; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi07G000420 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G000420
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionmyb-like transcription factor family protein
Genome locationchr07:492325..493249
RNA-Seq ExpressionLsi07G000420
SyntenyLsi07G000420
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
InterPro domainsIPR001005 - SANT/Myb domain
IPR006447 - Myb domain, plants
IPR009057 - Homeobox-like domain superfamily
IPR017930 - Myb domain
IPR043363 - Transcription factor DIVARICATA-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044592.1 myb-like protein J [Cucumis melo var. makuwa]3.4e-3950.7Show/hide
Query:  CSPSTLSTTHNNNYLPNDPIEYTGLLSDVVNLNSAN---------------------MTSNISSPSTLPTTHNNDLSANLIGYTGLLFDSVKMRPLVPAV
        CSPS LSTTHN +   ND I + G LSDVVN +S                        TS+  SPS++ TTHNND  A+   YTGLL D VKMRP VP +
Subjt:  CSPSTLSTTHNNNYLPNDPIEYTGLLSDVVNLNSAN---------------------MTSNISSPSTLPTTHNNDLSANLIGYTGLLFDSVKMRPLVPAV

Query:  SSFLKTKLSSSSLLPLPPVSHNS-----------WSIEEHKLFLARMHCFRKGQWKKIANNVVITRTHTQVASHAQKFF-HHQTLPEHERKRPSIHDITT
        SS   +  + SSL P PP SHNS           WS++EH+LFLA M    K +WKKIA++VVIT+TH QVASHAQK+F H   L +H+RKR SIHDITT
Subjt:  SSFLKTKLSSSSLLPLPPVSHNS-----------WSIEEHKLFLARMHCFRKGQWKKIANNVVITRTHTQVASHAQKFF-HHQTLPEHERKRPSIHDITT

Query:  VEPQLLSQVQARL
        VEP+ L++V+A L
Subjt:  VEPQLLSQVQARL

KGN53075.1 hypothetical protein Csa_014760 [Cucumis sativus]5.6e-3447.93Show/hide
Query:  CSPSTLSTTHNNNYLPNDPIEY-TGLLSDVVNLNSAN------------------------MTSNISSPSTLPTTHNNDLSANLIGYTGLLFD--SVKMR
        CSPSTLST HN++   ND I Y  G LSDVVN NS                           TS+  SPST   THNN   A+   YTGLL D  +  +R
Subjt:  CSPSTLSTTHNNNYLPNDPIEY-TGLLSDVVNLNSAN------------------------MTSNISSPSTLPTTHNNDLSANLIGYTGLLFD--SVKMR

Query:  PLVPAVSSFLKTKLSSSSLLPLPPVSHNS---------WSIEEHKLFLARMHCFRKGQWKKIANNVVITRTHTQVASHAQKFFHHQTLPEHERKRPSIHD
        P VP +S      L SSSL P P +S NS         WSI EHKLFLA M    +G WKKIAN VV+T+THTQVASHAQK+F  QT  +H  KR SIHD
Subjt:  PLVPAVSSFLKTKLSSSSLLPLPPVSHNS---------WSIEEHKLFLARMHCFRKGQWKKIANNVVITRTHTQVASHAQKFFHHQTLPEHERKRPSIHD

Query:  ITTVEPQLLSQVQARLA
        ITT EP+  +  ++R+A
Subjt:  ITTVEPQLLSQVQARLA

TYK16992.1 myb-like protein J [Cucumis melo var. makuwa]1.3e-2255.37Show/hide
Query:  MRPLVPAVSSFLKTKLSSSSLLPLPPVSHNS-----------WSIEEHKLFLARMHCFRKGQWKKIANNVVITRTHTQVASHAQKFF-HHQTLPEHERKR
        MRP VP +SS   +  + SSL P PP SHNS           WS++EH+LFLA M    K +WKKIA++VVIT+TH QVASHAQK+F H   L +H+RKR
Subjt:  MRPLVPAVSSFLKTKLSSSSLLPLPPVSHNS-----------WSIEEHKLFLARMHCFRKGQWKKIANNVVITRTHTQVASHAQKFF-HHQTLPEHERKR

Query:  PSIHDITTVEPQLLSQVQARL
         SIHDITTVEP+ L++V+A L
Subjt:  PSIHDITTVEPQLLSQVQARL

XP_008454484.1 PREDICTED: myb-like protein J [Cucumis melo]3.4e-3950.7Show/hide
Query:  CSPSTLSTTHNNNYLPNDPIEYTGLLSDVVNLNSAN---------------------MTSNISSPSTLPTTHNNDLSANLIGYTGLLFDSVKMRPLVPAV
        CSPS LSTTHN +   ND I + G LSDVVN +S                        TS+  SPS++ TTHNND  A+   YTGLL D VKMRP VP +
Subjt:  CSPSTLSTTHNNNYLPNDPIEYTGLLSDVVNLNSAN---------------------MTSNISSPSTLPTTHNNDLSANLIGYTGLLFDSVKMRPLVPAV

