; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi07G000930 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G000930
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr07:1050919..1052177
RNA-Seq ExpressionLsi07G000930
SyntenyLsi07G000930
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600181.1 hypothetical protein SDJN03_05414, partial [Cucurbita argyrosperma subsp. sororia]2.3e-1449.51Show/hide
Query:  MASKRVSVHWSIVFFIVMILMSSNNNYNVFARKFLDVNIPLEDGFNFDLQMGESSSILCESLISFSIFNILVSVHKLEGELQKRFDDFLKTTTGNDIPRG
        MAS  VSV W  VFFI M+LM+S    NV +RK LD NIP+EDGFN  +++G SS                   ++LEGEL+KRF+ F+K+ T ND+PRG
Subjt:  MASKRVSVHWSIVFFIVMILMSSNNNYNVFARKFLDVNIPLEDGFNFDLQMGESSSILCESLISFSIFNILVSVHKLEGELQKRFDDFLKTTTGNDIPRG

Query:  GNY
        GNY
Subjt:  GNY

KGN53134.1 hypothetical protein Csa_015383 [Cucumis sativus]2.1e-2058.25Show/hide
Query:  MASKRVSVHWSIVFFIVMILMSSNNNYNVFARKFLDVNIPLEDGFNFDLQMGESSSILCESLISFSIFNILVSVHKLEGELQKRFDDFLKTTTGNDIPRG
        MASKRVS+  ++VFFI+M+L+SSNNNYNV ARKFLDVN PL+D FN  LQM  SS                   +K++GELQ+RF+D LK TT NDIPRG
Subjt:  MASKRVSVHWSIVFFIVMILMSSNNNYNVFARKFLDVNIPLEDGFNFDLQMGESSSILCESLISFSIFNILVSVHKLEGELQKRFDDFLKTTTGNDIPRG

Query:  GNY
        GNY
Subjt:  GNY

KGN53135.1 hypothetical protein Csa_014652 [Cucumis sativus]1.1e-1959.22Show/hide
Query:  MASKRVSVHWSIVFFIVMILMSSNNNYNVFARKFLDVNIPLEDGFNFDLQMGESSSILCESLISFSIFNILVSVHKLEGELQKRFDDFLKTTTGNDIPRG
        MAS RVS+   ++FFI+M+ +SSNNNYN  ARKFLDVN PL D   FDLQMG SS                   +KLEGELQKRF+D LKTTT NDIPRG
Subjt:  MASKRVSVHWSIVFFIVMILMSSNNNYNVFARKFLDVNIPLEDGFNFDLQMGESSSILCESLISFSIFNILVSVHKLEGELQKRFDDFLKTTTGNDIPRG

Query:  GNY
        GNY
Subjt:  GNY

XP_031739611.1 uncharacterized protein LOC116403190 isoform X2 [Cucumis sativus]5.4e-0851.39Show/hide
Query:  RKFLDVNIPLEDGFNFDLQMGESSSILCESLISFSIFNILVSVHKLEGELQKRFDDFLKTTTGNDIPRGGNY
        +KFLDVN PL+D FN  LQM  SS                   +K++GELQ+RF+D LK TT NDIPRGGNY
Subjt:  RKFLDVNIPLEDGFNFDLQMGESSSILCESLISFSIFNILVSVHKLEGELQKRFDDFLKTTTGNDIPRGGNY

TrEMBL top hitse value%identityAlignment
A0A0A0KU24 Uncharacterized protein5.1e-2059.22Show/hide
Query:  MASKRVSVHWSIVFFIVMILMSSNNNYNVFARKFLDVNIPLEDGFNFDLQMGESSSILCESLISFSIFNILVSVHKLEGELQKRFDDFLKTTTGNDIPRG
        MAS RVS+   ++FFI+M+ +SSNNNYN  ARKFLDVN PL D   FDLQMG SS                   +KLEGELQKRF+D LKTTT NDIPRG
Subjt:  MASKRVSVHWSIVFFIVMILMSSNNNYNVFARKFLDVNIPLEDGFNFDLQMGESSSILCESLISFSIFNILVSVHKLEGELQKRFDDFLKTTTGNDIPRG

Query:  GNY
        GNY
Subjt:  GNY

A0A0A0KW84 Uncharacterized protein1.0e-2058.25Show/hide
Query:  MASKRVSVHWSIVFFIVMILMSSNNNYNVFARKFLDVNIPLEDGFNFDLQMGESSSILCESLISFSIFNILVSVHKLEGELQKRFDDFLKTTTGNDIPRG
        MASKRVS+  ++VFFI+M+L+SSNNNYNV ARKFLDVN PL+D FN  LQM  SS                   +K++GELQ+RF+D LK TT NDIPRG
Subjt:  MASKRVSVHWSIVFFIVMILMSSNNNYNVFARKFLDVNIPLEDGFNFDLQMGESSSILCESLISFSIFNILVSVHKLEGELQKRFDDFLKTTTGNDIPRG

Query:  GNY
        GNY
Subjt:  GNY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTCTCTCTCTCCCTCTCCCTCTCTCTTTTTGCGTCTGAAATGGCTTCCAAGAGAGTTTCAGTGCATTGGAGTATAGTGTTCTTCATTGTTATGATTTTAATGTCCTCTAA
TAATAATTATAATGTTTTTGCAAGAAAATTTCTTGATGTTAATATCCCTCTTGAGGATGGCTTCAACTTCGACCTGCAAATGGGCGAATCATCTTCAATATTATGTGAGT
CTCTAATTTCTTTCTCCATCTTTAATATTTTAGTTTCCGTTCATAAATTGGAGGGGGAACTACAAAAGCGATTCGATGATTTCTTAAAAACAACCACTGGTAATGATATT
CCTCGGGGTGGAAACTACTAA
mRNA sequenceShow/hide mRNA sequence
CTCTCTCTCTCCCTCTCCCTCTCTCTTTTTGCGTCTGAAATGGCTTCCAAGAGAGTTTCAGTGCATTGGAGTATAGTGTTCTTCATTGTTATGATTTTAATGTCCTCTAA
TAATAATTATAATGTTTTTGCAAGAAAATTTCTTGATGTTAATATCCCTCTTGAGGATGGCTTCAACTTCGACCTGCAAATGGGCGAATCATCTTCAATATTATGTGAGT
CTCTAATTTCTTTCTCCATCTTTAATATTTTAGTTTCCGTTCATAAATTGGAGGGGGAACTACAAAAGCGATTCGATGATTTCTTAAAAACAACCACTGGTAATGATATT
CCTCGGGGTGGAAACTACTAAATGGAAACACAAAAATAAATTTATAATAGCAATTTTCAGTAGTATATCTATGTACTATTTACCACTTCCAGTTTAATTTTGTATGTGAA
ATTGAATCACAATAATGAAATAAGTTATCCTACTTCCATAA
Protein sequenceShow/hide protein sequence
LSLSLSLSLFASEMASKRVSVHWSIVFFIVMILMSSNNNYNVFARKFLDVNIPLEDGFNFDLQMGESSSILCESLISFSIFNILVSVHKLEGELQKRFDDFLKTTTGNDI
PRGGNY