; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi07G000450 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G000450
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionRibonuclease
Genome locationchr07:502947..506686
RNA-Seq ExpressionLsi07G000450
SyntenyLsi07G000450
Gene Ontology termsGO:0006298 - mismatch repair (biological process)
GO:0043137 - DNA replication, removal of RNA primer (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0032299 - ribonuclease H2 complex (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001352 - Ribonuclease HII/HIII
IPR004649 - Ribonuclease H2, subunit A
IPR012337 - Ribonuclease H-like superfamily
IPR023160 - Ribonuclease HII, helix-loop-helix cap domain superfamily
IPR024567 - Ribonuclease HII/HIII domain
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582048.1 Ribonuclease H2 subunit A, partial [Cucurbita argyrosperma subsp. sororia]1.6e-14984.38Show/hide
Query:  MSSQYPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN
        MSSQ PLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYC  SYLKELSSLNFADSKTLKEEKREELFE LK NESIGWAVDVIDPRELSSKMLNKVKINLN
Subjt:  MSSQYPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHDSAMGLVTKVLGMGVLLTEIYTKVNEKVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNF
        EISHDSAMGLVTKVLGMGVLLTE        VYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDR LR+WALEETAENMHRNF
Subjt:  EISHDSAMGLVTKVLGMGVLLTEIYTKVNEKVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNF

Query:  GSGYPGAYYNQVFIAQDPTTKCWLEDHKHSVFGFPTLVRFSWGTCSSYFKDVVEVALAFITLKPIFQNPVPHGYAESDKVDEGGATSGSGKKQLRLRNVG
        GSGYPG          DPTTKCWLEDHKHSVFGFPTLVRFSWGTC+SYFKD+VEV+                   ESDKVDE GAT GSGKKQLRL NVG
Subjt:  GSGYPGAYYNQVFIAQDPTTKCWLEDHKHSVFGFPTLVRFSWGTCSSYFKDVVEVALAFITLKPIFQNPVPHGYAESDKVDEGGATSGSGKKQLRLRNVG

Query:  ITTSKRKSEEIESNGKGRCKFFQARKLEQLTHF
        ITTSKRKSEEIESN KGRCKFFQARKLEQLT F
Subjt:  ITTSKRKSEEIESNGKGRCKFFQARKLEQLTHF

XP_022955431.1 ribonuclease H2 subunit A [Cucurbita moschata]7.1e-15084.38Show/hide
Query:  MSSQYPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN
        MSSQ PLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYC  SYLKELSSLNFADSK LKEEKREELFE LK NESIGWAVDVIDPRELSSKMLNKVKINLN
Subjt:  MSSQYPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHDSAMGLVTKVLGMGVLLTEIYTKVNEKVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNF
        EISHDSAMGLVTKVLGMGVLLTE        VYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDR LR+WALEETAENMHRNF
Subjt:  EISHDSAMGLVTKVLGMGVLLTEIYTKVNEKVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNF

Query:  GSGYPGAYYNQVFIAQDPTTKCWLEDHKHSVFGFPTLVRFSWGTCSSYFKDVVEVALAFITLKPIFQNPVPHGYAESDKVDEGGATSGSGKKQLRLRNVG
        GSGYPG          DPTTKCWLEDHKHSVFGFPTLVRFSWGTC+SYFKD+VEV+                   ESDKVDE GAT GSGKKQLRL NVG
Subjt:  GSGYPGAYYNQVFIAQDPTTKCWLEDHKHSVFGFPTLVRFSWGTCSSYFKDVVEVALAFITLKPIFQNPVPHGYAESDKVDEGGATSGSGKKQLRLRNVG

Query:  ITTSKRKSEEIESNGKGRCKFFQARKLEQLTHF
        ITTSKRKSEEIESN KGRCKFFQARKLEQLTHF
Subjt:  ITTSKRKSEEIESNGKGRCKFFQARKLEQLTHF