Query:  SSFLKTKLSSSSLLPLPPVSHNS-----------WSIEEHKLFLARMHCFRKGQWKKIANNVVITRTHTQVASHAQKFF-HHQTLPEHERKRPSIHDITT
        SS   +  + SSL P PP SHNS           WS++EH+LFLA M    K +WKKIA++VVIT+TH QVASHAQK+F H   L +H+RKR SIHDITT
Subjt:  SSFLKTKLSSSSLLPLPPVSHNS-----------WSIEEHKLFLARMHCFRKGQWKKIANNVVITRTHTQVASHAQKFF-HHQTLPEHERKRPSIHDITT

Query:  VEPQLLSQVQARL
        VEP+ L++V+A L
Subjt:  VEPQLLSQVQARL

XP_011654326.2 myb-like protein J [Cucumis sativus]4.6e-3649.77Show/hide
Query:  CSPSTLSTTHNNNYLPNDPIEY-TGLLSDVVNLNSAN------------------------MTSNISSPSTLPTTHNNDLSANLIGYTGLLFD--SVKMR
        CSPSTLSTTHN++   ND I Y  G LSDVVN NS                           TS+  SPST   THNN   A+   YTGLL D  +  +R
Subjt:  CSPSTLSTTHNNNYLPNDPIEY-TGLLSDVVNLNSAN------------------------MTSNISSPSTLPTTHNNDLSANLIGYTGLLFD--SVKMR

Query:  PLVPAVSSFLKTKLSSSSLLPLPPVSHNS---------WSIEEHKLFLARMHCFRKGQWKKIANNVVITRTHTQVASHAQKFFHHQTLPEHERKRPSIHD
        P VP +S      L SSSL P P +S NS         WSI EHKLFLA M    +G WKKIAN VVIT+THTQVASHAQK+F  QT P+H  KR SIHD
Subjt:  PLVPAVSSFLKTKLSSSSLLPLPPVSHNS---------WSIEEHKLFLARMHCFRKGQWKKIANNVVITRTHTQVASHAQKFFHHQTLPEHERKRPSIHD

Query:  ITTVEPQLLSQVQARLA
        ITT EP+  +  +AR+A
Subjt:  ITTVEPQLLSQVQARLA

TrEMBL top hitse value%identityAlignment
A0A0A0KTY5 HTH myb-type domain-containing protein2.7e-3447.93Show/hide
Query:  CSPSTLSTTHNNNYLPNDPIEY-TGLLSDVVNLNSAN------------------------MTSNISSPSTLPTTHNNDLSANLIGYTGLLFD--SVKMR
        CSPSTLST HN++   ND I Y  G LSDVVN NS                           TS+  SPST   THNN   A+   YTGLL D  +  +R
Subjt:  CSPSTLSTTHNNNYLPNDPIEY-TGLLSDVVNLNSAN------------------------MTSNISSPSTLPTTHNNDLSANLIGYTGLLFD--SVKMR

Query:  PLVPAVSSFLKTKLSSSSLLPLPPVSHNS---------WSIEEHKLFLARMHCFRKGQWKKIANNVVITRTHTQVASHAQKFFHHQTLPEHERKRPSIHD
        P VP +S      L SSSL P P +S NS         WSI EHKLFLA M    +G WKKIAN VV+T+THTQVASHAQK+F  QT  +H  KR SIHD
Subjt:  PLVPAVSSFLKTKLSSSSLLPLPPVSHNS---------WSIEEHKLFLARMHCFRKGQWKKIANNVVITRTHTQVASHAQKFFHHQTLPEHERKRPSIHD

Query:  ITTVEPQLLSQVQARLA
        ITT EP+  +  ++R+A
Subjt:  ITTVEPQLLSQVQARLA

A0A0A0KYZ4 HTH myb-type domain-containing protein2.2e-3649.77Show/hide
Query:  CSPSTLSTTHNNNYLPNDPIEY-TGLLSDVVNLNSAN------------------------MTSNISSPSTLPTTHNNDLSANLIGYTGLLFD--SVKMR
        CSPSTLSTTHN++   ND I Y  G LSDVVN NS                           TS+  SPST   THNN   A+   YTGLL D  +  +R
Subjt:  CSPSTLSTTHNNNYLPNDPIEY-TGLLSDVVNLNSAN------------------------MTSNISSPSTLPTTHNNDLSANLIGYTGLLFD--SVKMR

