; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi07G000290 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G000290
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description30S ribosomal protein S1
Genome locationchr07:334623..340453
RNA-Seq ExpressionLsi07G000290
SyntenyLsi07G000290
Gene Ontology termsGO:0005840 - ribosome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR003029 - S1 domain
IPR012340 - Nucleic acid-binding, OB-fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7018465.1 30S ribosomal protein S1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]6.4e-10084.91Show/hide
Query:  VIQADERNKKLIFSEKEAAWSKFSEQVGVGDVYEARVGSVEDYGAFVHLRFADGLYHLTGLVHVSEVSWDLVQDVRDILSEVYDHCHAFHRWNAESVLLV
        VIQADE+NK LIFSEKEAAWSKFSE+VGVGDVYEARVGSVEDYGAFVHLRF+DGLYHLTGLVH+SEVSWDLVQDVRDILSE  +             ++ 
Subjt:  VIQADERNKKLIFSEKEAAWSKFSEQVGVGDVYEARVGSVEDYGAFVHLRFADGLYHLTGLVHVSEVSWDLVQDVRDILSEVYDHCHAFHRWNAESVLLV

Query:  SRRDKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPKSDSAIIPLPGLETIIEELLQEDGIVDIRINRQGFEKRVVSQDLQLWLSNAPSVEKKFT
          RDKSRITLSIKQLEEDPLLETLDKVIPQD SAEPDSFGPKSDS IIPLPGL+TI EELLQE+GI D+ INRQGFEKRVVSQDLQLWLSNAP VEKKFT
Subjt:  SRRDKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPKSDSAIIPLPGLETIIEELLQEDGIVDIRINRQGFEKRVVSQDLQLWLSNAPSVEKKFT

Query:  LLARAGRQVQEIQLTTSLDQEGIKRALQRVLE
        LLARAGRQVQEIQLTTSLDQEGIKRALQRVLE
Subjt:  LLARAGRQVQEIQLTTSLDQEGIKRALQRVLE

TYK17005.1 30S ribosomal protein S1 isoform X2 [Cucumis melo var. makuwa]1.2e-10184.68Show/hide
Query:  MWVIQADERNKKLIFSEKEAAWSKFSEQVGVGDVYEARVGSVEDYGAFVHLRFADGLYHLTGLVHVSEVSWDLVQDVRDILSEVYDHCHAFHRWNAESVL
        MWVIQADERNKKLIFSEKEA WSKFS QVGVGDVYEA+VGS+EDYGAFVHLRF+DGLYHLTGLVHVSEVSWDLVQDVRDILSE           +  +V 
Subjt:  MWVIQADERNKKLIFSEKEAAWSKFSEQVGVGDVYEARVGSVEDYGAFVHLRFADGLYHLTGLVHVSEVSWDLVQDVRDILSEVYDHCHAFHRWNAESVL

Query:  LVS-RRDKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPKSDSAIIPLPGLETIIEELLQEDGIVDIRINRQGFEKRVVSQDLQLWLSNAPSVEK
        +++  RDKSRITLSI+QLEEDPLLETLDKVIPQD SAEPDSFGPKSDS IIPLPGL TIIEEL QE+GIVD+R+NRQGFEKRVVSQDLQLWLSNAP +EK
Subjt:  LVS-RRDKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPKSDSAIIPLPGLETIIEELLQEDGIVDIRINRQGFEKRVVSQDLQLWLSNAPSVEK

Query:  KFTLLARAGRQVQEIQLTTSLDQEGIKRALQRVLE
        KFTLLARAGRQVQEIQLTTSLDQEGIKRALQRVLE
Subjt:  KFTLLARAGRQVQEIQLTTSLDQEGIKRALQRVLE

XP_022979820.1 uncharacterized protein LOC111479406 [Cucurbita maxima]3.8e-10085.34Show/hide
Query:  VIQADERNKKLIFSEKEAAWSKFSEQVGVGDVYEARVGSVEDYGAFVHLRFADGLYHLTGLVHVSEVSWDLVQDVRDILSEVYDHCHAFHRWNAESVLLV
        VIQADE+NK LIFSEKEAAWSKFSEQVGVGDVYEARVGSVEDYGAFVHLRF+DG YHLTGLVH+SEVSWDLVQDVRDILSE  +             +L 
Subjt:  VIQADERNKKLIFSEKEAAWSKFSEQVGVGDVYEARVGSVEDYGAFVHLRFADGLYHLTGLVHVSEVSWDLVQDVRDILSEVYDHCHAFHRWNAESVLLV