XP_022979887.1 ribonuclease H2 subunit A [Cucurbita maxima]4.1e-15084.38Show/hide
Query:  MSSQYPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN
        MSSQ PLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYC  SYLKELSSLNFADSKTLKEEKREELFE LKANESIGWAVDVIDPRELSSKMLNKVKINLN
Subjt:  MSSQYPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHDSAMGLVTKVLGMGVLLTEIYTKVNEKVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNF
        EISHDSAMGLVTKVLGMGVLLTE        VYVDTVGDPEKYRIKLSEKFPNVKFVV+KKADSLYPVVSGASIVAKVTRDR LR+WALEETAENMHRNF
Subjt:  EISHDSAMGLVTKVLGMGVLLTEIYTKVNEKVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNF

Query:  GSGYPGAYYNQVFIAQDPTTKCWLEDHKHSVFGFPTLVRFSWGTCSSYFKDVVEVALAFITLKPIFQNPVPHGYAESDKVDEGGATSGSGKKQLRLRNVG
        GSGYPG          DPTTKCWLEDHKHSVFGFP+LVRFSWGTC+SYFKD+VEV+                   ESDKVDE GAT GSGKKQLRL NVG
Subjt:  GSGYPGAYYNQVFIAQDPTTKCWLEDHKHSVFGFPTLVRFSWGTCSSYFKDVVEVALAFITLKPIFQNPVPHGYAESDKVDEGGATSGSGKKQLRLRNVG

Query:  ITTSKRKSEEIESNGKGRCKFFQARKLEQLTHF
        ITTSKRKSEEIESN KGRCKFFQARKLEQLTHF
Subjt:  ITTSKRKSEEIESNGKGRCKFFQARKLEQLTHF

XP_023527419.1 ribonuclease H2 subunit A [Cucurbita pepo subsp. pepo]6.4e-15184.98Show/hide
Query:  MSSQYPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN
        MSSQ PLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYC  SYLKELSSLNFADSKTLKEEKREELFE LKANESIGWAVDVIDPRELSSKMLNKVKINLN
Subjt:  MSSQYPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHDSAMGLVTKVLGMGVLLTEIYTKVNEKVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNF
        EISHDSAMGLVTKVLGMGVLLTE        VYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDR LR+WALEETAENMHRNF
Subjt:  EISHDSAMGLVTKVLGMGVLLTEIYTKVNEKVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNF

Query:  GSGYPGAYYNQVFIAQDPTTKCWLEDHKHSVFGFPTLVRFSWGTCSSYFKDVVEVALAFITLKPIFQNPVPHGYAESDKVDEGGATSGSGKKQLRLRNVG
        GSGYPG          DPTTKCWLEDHKHSVFGFPTLVRFSWGTC+SYFKD+VEV+                   ESDKVDE GAT GSGKKQLRL NVG
Subjt:  GSGYPGAYYNQVFIAQDPTTKCWLEDHKHSVFGFPTLVRFSWGTCSSYFKDVVEVALAFITLKPIFQNPVPHGYAESDKVDEGGATSGSGKKQLRLRNVG

Query:  ITTSKRKSEEIESNGKGRCKFFQARKLEQLTHF
        ITTSKRKSEEIESN KGRCKFFQARKLEQLTHF
Subjt:  ITTSKRKSEEIESNGKGRCKFFQARKLEQLTHF

XP_038902264.1 ribonuclease H2 subunit A [Benincasa hispida]1.5e-15285.29Show/hide
Query:  MSSQYPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN
        MSSQYP+PKWASKPCVMGIDEAGRGPVLGPMVYGCLYCA+SYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN
Subjt:  MSSQYPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHDSAMGLVTKVLGMGVLLTEIYTKVNEKVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNF
        EISHDSAMGLVTKVLG+GVLLTE        VYVDTVGDPEKYRIKLSEKFP+VKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNF
Subjt:  EISHDSAMGLVTKVLGMGVLLTEIYTKVNEKVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNF

Query:  GSGYPGAYYNQVFIAQDPTTKCWLEDHKHSVFGFPTLVRFSWGTCSSYFKDVVEVALAFITLKPIFQNPVPHGYAESDKVDEGGATSGSGKKQLRLRNVG
        GSGYPG          DPTTKCWLEDHKHSVFGFPTLVRFSWGTC+SYFKD+VEV+                   ESDKVDE GAT+GSGKKQLRL +VG
Subjt:  GSGYPGAYYNQVFIAQDPTTKCWLEDHKHSVFGFPTLVRFSWGTCSSYFKDVVEVALAFITLKPIFQNPVPHGYAESDKVDEGGATSGSGKKQLRLRNVG

Query:  ITTSKRKSEEIESNGKGRCKFFQARKLEQLTHF
        ITTSKRKSEEIESN KGRCKFFQARKLEQLTHF
Subjt:  ITTSKRKSEEIESNGKGRCKFFQARKLEQLTHF

TrEMBL top hitse value%identityAlignment
A0A0A0KTZ4 Ribonuclease7.6e-15084.38Show/hide
Query:  MSSQYPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN
        MSSQ  LPKW SKPCVMGIDEAGRGPVLGPMVYGCLYCA+SYLK+LSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN
Subjt:  MSSQYPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHDSAMGLVTKVLGMGVLLTEIYTKVNEKVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNF
        EISHDSAMGLVTKVL MGVLLTE        VYVDTVGDPEKYRIKLSEKFPN+KFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNF
Subjt:  EISHDSAMGLVTKVLGMGVLLTEIYTKVNEKVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNF

Query:  GSGYPGAYYNQVFIAQDPTTKCWLEDHKHSVFGFPTLVRFSWGTCSSYFKDVVEVALAFITLKPIFQNPVPHGYAESDKVDEGGATSGSGKKQLRLRNVG
        GSGYPG          DPTTKCWLEDHKHSVFGFPTLVRFSWGTC+SYFKDVVEV+                   ESDKVDE GAT GSGKKQLRL NVG
Subjt:  GSGYPGAYYNQVFIAQDPTTKCWLEDHKHSVFGFPTLVRFSWGTCSSYFKDVVEVALAFITLKPIFQNPVPHGYAESDKVDEGGATSGSGKKQLRLRNVG

Query:  ITTSKRKSEEIESNGKGRCKFFQARKLEQLTHF
        ITTSKRKSEEIES+GKGRCKFFQARKLEQL+ F
Subjt:  ITTSKRKSEEIESNGKGRCKFFQARKLEQLTHF

A0A1S3BXP1 Ribonuclease4.9e-14984.38Show/hide
Query:  MSSQYPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN
        MS Q  LPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCA+SYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN
Subjt:  MSSQYPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHDSAMGLVTKVLGMGVLLTEIYTKVNEKVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNF
        EISH SAMGLVTKVL MGVLLTE        VYVDTVGDPEKYRIKLSEKFPN+KFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNF
Subjt:  EISHDSAMGLVTKVLGMGVLLTEIYTKVNEKVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNF

Query:  GSGYPGAYYNQVFIAQDPTTKCWLEDHKHSVFGFPTLVRFSWGTCSSYFKDVVEVALAFITLKPIFQNPVPHGYAESDKVDEGGATSGSGKKQLRLRNVG
        GSGYPG          DPTTKCWLEDHKHSVFGFPTLVRFSWGTC+SYFKDVVEV+                   ESDKVDE GAT GSGKKQLRL NVG
Subjt:  GSGYPGAYYNQVFIAQDPTTKCWLEDHKHSVFGFPTLVRFSWGTCSSYFKDVVEVALAFITLKPIFQNPVPHGYAESDKVDEGGATSGSGKKQLRLRNVG

Query:  ITTSKRKSEEIESNGKGRCKFFQARKLEQLTHF
        ITTSKRKSEEIESN KGRCKFFQARKLEQL+ F
Subjt:  ITTSKRKSEEIESNGKGRCKFFQARKLEQLTHF

A0A5A7TT92 Ribonuclease4.9e-14984.38Show/hide
Query:  MSSQYPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN
        MS Q  LPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCA+SYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN
Subjt:  MSSQYPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHDSAMGLVTKVLGMGVLLTEIYTKVNEKVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNF
        EISH SAMGLVTKVL MGVLLTE        VYVDTVGDPEKYRIKLSEKFPN+KFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNF
Subjt:  EISHDSAMGLVTKVLGMGVLLTEIYTKVNEKVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNF

Query:  GSGYPGAYYNQVFIAQDPTTKCWLEDHKHSVFGFPTLVRFSWGTCSSYFKDVVEVALAFITLKPIFQNPVPHGYAESDKVDEGGATSGSGKKQLRLRNVG
        GSGYPG          DPTTKCWLEDHKHSVFGFPTLVRFSWGTC+SYFKDVVEV+                   ESDKVDE GAT GSGKKQLRL NVG
Subjt:  GSGYPGAYYNQVFIAQDPTTKCWLEDHKHSVFGFPTLVRFSWGTCSSYFKDVVEVALAFITLKPIFQNPVPHGYAESDKVDEGGATSGSGKKQLRLRNVG

Query:  ITTSKRKSEEIESNGKGRCKFFQARKLEQLTHF
        ITTSKRKSEEIESN KGRCKFFQARKLEQL+ F
Subjt:  ITTSKRKSEEIESNGKGRCKFFQARKLEQLTHF

A0A6J1GTR5 Ribonuclease3.4e-15084.38Show/hide
Query:  MSSQYPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN
        MSSQ PLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYC  SYLKELSSLNFADSK LKEEKREELFE LK NESIGWAVDVIDPRELSSKMLNKVKINLN
Subjt:  MSSQYPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHDSAMGLVTKVLGMGVLLTEIYTKVNEKVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNF
        EISHDSAMGLVTKVLGMGVLLTE        VYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDR LR+WALEETAENMHRNF
Subjt:  EISHDSAMGLVTKVLGMGVLLTEIYTKVNEKVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNF

Query:  GSGYPGAYYNQVFIAQDPTTKCWLEDHKHSVFGFPTLVRFSWGTCSSYFKDVVEVALAFITLKPIFQNPVPHGYAESDKVDEGGATSGSGKKQLRLRNVG
        GSGYPG          DPTTKCWLEDHKHSVFGFPTLVRFSWGTC+SYFKD+VEV+                   ESDKVDE GAT GSGKKQLRL NVG
Subjt:  GSGYPGAYYNQVFIAQDPTTKCWLEDHKHSVFGFPTLVRFSWGTCSSYFKDVVEVALAFITLKPIFQNPVPHGYAESDKVDEGGATSGSGKKQLRLRNVG

Query:  ITTSKRKSEEIESNGKGRCKFFQARKLEQLTHF
        ITTSKRKSEEIESN KGRCKFFQARKLEQLTHF
Subjt:  ITTSKRKSEEIESNGKGRCKFFQARKLEQLTHF

A0A6J1IPY0 Ribonuclease2.0e-15084.38Show/hide
Query:  MSSQYPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN
        MSSQ PLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYC  SYLKELSSLNFADSKTLKEEKREELFE LKANESIGWAVDVIDPRELSSKMLNKVKINLN
Subjt:  MSSQYPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHDSAMGLVTKVLGMGVLLTEIYTKVNEKVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNF
        EISHDSAMGLVTKVLGMGVLLTE        VYVDTVGDPEKYRIKLSEKFPNVKFVV+KKADSLYPVVSGASIVAKVTRDR LR+WALEETAENMHRNF
Subjt:  EISHDSAMGLVTKVLGMGVLLTEIYTKVNEKVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNF

Query:  GSGYPGAYYNQVFIAQDPTTKCWLEDHKHSVFGFPTLVRFSWGTCSSYFKDVVEVALAFITLKPIFQNPVPHGYAESDKVDEGGATSGSGKKQLRLRNVG
        GSGYPG          DPTTKCWLEDHKHSVFGFP+LVRFSWGTC+SYFKD+VEV+                   ESDKVDE GAT GSGKKQLRL NVG
Subjt:  GSGYPGAYYNQVFIAQDPTTKCWLEDHKHSVFGFPTLVRFSWGTCSSYFKDVVEVALAFITLKPIFQNPVPHGYAESDKVDEGGATSGSGKKQLRLRNVG

