LQFG
Subjt:  MADWGPVFVAVVLFLLLSPGLLFQVPGHHRFLQFG

AT5G40980.1 Protein of unknown function (DUF 3339)4.4e-0870.59Show/hide
Query:  ADWGPVFVAVVLFLLLSPGLLFQVPGHHRFLQFG
        ADWGPV VAV LF+LLSPGLLFQ+P   R ++FG
Subjt:  ADWGPVFVAVVLFLLLSPGLLFQVPGHHRFLQFG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGATTGGGGCCCAGTTTTCGTGGCTGTGGTTCTGTTCCTTCTTCTATCCCCAGGTCTTCTCTTTCAGGTCCCTGGCCACCACCGATTCCTTCAGTTCGGTACATA
CACTCTGTTTCCTCCTTTGATTTTGCTTTCCAATTCTACATTCTGCTTCTCTGTTTCCGTCTCATCTGTCTCTATAATCTCGGGATCGATCTTCGTTTCTATGGCTTCTC
TCTCTCTCTCTCTCTCGGAGAGAAGTATAGTTGTCGGCGGCGGAGTAGACTGGCCGCCGGCTCCGGCCAGCCTTTTACATGGTGCCTTTTGTTTTAGGGATATCGGTGAA
GCCATATTAATTATGTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGATTGGGGCCCAGTTTTCGTGGCTGTGGTTCTGTTCCTTCTTCTATCCCCAGGTCTTCTCTTTCAGGTCCCTGGCCACCACCGATTCCTTCAGTTCGGTACATA
CACTCTGTTTCCTCCTTTGATTTTGCTTTCCAATTCTACATTCTGCTTCTCTGTTTCCGTCTCATCTGTCTCTATAATCTCGGGATCGATCTTCGTTTCTATGGCTTCTC
TCTCTCTCTCTCTCTCGGAGAGAAGTATAGTTGTCGGCGGCGGAGTAGACTGGCCGCCGGCTCCGGCCAGCCTTTTACATGGTGCCTTTTGTTTTAGGGATATCGGTGAA
GCCATATTAATTATGTTGTAA
Protein sequenceShow/hide protein sequence
MADWGPVFVAVVLFLLLSPGLLFQVPGHHRFLQFGTYTLFPPLILLSNSTFCFSVSVSSVSIISGSIFVSMASLSLSLSERSIVVGGGVDWPPAPASLLHGAFCFRDIGE
AILIML