Query:  SRRDKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPKSDSAIIPLPGLETIIEELLQEDGIVDIRINRQGFEKRVVSQDLQLWLSNAPSVEKKFT
          RDKSRITLSIKQLEEDPLLETLDKVIPQD SAEPDSFGPKSDS IIPLPGL+TI EELLQE+GI D+ INRQGFEKRVVSQDLQLWLSNAP VEKKFT
Subjt:  SRRDKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPKSDSAIIPLPGLETIIEELLQEDGIVDIRINRQGFEKRVVSQDLQLWLSNAPSVEKKFT

Query:  LLARAGRQVQEIQLTTSLDQEGIKRALQRVLE
        LLARAGRQVQEIQLTTSLDQEGIKRALQRVLE
Subjt:  LLARAGRQVQEIQLTTSLDQEGIKRALQRVLE

XP_023526022.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111789621 [Cucurbita pepo subsp. pepo]2.2e-10085.34Show/hide
Query:  VIQADERNKKLIFSEKEAAWSKFSEQVGVGDVYEARVGSVEDYGAFVHLRFADGLYHLTGLVHVSEVSWDLVQDVRDILSEVYDHCHAFHRWNAESVLLV
        VIQADE+NK LIFSEKEAAWSKFSEQVGVGDVYEARVGSVEDYGAFVHLRF+DGLYHLTGLVH+SEVSWDLVQDVRDILSE  +             ++ 
Subjt:  VIQADERNKKLIFSEKEAAWSKFSEQVGVGDVYEARVGSVEDYGAFVHLRFADGLYHLTGLVHVSEVSWDLVQDVRDILSEVYDHCHAFHRWNAESVLLV

Query:  SRRDKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPKSDSAIIPLPGLETIIEELLQEDGIVDIRINRQGFEKRVVSQDLQLWLSNAPSVEKKFT
          RDKSRITLSIKQLEEDPLLETLDKVIPQD SAEPDSFGPKSDS IIPLPGL+TI EELLQE+GI D+ INRQGFEKRVVSQDLQLWLSNAP VEKKFT
Subjt:  SRRDKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPKSDSAIIPLPGLETIIEELLQEDGIVDIRINRQGFEKRVVSQDLQLWLSNAPSVEKKFT

Query:  LLARAGRQVQEIQLTTSLDQEGIKRALQRVLE
        LLARAGRQVQEIQLTTSLDQEGIKRALQRVLE
Subjt:  LLARAGRQVQEIQLTTSLDQEGIKRALQRVLE

XP_038897871.1 30S ribosomal protein S1 homolog B [Benincasa hispida]6.2e-10387.98Show/hide
Query:  VIQADERNKKLIFSEKEAAWSKFSEQVGVGDVYEARVGSVEDYGAFVHLRFADGLYHLTGLVHVSEVSWDLVQDVRDILSEVYDHCHAFHRWNAESVLLV
        VIQADERNKKLIFSEKEAAWSKFSEQVGVGDVYEARVGSVEDYGAFVHLRF+DGLYHLTGLVHVSEVSWDLVQDVRDILSE           +  +V ++
Subjt:  VIQADERNKKLIFSEKEAAWSKFSEQVGVGDVYEARVGSVEDYGAFVHLRFADGLYHLTGLVHVSEVSWDLVQDVRDILSEVYDHCHAFHRWNAESVLLV

Query:  S-RRDKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPKSDSAIIPLPGLETIIEELLQEDGIVDIRINRQGFEKRVVSQDLQLWLSNAPSVEKKF
        +  RDKSRITLSIKQLEEDPLLETLDKVIPQ GSAEPDSFGPKSDS I+PLPGLETIIEELLQEDGIVDI +NRQGFEKRVVSQDLQLWLSNAP VEKKF
Subjt:  S-RRDKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPKSDSAIIPLPGLETIIEELLQEDGIVDIRINRQGFEKRVVSQDLQLWLSNAPSVEKKF

Query:  TLLARAGRQVQEIQLTTSLDQEGIKRALQRVLE
        TLLARAGRQVQEIQLTTSLDQEGIKRALQRVLE
Subjt:  TLLARAGRQVQEIQLTTSLDQEGIKRALQRVLE