Query:  PLVPAVSSFLKTKLSSSSLLPLPPVSHNS---------WSIEEHKLFLARMHCFRKGQWKKIANNVVITRTHTQVASHAQKFFHHQTLPEHERKRPSIHD
        P VP +S      L SSSL P P +S NS         WSI EHKLFLA M    +G WKKIAN VVIT+THTQVASHAQK+F  QT P+H  KR SIHD
Subjt:  PLVPAVSSFLKTKLSSSSLLPLPPVSHNS---------WSIEEHKLFLARMHCFRKGQWKKIANNVVITRTHTQVASHAQKFFHHQTLPEHERKRPSIHD

Query:  ITTVEPQLLSQVQARLA
        ITT EP+  +  +AR+A
Subjt:  ITTVEPQLLSQVQARLA

A0A1S3BZH7 myb-like protein J1.6e-3950.7Show/hide
Query:  CSPSTLSTTHNNNYLPNDPIEYTGLLSDVVNLNSAN---------------------MTSNISSPSTLPTTHNNDLSANLIGYTGLLFDSVKMRPLVPAV
        CSPS LSTTHN +   ND I + G LSDVVN +S                        TS+  SPS++ TTHNND  A+   YTGLL D VKMRP VP +
Subjt:  CSPSTLSTTHNNNYLPNDPIEYTGLLSDVVNLNSAN---------------------MTSNISSPSTLPTTHNNDLSANLIGYTGLLFDSVKMRPLVPAV

Query:  SSFLKTKLSSSSLLPLPPVSHNS-----------WSIEEHKLFLARMHCFRKGQWKKIANNVVITRTHTQVASHAQKFF-HHQTLPEHERKRPSIHDITT
        SS   +  + SSL P PP SHNS           WS++EH+LFLA M    K +WKKIA++VVIT+TH QVASHAQK+F H   L +H+RKR SIHDITT
Subjt:  SSFLKTKLSSSSLLPLPPVSHNS-----------WSIEEHKLFLARMHCFRKGQWKKIANNVVITRTHTQVASHAQKFF-HHQTLPEHERKRPSIHDITT

Query:  VEPQLLSQVQARL
        VEP+ L++V+A L
Subjt:  VEPQLLSQVQARL

A0A5A7TMR3 Myb-like protein J1.6e-3950.7Show/hide
Query:  CSPSTLSTTHNNNYLPNDPIEYTGLLSDVVNLNSAN---------------------MTSNISSPSTLPTTHNNDLSANLIGYTGLLFDSVKMRPLVPAV
        CSPS LSTTHN +   ND I + G LSDVVN +S                        TS+  SPS++ TTHNND  A+   YTGLL D VKMRP VP +
Subjt:  CSPSTLSTTHNNNYLPNDPIEYTGLLSDVVNLNSAN---------------------MTSNISSPSTLPTTHNNDLSANLIGYTGLLFDSVKMRPLVPAV

Query:  SSFLKTKLSSSSLLPLPPVSHNS-----------WSIEEHKLFLARMHCFRKGQWKKIANNVVITRTHTQVASHAQKFF-HHQTLPEHERKRPSIHDITT
        SS   +  + SSL P PP SHNS           WS++EH+LFLA M    K +WKKIA++VVIT+TH QVASHAQK+F H   L +H+RKR SIHDITT
Subjt:  SSFLKTKLSSSSLLPLPPVSHNS-----------WSIEEHKLFLARMHCFRKGQWKKIANNVVITRTHTQVASHAQKFF-HHQTLPEHERKRPSIHDITT

Query:  VEPQLLSQVQARL
        VEP+ L++V+A L
Subjt:  VEPQLLSQVQARL

A0A5D3CZL0 Myb-like protein J6.2e-2355.37Show/hide
Query:  MRPLVPAVSSFLKTKLSSSSLLPLPPVSHNS-----------WSIEEHKLFLARMHCFRKGQWKKIANNVVITRTHTQVASHAQKFF-HHQTLPEHERKR
        MRP VP +SS   +  + SSL P PP SHNS           WS++EH+LFLA M    K +WKKIA++VVIT+TH QVASHAQK+F H   L +H+RKR
Subjt:  MRPLVPAVSSFLKTKLSSSSLLPLPPVSHNS-----------WSIEEHKLFLARMHCFRKGQWKKIANNVVITRTHTQVASHAQKFF-HHQTLPEHERKR