Query:  ITTSKRKSEEIESNGKGRCKFFQARKLEQLTHF
        ITTSKRKSEEIESN KGRCKFFQARKLEQLTHF
Subjt:  ITTSKRKSEEIESNGKGRCKFFQARKLEQLTHF

SwissProt top hitse value%identityAlignment
O75792 Ribonuclease H2 subunit A1.9e-6047.2Show/hide
Query:  PLPKWASK-PCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISH
        P+P    K PCV+G+DEAGRGPVLGPMVY   YC    L +L +L  ADSKTL E +RE LF  ++  + +GWA+DV+ P  +S+ ML +VK NLN +SH
Subjt:  PLPKWASK-PCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISH

Query:  DSAMGLVTKVLGMGVLLTEIYTKVNEKVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGY
        D+A GL+   L  GV +T+        V+VDTVG PE Y+ +L + FP ++  V  KAD+LYPVVS ASI AKV RD+A+++W   E  +++  ++GSGY
Subjt:  DSAMGLVTKVLGMGVLLTEIYTKVNEKVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGY

Query:  PGAYYNQVFIAQDPTTKCWLEDHKHSVFGFPTLVRFSWGTCSSYFKDVVE
        P           DP TK WL++H   VFGFP  VRFSW T  +  +   E
Subjt:  PGAYYNQVFIAQDPTTKCWLEDHKHSVFGFPTLVRFSWGTCSSYFKDVVE

Q2TBT5 Ribonuclease H2 subunit A3.5e-5947.06Show/hide
Query:  MSSQYPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFADSKTLKEEKREELFEDLKAN-ESIGWAVDVIDPRELSSKMLNKVKINL
        +SS  P P    +PCV+G+DEAGRGPVLGPMVY   YC  S L++L +L  ADSKTL E +R+ LF  ++ + + +GWA+DV+ P  +S+ ML +VK NL
Subjt:  MSSQYPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFADSKTLKEEKREELFEDLKAN-ESIGWAVDVIDPRELSSKMLNKVKINL

Query:  NEISHDSAMGLVTKVLGMGVLLTEIYTKVNEKVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRN
        N +SHD+A GLV   L  GV + +        V+VDTVG PE Y+ +L ++FP ++  V  KAD+LYPVVS ASI AKV RD+A++ W   E  +++  +
Subjt:  NEISHDSAMGLVTKVLGMGVLLTEIYTKVNEKVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRN

Query:  FGSGYPGAYYNQVFIAQDPTTKCWLEDHKHSVFGFPTLVRFSWGTCSSYFKDVVE
        +GSGYP           DP TK WL  H   VFGFP  VRFSW T  S  +   E
Subjt:  FGSGYPGAYYNQVFIAQDPTTKCWLEDHKHSVFGFPTLVRFSWGTCSSYFKDVVE

Q5U209 Ribonuclease H2 subunit A3.5e-5946.22Show/hide
Query:  PLPKWASK-PCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFADSKTLKEEKREELFEDLKAN-ESIGWAVDVIDPRELSSKMLNKVKINLNEIS
        P+P    K PCV+G+DEAGRGPVLGPMVY   YC  S L +L +L  ADSKTL E +RE LF  ++ + + +GWA+D++ P  +S+ ML +VK NLN +S
Subjt:  PLPKWASK-PCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFADSKTLKEEKREELFEDLKAN-ESIGWAVDVIDPRELSSKMLNKVKINLNEIS

Query:  HDSAMGLVTKVLGMGVLLTEIYTKVNEKVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSG
        HD+A GL+   +   V +T+        V+VDTVG PE Y+ +L ++FP ++  V  KADSL+PVVS ASI+AKV RD+A++ W   E+ + +  ++GSG
Subjt:  HDSAMGLVTKVLGMGVLLTEIYTKVNEKVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSG

Query:  YPGAYYNQVFIAQDPTTKCWLEDHKHSVFGFPTLVRFSWGTCSSYFKDVVE
        YP           DP TK WL  H   VFGFP  VRFSW T  +  +   E
Subjt:  YPGAYYNQVFIAQDPTTKCWLEDHKHSVFGFPTLVRFSWGTCSSYFKDVVE