TrEMBL top hitse value%identityAlignment
A0A1S3BXL4 30S ribosomal protein S1 isoform X14.0e-10084.55Show/hide
Query:  VIQADERNKKLIFSEKEAAWSKFSEQVGVGDVYEARVGSVEDYGAFVHLRFADGLYHLTGLVHVSEVSWDLVQDVRDILSEVYDHCHAFHRWNAESVLLV
        VIQADERNKKLIFSEKEA WSKFS QVGVGDVYEA+VGS+EDYGAFVHLRF+DGLYHLTGLVHVSEVSWDLVQDVRDILSE           +  +V ++
Subjt:  VIQADERNKKLIFSEKEAAWSKFSEQVGVGDVYEARVGSVEDYGAFVHLRFADGLYHLTGLVHVSEVSWDLVQDVRDILSEVYDHCHAFHRWNAESVLLV

Query:  S-RRDKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPKSDSAIIPLPGLETIIEELLQEDGIVDIRINRQGFEKRVVSQDLQLWLSNAPSVEKKF
        +  RDKSRITLSI+QLEEDPLLETLDKVIPQD SAEPDSFGPKSDS IIPLPGL TIIEEL QE+GIVD+R+NRQGFEKRVVSQDLQLWLSNAP +EKKF
Subjt:  S-RRDKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPKSDSAIIPLPGLETIIEELLQEDGIVDIRINRQGFEKRVVSQDLQLWLSNAPSVEKKF

Query:  TLLARAGRQVQEIQLTTSLDQEGIKRALQRVLE
        TLLARAGRQVQEIQLTTSLDQEGIKRALQRVLE
Subjt:  TLLARAGRQVQEIQLTTSLDQEGIKRALQRVLE

A0A1S4E0T6 30S ribosomal protein S1 isoform X24.0e-10084.55Show/hide
Query:  VIQADERNKKLIFSEKEAAWSKFSEQVGVGDVYEARVGSVEDYGAFVHLRFADGLYHLTGLVHVSEVSWDLVQDVRDILSEVYDHCHAFHRWNAESVLLV
        VIQADERNKKLIFSEKEA WSKFS QVGVGDVYEA+VGS+EDYGAFVHLRF+DGLYHLTGLVHVSEVSWDLVQDVRDILSE           +  +V ++
Subjt:  VIQADERNKKLIFSEKEAAWSKFSEQVGVGDVYEARVGSVEDYGAFVHLRFADGLYHLTGLVHVSEVSWDLVQDVRDILSEVYDHCHAFHRWNAESVLLV

Query:  S-RRDKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPKSDSAIIPLPGLETIIEELLQEDGIVDIRINRQGFEKRVVSQDLQLWLSNAPSVEKKF
        +  RDKSRITLSI+QLEEDPLLETLDKVIPQD SAEPDSFGPKSDS IIPLPGL TIIEEL QE+GIVD+R+NRQGFEKRVVSQDLQLWLSNAP +EKKF
Subjt:  S-RRDKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPKSDSAIIPLPGLETIIEELLQEDGIVDIRINRQGFEKRVVSQDLQLWLSNAPSVEKKF

Query:  TLLARAGRQVQEIQLTTSLDQEGIKRALQRVLE
        TLLARAGRQVQEIQLTTSLDQEGIKRALQRVLE
Subjt:  TLLARAGRQVQEIQLTTSLDQEGIKRALQRVLE

A0A5A7TNY0 30S ribosomal protein S1 isoform X16.9e-10084.98Show/hide
Query:  VIQADERNKKLIFSEKEAAWSKFSEQVGVGDVYEARVGSVEDYGAFVHLRFADGLYHLTGLVHVSEVSWDLVQDVRDILSEVYDHCHAFHRWNAESVLLV
        VIQADERNKKLIFSEKEA WSKFS QVGVGDVYEA+VGS+EDYGAFVHLRF+DGLYHLTGLVHVSEVSWDLVQDVRDILSE  +            V+ V
Subjt:  VIQADERNKKLIFSEKEAAWSKFSEQVGVGDVYEARVGSVEDYGAFVHLRFADGLYHLTGLVHVSEVSWDLVQDVRDILSEVYDHCHAFHRWNAESVLLV

