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Lsi07G001180 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G001180
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionubiquitin carboxyl-terminal hydrolase 12-like isoform X2
Genome locationchr07:1340415..1345563
RNA-Seq ExpressionLsi07G001180
SyntenyLsi07G001180
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600198.1 Ubiquitin carboxyl-terminal hydrolase 12, partial [Cucurbita argyrosperma subsp. sororia]2.9e-0669.23Show/hide
Query:  ITKSTRVDPPPHYAFQINSYSVLSELEMKKCESGDFEVD
        IT++ RV+PP +Y FQINSYS LSE+ MKKCESG+F VD
Subjt:  ITKSTRVDPPPHYAFQINSYSVLSELEMKKCESGDFEVD

KAG7030860.1 Ubiquitin carboxyl-terminal hydrolase 12 [Cucurbita argyrosperma subsp. argyrosperma]1.9e-1326.59Show/hide
Query:  ITKSTRVDPPPHYAFQINSYSVLSELEMKKCESGDFEVD---------------------------AKDDLPLGWEVRRV--------------------
        IT++ RV+PP +Y FQINSYS LSE+ MKKCESG+F VD                           +KD+LPLGWE  ++                    
Subjt:  ITKSTRVDPPPHYAFQINSYSVLSELEMKKCESGDFEVD---------------------------AKDDLPLGWEVRRV--------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --FLCCIVT------LDFADEHWFKNTTYGSGMHEFLPRKDISP-HLQNDVLYLKARIVAMSTVTEF
          F   +        +D ++EHWF NTTYG G HEFL R D+ P HLQNDV YLKARI AMS V +F
Subjt:  --FLCCIVT------LDFADEHWFKNTTYGSGMHEFLPRKDISP-HLQNDVLYLKARIVAMSTVTEF

XP_008453868.1 PREDICTED: uncharacterized protein LOC103494460 isoform X1 [Cucumis melo]2.1e-1251.76Show/hide
Query:  EIITKSTRVDPPPHYAFQINSYSVLSELEMKKCESGDFEVDA-----------------------------KDDLPLGWEVRRVF
        EI  KS RVDPP HYAFQI+SYSVLSE+EMKKCESGDFEVD                               ++LPLGWEVR +F
Subjt:  EIITKSTRVDPPPHYAFQINSYSVLSELEMKKCESGDFEVDA-----------------------------KDDLPLGWEVRRVF

XP_008453868.1 PREDICTED: uncharacterized protein LOC103494460 isoform X1 [Cucumis melo]1.2e-1046.91Show/hide
Query:  EVDAKDDLPLGWEVRRVFLCCIVT------LDFADEHWFKNTTYGSGMHEFLPRKDISPHLQNDVLYLKARIVAMSTVTEF
        ++D  + +PLG ++   FL  +        +D + EHWFK   +G G  EFL R++IS H QND  YLKARIVAMSTV EF
Subjt:  EVDAKDDLPLGWEVRRVFLCCIVT------LDFADEHWFKNTTYGSGMHEFLPRKDISPHLQNDVLYLKARIVAMSTVTEF

XP_008453868.1 PREDICTED: uncharacterized protein LOC103494460 isoform X1 [Cucumis melo]3.6e-1247.56Show/hide
Query:  EVDAKDDLPLGWEVRRVFLCCIVT------LDFADEHWFKNTTYGSGMHEFLPRKDISP-HLQNDVLYLKARIVAMSTVTEF
        ++D+ + +P G ++   F   +        +D ++EHWF NTTYG G HEFL R D+ P HLQNDV YLKARI AMS V +F
Subjt:  EVDAKDDLPLGWEVRRVFLCCIVT------LDFADEHWFKNTTYGSGMHEFLPRKDISP-HLQNDVLYLKARIVAMSTVTEF

XP_008453869.1 PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like isoform X2 [Cucumis melo]3.0e-1933.49Show/hide
Query:  EIITKSTRVDPPPHYAFQINSYSVLSELEMKKCESGDFEVDA----------------------------------------------------------
        EI  KS RVDPP HYAFQI+SYSVLSE+EMKKCESGDFEVD                                                           
Subjt:  EIITKSTRVDPPPHYAFQINSYSVLSELEMKKCESGDFEVDA----------------------------------------------------------

Query:  --------------------------------------KDDLPLGWEVRRVFLCCIVT------LDFADEHWFKNTTYGSGMHEFLPRKDISPHLQNDVL
                                               + +PLG ++   FL  +        +D + EHWFK   +G G  EFL R++IS H QND  
Subjt:  --------------------------------------KDDLPLGWEVRRVFLCCIVT------LDFADEHWFKNTTYGSGMHEFLPRKDISPHLQNDVL

