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Lsi07G000920 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G000920
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr07:1043352..1044120
RNA-Seq ExpressionLsi07G000920
SyntenyLsi07G000920
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600181.1 hypothetical protein SDJN03_05414, partial [Cucurbita argyrosperma subsp. sororia]3.3e-1658.82Show/hide
Query:  MASKRVPVIWSMVFFIIMILMSYNNNYNVSARKFLDVNIPLEDGFKLQMGESFSLFDKLEGELQKRLEDFLKTTTSNDIPRGGNY
        MAS  V V W  VFFI M+LM+     NVS+RK LD NIP+EDGF +++G S S F +LEGEL+KR E F+K+ T ND+PRGGNY
Subjt:  MASKRVPVIWSMVFFIIMILMSYNNNYNVSARKFLDVNIPLEDGFKLQMGESFSLFDKLEGELQKRLEDFLKTTTSNDIPRGGNY

KGN53134.1 hypothetical protein Csa_015383 [Cucumis sativus]9.7e-2472.94Show/hide
Query:  MASKRVPVIWSMVFFIIMILMSYNNNYNVSARKFLDVNIPLEDGFKLQMGESFSLFDKLEGELQKRLEDFLKTTTSNDIPRGGNY
        MASKRV +I ++VFFIIM+L+S NNNYNVSARKFLDVN PL+D F LQM  S SLF K++GELQ+R ED LK TT NDIPRGGNY
Subjt:  MASKRVPVIWSMVFFIIMILMSYNNNYNVSARKFLDVNIPLEDGFKLQMGESFSLFDKLEGELQKRLEDFLKTTTSNDIPRGGNY

KGN53135.1 hypothetical protein Csa_014652 [Cucumis sativus]2.4e-2273.26Show/hide
Query:  MASKRVPVIWSMVFFIIMILMSYNNNYNVSARKFLDVNIP-LEDGFKLQMGESFSLFDKLEGELQKRLEDFLKTTTSNDIPRGGNY
        MAS RV +I  ++FFIIM+ +S NNNYN SARKFLDVN P L+D F LQMG S SLF KLEGELQKR ED LKTTT NDIPRGGNY
Subjt:  MASKRVPVIWSMVFFIIMILMSYNNNYNVSARKFLDVNIP-LEDGFKLQMGESFSLFDKLEGELQKRLEDFLKTTTSNDIPRGGNY

XP_031739611.1 uncharacterized protein LOC116403190 isoform X2 [Cucumis sativus]4.2e-1170.37Show/hide
Query:  RKFLDVNIPLEDGFKLQMGESFSLFDKLEGELQKRLEDFLKTTTSNDIPRGGNY
        +KFLDVN PL+D F LQM  S SLF K++GELQ+R ED LK TT NDIPRGGNY
Subjt:  RKFLDVNIPLEDGFKLQMGESFSLFDKLEGELQKRLEDFLKTTTSNDIPRGGNY

TrEMBL top hitse value%identityAlignment
A0A0A0KU24 Uncharacterized protein1.2e-2273.26Show/hide
Query:  MASKRVPVIWSMVFFIIMILMSYNNNYNVSARKFLDVNIP-LEDGFKLQMGESFSLFDKLEGELQKRLEDFLKTTTSNDIPRGGNY
        MAS RV +I  ++FFIIM+ +S NNNYN SARKFLDVN P L+D F LQMG S SLF KLEGELQKR ED LKTTT NDIPRGGNY
Subjt:  MASKRVPVIWSMVFFIIMILMSYNNNYNVSARKFLDVNIP-LEDGFKLQMGESFSLFDKLEGELQKRLEDFLKTTTSNDIPRGGNY

A0A0A0KW84 Uncharacterized protein4.7e-2472.94Show/hide
Query:  MASKRVPVIWSMVFFIIMILMSYNNNYNVSARKFLDVNIPLEDGFKLQMGESFSLFDKLEGELQKRLEDFLKTTTSNDIPRGGNY
        MASKRV +I ++VFFIIM+L+S NNNYNVSARKFLDVN PL+D F LQM  S SLF K++GELQ+R ED LK TT NDIPRGGNY
Subjt:  MASKRVPVIWSMVFFIIMILMSYNNNYNVSARKFLDVNIPLEDGFKLQMGESFSLFDKLEGELQKRLEDFLKTTTSNDIPRGGNY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTCTCTCTCTTTTTTGCTTCTGAAATGGCTTCCAAGAGAGTTCCAGTGATTTGGAGTATGGTGTTCTTCATTATTATGATTTTAATGTCCTATAATAATAATTATAATGT
TTCTGCAAGGAAATTTCTTGATGTTAATATCCCTCTTGAGGATGGCTTCAAGCTTCAAATGGGTGAATCATTTTCATTGTTCGATAAATTGGAGGGGGAACTACAAAAGA
GATTGGAGGATTTCTTAAAAACAACCACTAGTAATGATATTCCTCGAGGTGGAAACTACTAA
mRNA sequenceShow/hide mRNA sequence
CTCTCTCTCTTTTTTGCTTCTGAAATGGCTTCCAAGAGAGTTCCAGTGATTTGGAGTATGGTGTTCTTCATTATTATGATTTTAATGTCCTATAATAATAATTATAATGT
TTCTGCAAGGAAATTTCTTGATGTTAATATCCCTCTTGAGGATGGCTTCAAGCTTCAAATGGGTGAATCATTTTCATTGTTCGATAAATTGGAGGGGGAACTACAAAAGA
GATTGGAGGATTTCTTAAAAACAACCACTAGTAATGATATTCCTCGAGGTGGAAACTACTAA
Protein sequenceShow/hide protein sequence
LSLFFASEMASKRVPVIWSMVFFIIMILMSYNNNYNVSARKFLDVNIPLEDGFKLQMGESFSLFDKLEGELQKRLEDFLKTTTSNDIPRGGNY