Query:  SRR-DKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPKSDSAIIPLPGLETIIEELLQEDGIVDIRINRQGFEKRVVSQDLQLWLSNAPSVEKKF
         R+ DKSRITLSI+QLEEDPLLETLDKVIPQD SAEPDSFGPKSDS IIPLPGL TIIEEL QE+GIVD+R+NRQGFEKRVVSQDLQLWLSNAP +EKKF
Subjt:  SRR-DKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPKSDSAIIPLPGLETIIEELLQEDGIVDIRINRQGFEKRVVSQDLQLWLSNAPSVEKKF

Query:  TLLARAGRQVQEIQLTTSLDQEGIKRALQRVLE
        TLLARAGRQVQEIQLTTSLDQEGIKRALQRVLE
Subjt:  TLLARAGRQVQEIQLTTSLDQEGIKRALQRVLE

A0A5D3CZQ4 30S ribosomal protein S1 isoform X25.6e-10284.68Show/hide
Query:  MWVIQADERNKKLIFSEKEAAWSKFSEQVGVGDVYEARVGSVEDYGAFVHLRFADGLYHLTGLVHVSEVSWDLVQDVRDILSEVYDHCHAFHRWNAESVL
        MWVIQADERNKKLIFSEKEA WSKFS QVGVGDVYEA+VGS+EDYGAFVHLRF+DGLYHLTGLVHVSEVSWDLVQDVRDILSE           +  +V 
Subjt:  MWVIQADERNKKLIFSEKEAAWSKFSEQVGVGDVYEARVGSVEDYGAFVHLRFADGLYHLTGLVHVSEVSWDLVQDVRDILSEVYDHCHAFHRWNAESVL

Query:  LVS-RRDKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPKSDSAIIPLPGLETIIEELLQEDGIVDIRINRQGFEKRVVSQDLQLWLSNAPSVEK
        +++  RDKSRITLSI+QLEEDPLLETLDKVIPQD SAEPDSFGPKSDS IIPLPGL TIIEEL QE+GIVD+R+NRQGFEKRVVSQDLQLWLSNAP +EK
Subjt:  LVS-RRDKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPKSDSAIIPLPGLETIIEELLQEDGIVDIRINRQGFEKRVVSQDLQLWLSNAPSVEK

Query:  KFTLLARAGRQVQEIQLTTSLDQEGIKRALQRVLE
        KFTLLARAGRQVQEIQLTTSLDQEGIKRALQRVLE
Subjt:  KFTLLARAGRQVQEIQLTTSLDQEGIKRALQRVLE

A0A6J1IUF3 uncharacterized protein LOC1114794061.8e-10085.34Show/hide
Query:  VIQADERNKKLIFSEKEAAWSKFSEQVGVGDVYEARVGSVEDYGAFVHLRFADGLYHLTGLVHVSEVSWDLVQDVRDILSEVYDHCHAFHRWNAESVLLV
        VIQADE+NK LIFSEKEAAWSKFSEQVGVGDVYEARVGSVEDYGAFVHLRF+DG YHLTGLVH+SEVSWDLVQDVRDILSE  +             +L 
Subjt:  VIQADERNKKLIFSEKEAAWSKFSEQVGVGDVYEARVGSVEDYGAFVHLRFADGLYHLTGLVHVSEVSWDLVQDVRDILSEVYDHCHAFHRWNAESVLLV

Query:  SRRDKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPKSDSAIIPLPGLETIIEELLQEDGIVDIRINRQGFEKRVVSQDLQLWLSNAPSVEKKFT
          RDKSRITLSIKQLEEDPLLETLDKVIPQD SAEPDSFGPKSDS IIPLPGL+TI EELLQE+GI D+ INRQGFEKRVVSQDLQLWLSNAP VEKKFT
Subjt:  SRRDKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPKSDSAIIPLPGLETIIEELLQEDGIVDIRINRQGFEKRVVSQDLQLWLSNAPSVEKKFT

Query:  LLARAGRQVQEIQLTTSLDQEGIKRALQRVLE
        LLARAGRQVQEIQLTTSLDQEGIKRALQRVLE
Subjt:  LLARAGRQVQEIQLTTSLDQEGIKRALQRVLE