Query:  YLKARIVAMSTVTEF
        YLKARIVAMSTV EF
Subjt:  YLKARIVAMSTVTEF

XP_038902857.1 MATH domain and coiled-coil domain-containing protein At3g58400-like [Benincasa hispida]8.2e-1728.14Show/hide
Query:  EIITKSTRVDPPPHYAFQINSYSVLSELEMKKCESGDFEVD---------------------------AKDDLPLGWEVRRVFLCCIVT-----------
        EIIT+S RVDPP HYAF+I+SYSV SE+EMKKCESGDFEVD                           AKD+LPLGWEVR +F   I             
Subjt:  EIITKSTRVDPPPHYAFQINSYSVLSELEMKKCESGDFEVD---------------------------AKDDLPLGWEVRRVFLCCIVT-----------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --------------------------------------------LDFADEHWFKNTTYGSGMHEFLPRKDISPHLQNDVLYLKARIVAMSTVTEF
                                                    +D + E WF  T+ G+G HEFL RKD+SPHLQNDVLYLKARIVAMS V EF
Subjt:  --------------------------------------------LDFADEHWFKNTTYGSGMHEFLPRKDISPHLQNDVLYLKARIVAMSTVTEF

TrEMBL top hitse value%identityAlignment
A0A0A0KUE1 Uncharacterized protein3.3e-1145.68Show/hide
Query:  EVDAKDDLPLGWEVRRVFLCCIVT------LDFADEHWFKNTTYGSGMHEFLPRKDISPHLQNDVLYLKARIVAMSTVTEF
        ++D+ + +PLG ++   F+  +        +D + EHW+K   +G+G  EFL RK+IS H QND  YLKARIVAMSTV EF
Subjt:  EVDAKDDLPLGWEVRRVFLCCIVT------LDFADEHWFKNTTYGSGMHEFLPRKDISPHLQNDVLYLKARIVAMSTVTEF

A0A0A0KUE1 Uncharacterized protein6.6e-1246.34Show/hide
Query:  EVDAKDDLPLGWEVRRVFLCCIVT------LDFADEHWFKNTTYGSGMHEFLPRKDISP-HLQNDVLYLKARIVAMSTVTEF
        ++D+ + +P G ++   F   +        +D ++E+WF NT YG G HEFL R D+ P HLQNDV YLKARIVAMS V +F
Subjt:  EVDAKDDLPLGWEVRRVFLCCIVT------LDFADEHWFKNTTYGSGMHEFLPRKDISP-HLQNDVLYLKARIVAMSTVTEF

A0A1S3BWR3 ubiquitin carboxyl-terminal hydrolase 12-like isoform X21.5e-1933.49Show/hide
Query:  EIITKSTRVDPPPHYAFQINSYSVLSELEMKKCESGDFEVDA----------------------------------------------------------
        EI  KS RVDPP HYAFQI+SYSVLSE+EMKKCESGDFEVD                                                           
Subjt:  EIITKSTRVDPPPHYAFQINSYSVLSELEMKKCESGDFEVDA----------------------------------------------------------

Query:  --------------------------------------KDDLPLGWEVRRVFLCCIVT------LDFADEHWFKNTTYGSGMHEFLPRKDISPHLQNDVL
                                               + +PLG ++   FL  +        +D + EHWFK   +G G  EFL R++IS H QND  
Subjt:  --------------------------------------KDDLPLGWEVRRVFLCCIVT------LDFADEHWFKNTTYGSGMHEFLPRKDISPHLQNDVL

Query:  YLKARIVAMSTVTEF
        YLKARIVAMSTV EF
Subjt:  YLKARIVAMSTVTEF

A0A1S3BYG6 uncharacterized protein LOC103494460 isoform X15.6e-1146.91Show/hide
Query:  EVDAKDDLPLGWEVRRVFLCCIVT------LDFADEHWFKNTTYGSGMHEFLPRKDISPHLQNDVLYLKARIVAMSTVTEF
        ++D  + +PLG ++   FL  +        +D + EHWFK   +G G  EFL R++IS H QND  YLKARIVAMSTV EF
Subjt:  EVDAKDDLPLGWEVRRVFLCCIVT------LDFADEHWFKNTTYGSGMHEFLPRKDISPHLQNDVLYLKARIVAMSTVTEF