Query:  PSIHDITTVEPQLLSQVQARL
         SIHDITTVEP+ L++V+A L
Subjt:  PSIHDITTVEPQLLSQVQARL

SwissProt top hitse value%identityAlignment
B8A9B2 Transcription factor MYBS12.1e-1247.67Show/hide
Query:  WSIEEHKLFLARMHCFRKGQWKKIANNVVITRTHTQVASHAQKFFHHQTLPEHERKRPSIHDITTVEPQLLSQVQARLALPNVSQQ
        W+ EEH+LFL  +  F KG W+ I+ N VI+RT TQVASHAQK+F        +R+R SIHDIT+V      QV A+   P    Q
Subjt:  WSIEEHKLFLARMHCFRKGQWKKIANNVVITRTHTQVASHAQKFFHHQTLPEHERKRPSIHDITTVEPQLLSQVQARLALPNVSQQ

Q2V9B0 Transcription factor MYB1R11.5e-1044.19Show/hide
Query:  WSIEEHKLFLARMHCFRKGQWKKIANNVVITRTHTQVASHAQKFFHHQTLPEHERKRPSIHDITT--VEPQLLSQVQARLALPNVS
        W+ EEHKLFL  +    KG W+ I+ N V TRT TQVASHAQK+F  ++     R+R S+ DITT  V    + +V+ +  +P V+
Subjt:  WSIEEHKLFLARMHCFRKGQWKKIANNVVITRTHTQVASHAQKFFHHQTLPEHERKRPSIHDITT--VEPQLLSQVQARLALPNVS

Q8LH59 Transcription factor MYBS12.1e-1247.67Show/hide
Query:  WSIEEHKLFLARMHCFRKGQWKKIANNVVITRTHTQVASHAQKFFHHQTLPEHERKRPSIHDITTVEPQLLSQVQARLALPNVSQQ
        W+ EEH+LFL  +  F KG W+ I+ N VI+RT TQVASHAQK+F        +R+R SIHDIT+V      QV A+   P    Q
Subjt:  WSIEEHKLFLARMHCFRKGQWKKIANNVVITRTHTQVASHAQKFFHHQTLPEHERKRPSIHDITTVEPQLLSQVQARLALPNVSQQ

Q8S9H7 Transcription factor DIVARICATA1.5e-1357.58Show/hide
Query:  WSIEEHKLFLARMHCFRKGQWKKIANNVVITRTHTQVASHAQKFFHHQTLPEHERKRPSIHDITTV
        W+ EEHKLFL  +  + KG W+ I+ N VITRT TQVASHAQK+F  Q     +++R SIHDITTV
Subjt:  WSIEEHKLFLARMHCFRKGQWKKIANNVVITRTHTQVASHAQKFFHHQTLPEHERKRPSIHDITTV

Q9FNN6 Transcription factor SRM12.8e-1250.75Show/hide
Query:  SWSIEEHKLFLARMHCFRKGQWKKIANNVVITRTHTQVASHAQKFFHHQTLPEHERKRPSIHDITTV
        +W+ +EH+LFL  +  + KG W+ I+ N V+TRT TQVASHAQK+F        +R+R SIHDIT+V
Subjt:  SWSIEEHKLFLARMHCFRKGQWKKIANNVVITRTHTQVASHAQKFFHHQTLPEHERKRPSIHDITTV

Arabidopsis top hitse value%identityAlignment
AT1G49010.1 Duplicated homeodomain-like superfamily protein1.8e-1455.07Show/hide
Query:  WSIEEHKLFLARMHCFRKGQWKKIANNVVITRTHTQVASHAQKFFHHQTLPEHERKRPSIHDITTVEPQ
        W+ EEH+LFL  +  F KG W+ I+ N VI+RT TQVASHAQK+F        +R+R SIHDITTV  Q
Subjt:  WSIEEHKLFLARMHCFRKGQWKKIANNVVITRTHTQVASHAQKFFHHQTLPEHERKRPSIHDITTVEPQ

AT2G38090.1 Duplicated homeodomain-like superfamily protein2.0e-1354.55Show/hide
Query:  WSIEEHKLFLARMHCFRKGQWKKIANNVVITRTHTQVASHAQKFFHHQTLPEHERKRPSIHDITTV
        W+ EEH+ FL  +  + KG W+ IA N V TRT TQVASHAQK+F  Q     +++R SIHDITTV
Subjt:  WSIEEHKLFLARMHCFRKGQWKKIANNVVITRTHTQVASHAQKFFHHQTLPEHERKRPSIHDITTV