Q9CWY8 Ribonuclease H2 subunit A1.0e-5847.01Show/hide
Query:  PLPKWASK-PCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFADSKTLKEEKREELFEDLKAN-ESIGWAVDVIDPRELSSKMLNKVKINLNEIS
        P+P    K PCV+G+DEAGRGPVLGPMVY   YC  S L +L +L  ADSKTL E +RE LF  ++ + + +GWA+DV+ P  +S+ ML +VK NLN +S
Subjt:  PLPKWASK-PCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFADSKTLKEEKREELFEDLKAN-ESIGWAVDVIDPRELSSKMLNKVKINLNEIS

Query:  HDSAMGLVTKVLGMGVLLTEIYTKVNEKVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSG
        HD+A GL+   L   V +T+        V+VDTVG PE Y+ +L + FP ++  V  KADSL+PVVS ASI AKV RD+A++ W   E  +++  ++GSG
Subjt:  HDSAMGLVTKVLGMGVLLTEIYTKVNEKVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSG

Query:  YPGAYYNQVFIAQDPTTKCWLEDHKHSVFGFPTLVRFSWGTCSSYFKDVVE
        YP           DP TK WL  H   VFGFP  VRFSW T  +  +   E
Subjt:  YPGAYYNQVFIAQDPTTKCWLEDHKHSVFGFPTLVRFSWGTCSSYFKDVVE

Q9SEZ6 Ribonuclease H2 subunit A3.8e-11463.36Show/hide
Query:  MSSQYPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN
        M S+   P+WAS+PC+MGIDEAGRGPVLGPMVYGC+YC  SY   L+SL+FADSKTLKEEKREEL+E LK ++S+GWAVDVIDPRELS+KML K K NLN
Subjt:  MSSQYPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHDSAMGLVTKVLGMGVLLTEIYTKVNEKVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNF
        EISH+SAMGL+ +VL MGVLLTE         Y+DTVGDP+KYRIKLSE+FP++KFVV+KKADSL+P+VSGASIVAKVTRDRAL+EW +EET E+++RNF
Subjt:  EISHDSAMGLVTKVLGMGVLLTEIYTKVNEKVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNF

Query:  GSGYPGAYYNQVFIAQDPTTKCWLEDHKHSVFGFPTLVRFSWGTCSSYFKDVVEVALAFITLKPIFQNPVPHGYAESDKVDEGGATSGSGKKQLRLRNVG
        GSGYPG          DP TK WL  HKHSVFGFP+LVRFSWGTC+++ K  VEVA                   E+D+ +E G    S K+Q +L + G
Subjt:  GSGYPGAYYNQVFIAQDPTTKCWLEDHKHSVFGFPTLVRFSWGTCSSYFKDVVEVALAFITLKPIFQNPVPHGYAESDKVDEGGATSGSGKKQLRLRNVG

Query:  ITTSKRKSEEIESNGKGRCKFFQARKLEQLTHF
          T +++SEEIES+GKGRCKF QARK++QLT F
Subjt:  ITTSKRKSEEIESNGKGRCKFFQARKLEQLTHF

Arabidopsis top hitse value%identityAlignment
AT2G25100.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.7e-11563.36Show/hide
Query:  MSSQYPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN
        M S+   P+WAS+PC+MGIDEAGRGPVLGPMVYGC+YC  SY   L+SL+FADSKTLKEEKREEL+E LK ++S+GWAVDVIDPRELS+KML K K NLN
Subjt:  MSSQYPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHDSAMGLVTKVLGMGVLLTEIYTKVNEKVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNF
        EISH+SAMGL+ +VL MGVLLTE         Y+DTVGDP+KYRIKLSE+FP++KFVV+KKADSL+P+VSGASIVAKVTRDRAL+EW +EET E+++RNF
Subjt:  EISHDSAMGLVTKVLGMGVLLTEIYTKVNEKVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNF

Query:  GSGYPGAYYNQVFIAQDPTTKCWLEDHKHSVFGFPTLVRFSWGTCSSYFKDVVEVALAFITLKPIFQNPVPHGYAESDKVDEGGATSGSGKKQLRLRNVG
        GSGYPG          DP TK WL  HKHSVFGFP+LVRFSWGTC+++ K  VEVA                   E+D+ +E G    S K+Q +L + G
Subjt:  GSGYPGAYYNQVFIAQDPTTKCWLEDHKHSVFGFPTLVRFSWGTCSSYFKDVVEVALAFITLKPIFQNPVPHGYAESDKVDEGGATSGSGKKQLRLRNVG

Query:  ITTSKRKSEEIESNGKGRCKFFQARKLEQLTHF
          T +++SEEIES+GKGRCKF QARK++QLT F
Subjt:  ITTSKRKSEEIESNGKGRCKFFQARKLEQLTHF

AT2G25100.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.6e-10459.46Show/hide
Query:  MSSQYPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN
        M S+   P+WAS+PC+MGIDEAGRGPVLGPMVYGC+YC  SY   L+SL+FADSKTLKEEKREEL+E LK ++S+GWAVDVIDPRELS+KML        
Subjt:  MSSQYPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHDSAMGLVTKVLGMGVLLTEIYTKVNEKVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNF
                    KVL MGVLLTE         Y+DTVGDP+KYRIKLSE+FP++KFVV+KKADSL+P+VSGASIVAKVTRDRAL+EW +EET E+++RNF
Subjt:  EISHDSAMGLVTKVLGMGVLLTEIYTKVNEKVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNF

Query:  GSGYPGAYYNQVFIAQDPTTKCWLEDHKHSVFGFPTLVRFSWGTCSSYFKDVVEVALAFITLKPIFQNPVPHGYAESDKVDEGGATSGSGKKQLRLRNVG
        GSGYPG          DP TK WL  HKHSVFGFP+LVRFSWGTC+++ K  VEVA                   E+D+ +E G    S K+Q +L + G
Subjt:  GSGYPGAYYNQVFIAQDPTTKCWLEDHKHSVFGFPTLVRFSWGTCSSYFKDVVEVALAFITLKPIFQNPVPHGYAESDKVDEGGATSGSGKKQLRLRNVG