SwissProt top hitse value%identityAlignment
P0AG68 30S ribosomal protein S11.5e-0624.1Show/hide
Query:  VIQADERNKKLIFSEKEA---AWSKFSEQVGVGDVYEARVGSVEDYGAFVHLRFADGLYHLTGLVHVSEVSWDLVQDVRDILSEVYDHCHAFHRWNAESV
        V+  DE  +++    K+     W +F+E    GD  E ++ S+ D+G F+ L   DG   + GLVH+S++SW++  +      +  D   A        V
Subjt:  VIQADERNKKLIFSEKEA---AWSKFSEQVGVGDVYEARVGSVEDYGAFVHLRFADGLYHLTGLVHVSEVSWDLVQDVRDILSEVYDHCHAFHRWNAESV

Query:  LLVSRRDKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPKSDSAIIPLPGLETIIEELLQEDGIVDIRINRQGFEKRVVSQDLQLWLSNAPSVEK
        +L    ++ RI+L +KQL EDP    +             +   K       +  ++     +   DG+       +    RV  +D  L LS    VE 
Subjt:  LLVSRRDKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPKSDSAIIPLPGLETIIEELLQEDGIVDIRINRQGFEKRVVSQDLQLWLSNAPSVEK

Query:  KFTLLARAGRQVQEIQLTTSLDQEGIKRALQRVLELNDTELKDEVIAES
        KFT + R  R +       + D+   K A+  V +  D    +  +AE+
Subjt:  KFTLLARAGRQVQEIQLTTSLDQEGIKRALQRVLELNDTELKDEVIAES

P0AG69 30S ribosomal protein S11.5e-0624.1Show/hide
Query:  VIQADERNKKLIFSEKEA---AWSKFSEQVGVGDVYEARVGSVEDYGAFVHLRFADGLYHLTGLVHVSEVSWDLVQDVRDILSEVYDHCHAFHRWNAESV
        V+  DE  +++    K+     W +F+E    GD  E ++ S+ D+G F+ L   DG   + GLVH+S++SW++  +      +  D   A        V
Subjt:  VIQADERNKKLIFSEKEA---AWSKFSEQVGVGDVYEARVGSVEDYGAFVHLRFADGLYHLTGLVHVSEVSWDLVQDVRDILSEVYDHCHAFHRWNAESV

Query:  LLVSRRDKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPKSDSAIIPLPGLETIIEELLQEDGIVDIRINRQGFEKRVVSQDLQLWLSNAPSVEK
        +L    ++ RI+L +KQL EDP    +             +   K       +  ++     +   DG+       +    RV  +D  L LS    VE 
Subjt:  LLVSRRDKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPKSDSAIIPLPGLETIIEELLQEDGIVDIRINRQGFEKRVVSQDLQLWLSNAPSVEK

Query:  KFTLLARAGRQVQEIQLTTSLDQEGIKRALQRVLELNDTELKDEVIAES
        KFT + R  R +       + D+   K A+  V +  D    +  +AE+
Subjt:  KFTLLARAGRQVQEIQLTTSLDQEGIKRALQRVLELNDTELKDEVIAES

P37985 30S ribosomal protein S11.5e-0630.33Show/hide
Query:  VIQADERNKKLIFSEKEA---AWSKFSEQVGVGDVYEARVGSVEDYGAFVHLRFADGLYHLTGLVHVSEVSWDLVQDVRDILSEVYDHCHAFHRWNAESV
        V+  DE  +++    K+     W +F+E    GD  E ++ S+ D+G F+ L   DG   + GLVH+S++SW++  +      +  D   A        V
Subjt:  VIQADERNKKLIFSEKEA---AWSKFSEQVGVGDVYEARVGSVEDYGAFVHLRFADGLYHLTGLVHVSEVSWDLVQDVRDILSEVYDHCHAFHRWNAESV

Query:  LLVSRRDKSRITLSIKQLEEDP
        +L    ++ RI+L +KQL EDP
Subjt:  LLVSRRDKSRITLSIKQLEEDP

P50889 30S ribosomal protein S11.6e-0833.58Show/hide
Query:  VIQADERNKKLIFSEKEAAWSKFSEQ-------VGVGDVYEARVGSVEDYGAFVHLRFADGLYHLTGLVHVSEVSWDLVQDVRDILSEVYDHCHAFHRWN
        VI+ D  N +LI S K  A  + + Q       + VG+V E  V  + D+GAFV L   D      GLVHVSE+S D V++  D+L++            
Subjt:  VIQADERNKKLIFSEKEAAWSKFSEQ-------VGVGDVYEARVGSVEDYGAFVHLRFADGLYHLTGLVHVSEVSWDLVQDVRDILSEVYDHCHAFHRWN