AT5G04760.1 Duplicated homeodomain-like superfamily protein1.9e-1658.57Show/hide
Query:  WSIEEHKLFLARMHCFRKGQWKKIANNVVITRTHTQVASHAQKFFHHQTLPEHERKRPSIHDITTVEPQL
        W+  EHKLFL  +  + KG W+ I+ NVV+TRT TQVASHAQK+F  Q   + ERKR SIHDITTV+  L
Subjt:  WSIEEHKLFLARMHCFRKGQWKKIANNVVITRTHTQVASHAQKFFHHQTLPEHERKRPSIHDITTVEPQL

AT5G23650.1 Homeodomain-like transcriptional regulator5.2e-1449.33Show/hide
Query:  WSIEEHKLFLARMHCFRKGQWKKIANNVVITRTHTQVASHAQKFFHHQTLPEHERKRPSIHDITTVEPQLLSQVQ
        W   EH+ FL  +  + KG W+ I+ + V+TRT TQVASHAQK+F H    + +RKRPSIHDIT  E + +S  Q
Subjt:  WSIEEHKLFLARMHCFRKGQWKKIANNVVITRTHTQVASHAQKFFHHQTLPEHERKRPSIHDITTVEPQLLSQVQ

AT5G58900.1 Homeodomain-like transcriptional regulator1.1e-1457.58Show/hide
Query:  WSIEEHKLFLARMHCFRKGQWKKIANNVVITRTHTQVASHAQKFFHHQTLPEHERKRPSIHDITTV
        W+ EEHKLFL  +  + KG W+ I+ N VITRT TQVASHAQK+F  Q     +++R SIHDITTV
Subjt:  WSIEEHKLFLARMHCFRKGQWKKIANNVVITRTHTQVASHAQKFFHHQTLPEHERKRPSIHDITTV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGTTTTGTTCTCCTTCTACTCTTTCGACGACTCATAATAATAATTACTTACCTAATGATCCTATTGAATATACTGGTTTGCTCTCCGATGTCGTCAATCTCAACTC
TGCTAATATGACATCGAATATTTCTTCTCCTTCCACTCTCCCAACAACACATAATAATGACTTATCTGCCAATCTCATTGGATATACCGGTTTGCTTTTCGACTCCGTTA
AAATGAGGCCGCTTGTTCCAGCAGTTTCATCTTTTCTAAAAACAAAATTGTCATCGTCATCGCTACTACCACTACCACCAGTGTCACACAACTCGTGGAGCATAGAGGAG
CACAAATTATTTCTAGCGAGGATGCACTGTTTTCGCAAAGGTCAATGGAAAAAGATCGCAAACAACGTAGTGATTACAAGGACACACACGCAAGTGGCTAGTCATGCCCA
AAAGTTCTTTCATCATCAAACCTTACCCGAACATGAGCGGAAGAGACCAAGTATTCACGATATCACCACTGTCGAGCCCCAACTTTTATCGCAGGTGCAAGCACGTCTAG
CTTTACCTAATGTGTCTCAACAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTGTTTTGTTCTCCTTCTACTCTTTCGACGACTCATAATAATAATTACTTACCTAATGATCCTATTGAATATACTGGTTTGCTCTCCGATGTCGTCAATCTCAACTC
TGCTAATATGACATCGAATATTTCTTCTCCTTCCACTCTCCCAACAACACATAATAATGACTTATCTGCCAATCTCATTGGATATACCGGTTTGCTTTTCGACTCCGTTA
AAATGAGGCCGCTTGTTCCAGCAGTTTCATCTTTTCTAAAAACAAAATTGTCATCGTCATCGCTACTACCACTACCACCAGTGTCACACAACTCGTGGAGCATAGAGGAG
CACAAATTATTTCTAGCGAGGATGCACTGTTTTCGCAAAGGTCAATGGAAAAAGATCGCAAACAACGTAGTGATTACAAGGACACACACGCAAGTGGCTAGTCATGCCCA
AAAGTTCTTTCATCATCAAACCTTACCCGAACATGAGCGGAAGAGACCAAGTATTCACGATATCACCACTGTCGAGCCCCAACTTTTATCGCAGGTGCAAGCACGTCTAG
CTTTACCTAATGTGTCTCAACAGTAA
Protein sequenceShow/hide protein sequence
MVFCSPSTLSTTHNNNYLPNDPIEYTGLLSDVVNLNSANMTSNISSPSTLPTTHNNDLSANLIGYTGLLFDSVKMRPLVPAVSSFLKTKLSSSSLLPLPPVSHNSWSIEE
HKLFLARMHCFRKGQWKKIANNVVITRTHTQVASHAQKFFHHQTLPEHERKRPSIHDITTVEPQLLSQVQARLALPNVSQQ