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Lsi07G000430 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G000430
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr07:497201..497839
RNA-Seq ExpressionLsi07G000430
SyntenyLsi07G000430
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582046.1 Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha, partial [Cucurbita argyrosperma subsp. sororia]1.3e-1033.19Show/hide
Query:  LPSSSVLP----------------NQTLQFDQSSFPSYYQIDNTVFEQSPMTMTPPPLPQAMNIPPNQAMTINR----PGEYKTNAEIICENYLKQYFS-
        LPSSSV P                NQ  QFD+          +  FE +  TMT       MNI  N ++  N+    PGE KT AEI  +NYLK Y + 
Subjt:  LPSSSVLP----------------NQTLQFDQSSFPSYYQIDNTVFEQSPMTMTPPPLPQAMNIPPNQAMTINR----PGEYKTNAEIICENYLKQYFS-

Query:  --PYVTDHNVVDYSNYVDPNHVDPSLINRSGEAKL---NYDD---SDFSELDYLNSNDIQTTEQNLSALPPSDHFLSSDVVNLYSTSNWPLAAESLPPLP
          P          SNYVDP+ + P + N   +A+    NY+    ++FS+ ++LN  DI+   QNLS   PS  ++ +++ ++ ++    L  ESLP  P
Subjt:  --PYVTDHNVVDYSNYVDPNHVDPSLINRSGEAKL---NYDD---SDFSELDYLNSNDIQTTEQNLSALPPSDHFLSSDVVNLYSTSNWPLAAESLPPLP

Query:  PPPPNGAVAAINGEASSSKIKKKNWC
        PPPP      I     +S I   NWC
Subjt:  PPPPNGAVAAINGEASSSKIKKKNWC
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAATAACAATAGCTACTTGCCTTCTTCCTCTGTTCTTCCAAATCAGACTCTACAGTTTGATCAATCGTCATTCCCTTCATATTACCAGATCGATAATACGGTGTT
TGAGCAGTCGCCGATGACAATGACGCCGCCTCCTCTGCCGCAGGCGATGAATATTCCGCCAAATCAAGCAATGACAATTAACCGCCCTGGCGAGTACAAAACAAATGCGG
AAATTATTTGTGAGAATTATCTGAAGCAATATTTCAGTCCGTATGTTACCGATCATAATGTTGTCGATTATTCTAATTATGTTGATCCTAATCATGTTGATCCGTCGTTA
ATCAATCGGAGCGGCGAGGCAAAGTTGAATTACGATGATTCGGATTTCTCAGAGCTTGATTACTTGAACTCCAATGATATTCAGACCACAGAGCAGAATTTATCTGCTCT
GCCTCCGTCTGATCACTTCCTTTCTTCCGACGTCGTCAATTTATACTCCACAAGTAATTGGCCGCTTGCGGCGGAGAGTTTGCCGCCGTTGCCGCCTCCTCCGCCCAATG
GAGCTGTAGCTGCGATTAATGGCGAAGCCAGCTCATCGAAGATCAAGAAGAAAAATTGGTGCGAATTGGAGCACCGGTATGGAAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGATAATAACAATAGCTACTTGCCTTCTTCCTCTGTTCTTCCAAATCAGACTCTACAGTTTGATCAATCGTCATTCCCTTCATATTACCAGATCGATAATACGGTGTT
TGAGCAGTCGCCGATGACAATGACGCCGCCTCCTCTGCCGCAGGCGATGAATATTCCGCCAAATCAAGCAATGACAATTAACCGCCCTGGCGAGTACAAAACAAATGCGG
AAATTATTTGTGAGAATTATCTGAAGCAATATTTCAGTCCGTATGTTACCGATCATAATGTTGTCGATTATTCTAATTATGTTGATCCTAATCATGTTGATCCGTCGTTA
ATCAATCGGAGCGGCGAGGCAAAGTTGAATTACGATGATTCGGATTTCTCAGAGCTTGATTACTTGAACTCCAATGATATTCAGACCACAGAGCAGAATTTATCTGCTCT
GCCTCCGTCTGATCACTTCCTTTCTTCCGACGTCGTCAATTTATACTCCACAAGTAATTGGCCGCTTGCGGCGGAGAGTTTGCCGCCGTTGCCGCCTCCTCCGCCCAATG
GAGCTGTAGCTGCGATTAATGGCGAAGCCAGCTCATCGAAGATCAAGAAGAAAAATTGGTGCGAATTGGAGCACCGGTATGGAAAATAA
Protein sequenceShow/hide protein sequence
MDNNNSYLPSSSVLPNQTLQFDQSSFPSYYQIDNTVFEQSPMTMTPPPLPQAMNIPPNQAMTINRPGEYKTNAEIICENYLKQYFSPYVTDHNVVDYSNYVDPNHVDPSL
INRSGEAKLNYDDSDFSELDYLNSNDIQTTEQNLSALPPSDHFLSSDVVNLYSTSNWPLAAESLPPLPPPPPNGAVAAINGEASSSKIKKKNWCELEHRYGK