Query:  AESVLLVSRRDKSRITLSIKQLEEDPLLETLDKV
         +  +L    +K RI+LSIK  +  P  E  D++
Subjt:  AESVLLVSRRDKSRITLSIKQLEEDPLLETLDKV

Q9HZ71 30S ribosomal protein S12.3e-0731.71Show/hide
Query:  VIQADERNKKLIFSEKEA---AWSKFSEQVGVGDVYEARVGSVEDYGAFVHLRFADGLYHLTGLVHVSEVSWDLVQDVRDILSEVYDHCHAFHRWN-AES
        V+  DE  +++    K+     W  FS Q   GD     + S+ D+G F+ L   DG   + GLVH+S++SW+ V +         +    F + +  E+
Subjt:  VIQADERNKKLIFSEKEA---AWSKFSEQVGVGDVYEARVGSVEDYGAFVHLRFADGLYHLTGLVHVSEVSWDLVQDVRDILSEVYDHCHAFHRWN-AES

Query:  VLLVSRRDKSRITLSIKQLEEDP
        V+L    ++ RI+L IKQLE+DP
Subjt:  VLLVSRRDKSRITLSIKQLEEDP

Arabidopsis top hitse value%identityAlignment
AT1G12800.1 Nucleic acid-binding, OB-fold-like protein2.2e-1329.41Show/hide
Query:  VIQADERNKKLIFS----EKEAAWSK---FSEQVGVGDVYEARVGSVEDYGAFVHLRFADGLYHLTGLVHVSEVSWDLVQDVRDILSEVYDHCHAFHRWN
        V+ A+  ++KLIFS    E E    K      ++ VGDV +  +  +  +G F  L        +  LVH SEVSWD   D             ++ +  
Subjt:  VIQADERNKKLIFS----EKEAAWSK---FSEQVGVGDVYEARVGSVEDYGAFVHLRFADGLYHLTGLVHVSEVSWDLVQDVRDILSEVYDHCHAFHRWN

Query:  AESVLLVSRRD--KSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPKSDSAIIPL--PGLETIIEELLQEDGIVDIRINRQGFEKRVVSQDLQLWL
              V + D    RI LS+K++  DPL E L+ V+  D     D  G +  +A +    P +E++I+EL   +GI  +  +R  F    ++   Q+++
Subjt:  AESVLLVSRRD--KSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPKSDSAIIPL--PGLETIIEELLQEDGIVDIRINRQGFEKRVVSQDLQLWL

Query:  SNAPSVEKKFTLLARAGRQVQEIQLTTSLDQEGIKRAL
          AP  E ++ LLARAG +VQE+ +  SL +E +K  +
Subjt:  SNAPSVEKKFTLLARAGRQVQEIQLTTSLDQEGIKRAL

AT3G23700.1 Nucleic acid-binding proteins superfamily7.8e-8067.52Show/hide
Query:  VIQADERNKKLIFSEKEAAWSKFSEQVGVGDVYEARVGSVEDYGAFVHLRFADGLYHLTGLVHVSEVSWDLVQDVRDILSEVYDHCHAFHRWNAESVLLV
        V+QADE N+KLI SEK A W K+S+ V VGDV+  RVGSVEDYGAF+HLRF DGLYHLTGLVHVSEVSWD VQDVRD+L           R   E  ++V
Subjt:  VIQADERNKKLIFSEKEAAWSKFSEQVGVGDVYEARVGSVEDYGAFVHLRFADGLYHLTGLVHVSEVSWDLVQDVRDILSEVYDHCHAFHRWNAESVLLV

Query:  SR--RDKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPKSDSAIIPLPGLETIIEELLQEDGIVDIRINRQGFEKRVVSQDLQLWLSNAPSVEKK
        +   ++KSRITLSIKQLE+DPLLETLDKVI +D S    S    +   I PLPGLETI+EELL+EDGI  ++INRQGFEKRVVSQDLQLWLSN P  + K
Subjt:  SR--RDKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPKSDSAIIPLPGLETIIEELLQEDGIVDIRINRQGFEKRVVSQDLQLWLSNAPSVEKK