A0A1S3BYG6 uncharacterized protein LOC103494460 isoform X15.0e-1250Show/hide
Query:  EIITKSTRVDPPPHYAFQINSYSVLSELEMKKCESGDFEVDA----------------------------KDDLPLGWEVRRVF
        EI  KS RVDPP HYAFQI+SYSVLS++EMKKCESGDFEVD                              ++LPLGWE+R +F
Subjt:  EIITKSTRVDPPPHYAFQINSYSVLSELEMKKCESGDFEVDA----------------------------KDDLPLGWEVRRVF

A0A5A7TNH7 Ubiquitin carboxyl-terminal hydrolase 12-like isoform X21.0e-1251.76Show/hide
Query:  EIITKSTRVDPPPHYAFQINSYSVLSELEMKKCESGDFEVDA-----------------------------KDDLPLGWEVRRVF
        EI  KS RVDPP HYAFQI+SYSVLSE+EMKKCESGDFEVD                               ++LPLGWEVR +F
Subjt:  EIITKSTRVDPPPHYAFQINSYSVLSELEMKKCESGDFEVDA-----------------------------KDDLPLGWEVRRVF

A0A5A7TNH7 Ubiquitin carboxyl-terminal hydrolase 12-like isoform X25.6e-1146.91Show/hide
Query:  EVDAKDDLPLGWEVRRVFLCCIVT------LDFADEHWFKNTTYGSGMHEFLPRKDISPHLQNDVLYLKARIVAMSTVTEF
        ++D  + +PLG ++   FL  +        +D + EHWFK   +G G  EFL R++IS H QND  YLKARIVAMSTV EF
Subjt:  EVDAKDDLPLGWEVRRVFLCCIVT------LDFADEHWFKNTTYGSGMHEFLPRKDISPHLQNDVLYLKARIVAMSTVTEF

A0A5A7TNH7 Ubiquitin carboxyl-terminal hydrolase 12-like isoform X21.0e-1251.76Show/hide
Query:  EIITKSTRVDPPPHYAFQINSYSVLSELEMKKCESGDFEVDA-----------------------------KDDLPLGWEVRRVF
        EI  KS RVDPP HYAFQI+SYSVLSE+EMKKCESGDFEVD                               ++LPLGWEVR +F
Subjt:  EIITKSTRVDPPPHYAFQINSYSVLSELEMKKCESGDFEVDA-----------------------------KDDLPLGWEVRRVF

A0A6J1JFK1 uncharacterized protein LOC1114864292.2e-0774.36Show/hide
Query:  ITKSTRVDPPPHYAFQINSYSVLSELEMKKCESGDFEVD
        IT++TRVDPP +Y FQINSYS LSE+ MKKCESG F VD
Subjt:  ITKSTRVDPPPHYAFQINSYSVLSELEMKKCESGDFEVD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAATTATTACAAAATCAACAAGGGTTGATCCACCACCTCATTATGCATTCCAAATTAATTCTTACTCCGTACTTTCAGAATTAGAGATGAAGAAATGTGAATCAGG
AGACTTTGAAGTTGATGCTAAAGATGATCTTCCTCTTGGATGGGAAGTGAGGAGGGTGTTTTTATGTTGTATTGTGACATTGGATTTTGCAGATGAACATTGGTTTAAAA
ACACAACTTATGGCAGTGGCATGCATGAGTTCTTGCCTCGAAAAGACATCAGTCCTCATTTGCAAAATGATGTTTTGTATCTCAAAGCTAGAATTGTGGCTATGTCAACC
GTGACAGAATTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAATTATTACAAAATCAACAAGGGTTGATCCACCACCTCATTATGCATTCCAAATTAATTCTTACTCCGTACTTTCAGAATTAGAGATGAAGAAATGTGAATCAGG
AGACTTTGAAGTTGATGCTAAAGATGATCTTCCTCTTGGATGGGAAGTGAGGAGGGTGTTTTTATGTTGTATTGTGACATTGGATTTTGCAGATGAACATTGGTTTAAAA
ACACAACTTATGGCAGTGGCATGCATGAGTTCTTGCCTCGAAAAGACATCAGTCCTCATTTGCAAAATGATGTTTTGTATCTCAAAGCTAGAATTGTGGCTATGTCAACC
GTGACAGAATTTTAA
Protein sequenceShow/hide protein sequence
MEIITKSTRVDPPPHYAFQINSYSVLSELEMKKCESGDFEVDAKDDLPLGWEVRRVFLCCIVTLDFADEHWFKNTTYGSGMHEFLPRKDISPHLQNDVLYLKARIVAMST
VTEF