Query:  ITTSKRKSEEIESNGKGRCKFFQARKLEQLTHF
          T +++SEEIES+GKGRCKF QARK++QLT F
Subjt:  ITTSKRKSEEIESNGKGRCKFFQARKLEQLTHF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGAAGCTACGAAAACAATCAGAACAAAAGCAGCTTCCATGGCGGGAACGACCTAAAAGAAGAGAACACACAATCGAAGAAACGCTCAAGTAAAGAGAGCAAGAGAGATTT
TCTTAAATCAGCAATGTCTTCGCAATATCCACTCCCAAAATGGGCTTCCAAGCCTTGTGTAATGGGCATCGATGAAGCTGGTCGAGGCCCTGTTTTAGGGCCAATGGTGT
ATGGATGCTTGTACTGCGCTACTTCCTATTTGAAAGAACTTTCGTCTTTGAATTTTGCAGACTCAAAAACTTTGAAAGAAGAGAAGAGGGAGGAATTGTTTGAAGATTTG
AAGGCTAACGAGTCAATTGGCTGGGCTGTTGATGTCATAGATCCTCGAGAACTTTCATCCAAAATGCTGAACAAAGTAAAGATAAACCTAAATGAAATATCACATGACTC
TGCAATGGGTCTGGTCACCAAGGTTCTAGGCATGGGAGTTCTTTTAACTGAGATCTACACCAAAGTCAACGAGAAGGTTTATGTGGATACTGTTGGAGATCCTGAAAAGT
ACAGAATTAAGTTGTCTGAAAAATTTCCCAATGTAAAATTTGTAGTTGCAAAGAAAGCTGATAGTTTATATCCCGTTGTCAGTGGGGCAAGCATAGTCGCAAAGGTCACA
AGAGATCGTGCATTGCGGGAATGGGCATTGGAGGAAACAGCTGAAAACATGCATAGAAACTTTGGTTCTGGATACCCTGGAGCATACTATAATCAGGTTTTCATTGCACA
GGATCCAACAACTAAATGTTGGCTAGAAGATCACAAGCACTCGGTGTTTGGGTTCCCCACATTAGTCCGCTTCAGTTGGGGTACCTGCAGTTCATATTTCAAAGACGTTG
TTGAAGTGGCCCTGGCATTCATAACATTGAAACCTATCTTTCAAAATCCTGTGCCACATGGTTACGCGGAGTCGGATAAAGTGGATGAAGGTGGGGCAACGTCTGGAAGT
GGTAAGAAACAATTAAGACTAAGGAATGTTGGTATCACCACATCCAAGAGAAAGAGTGAAGAAATTGAATCAAATGGCAAAGGACGATGCAAGTTTTTCCAGGCTAGAAA
ACTTGAACAACTCACTCATTTT
mRNA sequenceShow/hide mRNA sequence
GGAAGCTACGAAAACAATCAGAACAAAAGCAGCTTCCATGGCGGGAACGACCTAAAAGAAGAGAACACACAATCGAAGAAACGCTCAAGTAAAGAGAGCAAGAGAGATTT
TCTTAAATCAGCAATGTCTTCGCAATATCCACTCCCAAAATGGGCTTCCAAGCCTTGTGTAATGGGCATCGATGAAGCTGGTCGAGGCCCTGTTTTAGGGCCAATGGTGT
ATGGATGCTTGTACTGCGCTACTTCCTATTTGAAAGAACTTTCGTCTTTGAATTTTGCAGACTCAAAAACTTTGAAAGAAGAGAAGAGGGAGGAATTGTTTGAAGATTTG
AAGGCTAACGAGTCAATTGGCTGGGCTGTTGATGTCATAGATCCTCGAGAACTTTCATCCAAAATGCTGAACAAAGTAAAGATAAACCTAAATGAAATATCACATGACTC
TGCAATGGGTCTGGTCACCAAGGTTCTAGGCATGGGAGTTCTTTTAACTGAGATCTACACCAAAGTCAACGAGAAGGTTTATGTGGATACTGTTGGAGATCCTGAAAAGT
ACAGAATTAAGTTGTCTGAAAAATTTCCCAATGTAAAATTTGTAGTTGCAAAGAAAGCTGATAGTTTATATCCCGTTGTCAGTGGGGCAAGCATAGTCGCAAAGGTCACA
AGAGATCGTGCATTGCGGGAATGGGCATTGGAGGAAACAGCTGAAAACATGCATAGAAACTTTGGTTCTGGATACCCTGGAGCATACTATAATCAGGTTTTCATTGCACA
GGATCCAACAACTAAATGTTGGCTAGAAGATCACAAGCACTCGGTGTTTGGGTTCCCCACATTAGTCCGCTTCAGTTGGGGTACCTGCAGTTCATATTTCAAAGACGTTG
TTGAAGTGGCCCTGGCATTCATAACATTGAAACCTATCTTTCAAAATCCTGTGCCACATGGTTACGCGGAGTCGGATAAAGTGGATGAAGGTGGGGCAACGTCTGGAAGT
GGTAAGAAACAATTAAGACTAAGGAATGTTGGTATCACCACATCCAAGAGAAAGAGTGAAGAAATTGAATCAAATGGCAAAGGACGATGCAAGTTTTTCCAGGCTAGAAA
ACTTGAACAACTCACTCATTTT
Protein sequenceShow/hide protein sequence
GSYENNQNKSSFHGGNDLKEENTQSKKRSSKESKRDFLKSAMSSQYPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLKELSSLNFADSKTLKEEKREELFEDL
KANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVLLTEIYTKVNEKVYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVT
RDRALREWALEETAENMHRNFGSGYPGAYYNQVFIAQDPTTKCWLEDHKHSVFGFPTLVRFSWGTCSSYFKDVVEVALAFITLKPIFQNPVPHGYAESDKVDEGGATSGS
GKKQLRLRNVGITTSKRKSEEIESNGKGRCKFFQARKLEQLTHF