Query:  FTLLARAGRQVQEIQLTTSLDQEGIKRALQRVLE
        F LLARAGRQVQEI LTTSL+Q GIK+ALQ VLE
Subjt:  FTLLARAGRQVQEIQLTTSLDQEGIKRALQRVLE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGGTAATCCAAGCAGATGAGAGAAACAAGAAATTGATATTTTCAGAGAAGGAAGCTGCGTGGTCAAAGTTTTCTGAGCAAGTTGGTGTGGGAGATGTCTATGAAGC
TAGAGTTGGATCTGTGGAGGATTATGGTGCCTTTGTACATCTACGTTTCGCTGATGGTCTTTATCATCTTACTGGGCTGGTACATGTATCAGAAGTTTCATGGGATCTAG
TTCAAGATGTTAGAGACATATTAAGTGAGGTCTATGACCATTGCCATGCATTTCACCGTTGGAATGCTGAATCTGTCTTATTGGTTTCACGCAGGGATAAGTCCAGGATC
ACATTGTCGATCAAGCAACTCGAGGAAGATCCACTTTTAGAAACATTGGACAAAGTAATACCGCAGGATGGTTCTGCTGAACCTGATTCTTTTGGACCTAAAAGCGACAG
TGCAATTATACCCCTCCCTGGACTTGAAACAATAATTGAAGAGCTACTGCAGGAAGATGGTATAGTAGATATTCGTATCAACCGACAAGGATTTGAGAAACGGGTGGTTT
CACAAGACCTACAACTTTGGCTATCAAATGCACCTTCTGTTGAAAAGAAGTTCACTCTCCTTGCTCGTGCTGGGAGGCAGGTTCAAGAAATACAGCTGACAACATCACTC
GATCAGGAAGGTATAAAAAGGGCACTGCAGCGAGTGTTGGAACTCAACGACACCGAGCTTAAAGATGAGGTAATAGCAGAGTCAATGACACCAGGAAGACAAGGCGGCGG
TGAAGTAGATATCGAGCTTGAAGATCTCAAGTTTGATATGAAAGATGGATAG
mRNA sequenceShow/hide mRNA sequence
ATGTGGGTAATCCAAGCAGATGAGAGAAACAAGAAATTGATATTTTCAGAGAAGGAAGCTGCGTGGTCAAAGTTTTCTGAGCAAGTTGGTGTGGGAGATGTCTATGAAGC
TAGAGTTGGATCTGTGGAGGATTATGGTGCCTTTGTACATCTACGTTTCGCTGATGGTCTTTATCATCTTACTGGGCTGGTACATGTATCAGAAGTTTCATGGGATCTAG
TTCAAGATGTTAGAGACATATTAAGTGAGGTCTATGACCATTGCCATGCATTTCACCGTTGGAATGCTGAATCTGTCTTATTGGTTTCACGCAGGGATAAGTCCAGGATC
ACATTGTCGATCAAGCAACTCGAGGAAGATCCACTTTTAGAAACATTGGACAAAGTAATACCGCAGGATGGTTCTGCTGAACCTGATTCTTTTGGACCTAAAAGCGACAG
TGCAATTATACCCCTCCCTGGACTTGAAACAATAATTGAAGAGCTACTGCAGGAAGATGGTATAGTAGATATTCGTATCAACCGACAAGGATTTGAGAAACGGGTGGTTT
CACAAGACCTACAACTTTGGCTATCAAATGCACCTTCTGTTGAAAAGAAGTTCACTCTCCTTGCTCGTGCTGGGAGGCAGGTTCAAGAAATACAGCTGACAACATCACTC
GATCAGGAAGGTATAAAAAGGGCACTGCAGCGAGTGTTGGAACTCAACGACACCGAGCTTAAAGATGAGGTAATAGCAGAGTCAATGACACCAGGAAGACAAGGCGGCGG
TGAAGTAGATATCGAGCTTGAAGATCTCAAGTTTGATATGAAAGATGGATAG
Protein sequenceShow/hide protein sequence
MWVIQADERNKKLIFSEKEAAWSKFSEQVGVGDVYEARVGSVEDYGAFVHLRFADGLYHLTGLVHVSEVSWDLVQDVRDILSEVYDHCHAFHRWNAESVLLVSRRDKSRI
TLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPKSDSAIIPLPGLETIIEELLQEDGIVDIRINRQGFEKRVVSQDLQLWLSNAPSVEKKFTLLARAGRQVQEIQLTTSL
DQEGIKRALQRVLELNDTELKDEVIAESMTPGRQGGGEVDIELEDLKFDMKDG