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Lsi07G001430 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G001430
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionlate embryogenesis abundant protein At5g17165-like
Genome locationchr07:1539247..1546346
RNA-Seq ExpressionLsi07G001430
SyntenyLsi07G001430
Gene Ontology termsNA
InterPro domainsIPR039291 - Late embryogenesis abundant protein At5g17165-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576842.1 Late embryogenesis abundant protein, partial [Cucurbita argyrosperma subsp. sororia]3.2e-4167.88Show/hide
Query:  MAANSRSAGAIAGLGKRITDQIWTSDPLRNSVISSSAPKFRH--------PNVETRVKSNLFFSDDLAGSYLISPPQAADKYWAPHPKTGVFGPATDNPA
        MAANSRSAGAIAGL KRITDQIW  DPLRNS ISS+APKFR          N + +V+ ++   D       +  PQ+ADKYWAPHP+TGVFGPAT NP 
Subjt:  MAANSRSAGAIAGLGKRITDQIWTSDPLRNSVISSSAPKFRH--------PNVETRVKSNLFFSDDLAGSYLISPPQAADKYWAPHPKTGVFGPATDNPA

Query:  AAVANRAADGGNYSAVEEEKAWFRPTSLEDSEKPHGF
        AAVAN  A+GGNYS VEEEKAWFRPTSLEDSEKPHGF
Subjt:  AAVANRAADGGNYSAVEEEKAWFRPTSLEDSEKPHGF

XP_004146886.1 late embryogenesis abundant protein At5g17165 [Cucumis sativus]8.9e-4472.46Show/hide
Query:  MAANSRSAGAIAGLGKRITDQIWTSDPLRNSVISSSAPKFRH--------PNVETRVKSNLFFSDDLAGSYLISPPQAADKYWAPHPKTGVFGPATDNPA
        MAANSRS GAIAGLGKRITDQIWT DPLRNSVISSSAPKFR          N E +V+ ++   D      +I P  AAD YWAPHP+TGVFGPA+DNPA
Subjt:  MAANSRSAGAIAGLGKRITDQIWTSDPLRNSVISSSAPKFRH--------PNVETRVKSNLFFSDDLAGSYLISPPQAADKYWAPHPKTGVFGPATDNPA

Query:  --AAVANRAADGGNYSAVEEEKAWFRPTSLEDSEKPHG
          AA ANRAADGGNYSAVEEEKAWFRPTSLEDSEKPHG
Subjt:  --AAVANRAADGGNYSAVEEEKAWFRPTSLEDSEKPHG

XP_008453829.1 PREDICTED: uncharacterized protein LOC103494437 [Cucumis melo]3.2e-4171.74Show/hide
Query:  MAANSRSAGAIAGLGKRITDQIWT-SDPLRNSVISSSAPKFRH--------PNVETRVKSNLFFSDDLAGSYLISPPQAADKYWAPHPKTGVFGPATDNP
        MAANSRSAGAIAGLGKRITDQIWT SD LRNSVISSSAPKFR          N E +V+ ++   D       +  PQAADKYWAPHP+TGVFGP +DNP
Subjt:  MAANSRSAGAIAGLGKRITDQIWT-SDPLRNSVISSSAPKFRH--------PNVETRVKSNLFFSDDLAGSYLISPPQAADKYWAPHPKTGVFGPATDNP

Query:  AA-AVANRAADGGNYSAVEEEKAWFRPTSLEDSEKPHG
        AA A ANRAAD GNYSA EEEKAWFRPTSLEDSEKPHG
Subjt:  AA-AVANRAADGGNYSAVEEEKAWFRPTSLEDSEKPHG

XP_022984594.1 late embryogenesis abundant protein At5g17165-like [Cucurbita maxima]2.9e-4269.34Show/hide
Query:  MAANSRSAGAIAGLGKRITDQIWTSDPLRNSVISSSAPKFRH--------PNVETRVKSNLFFSDDLAGSYLISPPQAADKYWAPHPKTGVFGPATDNPA
        MAANSRSAGAIAGL KRITDQIWT DPLRNS ISS+APKFR          N + +V+ ++   D       +  PQ+ADKYWAPHP+TGVFGPAT NP 
Subjt:  MAANSRSAGAIAGLGKRITDQIWTSDPLRNSVISSSAPKFRH--------PNVETRVKSNLFFSDDLAGSYLISPPQAADKYWAPHPKTGVFGPATDNPA

Query:  AAVANRAADGGNYSAVEEEKAWFRPTSLEDSEKPHGF
        AAVAN  ADGGNYS VEEEKAWFRPTSLEDSEKPHGF
Subjt:  AAVANRAADGGNYSAVEEEKAWFRPTSLEDSEKPHGF

XP_038901450.1 late embryogenesis abundant protein At5g17165-like [Benincasa hispida]1.1e-4474.26Show/hide
Query:  MAANSRSAGAIAGLGKRITDQIWTSDPLRNSVISSSAPKFRH--------PNVETRVKSNLFFSDDLAGSYLISPPQAADKYWAPHPKTGVFGPATDNPA
        MAANSRSAG IAGLGKRITDQIWTSDPLRNSVISSSAPK R          N + +V+ ++   DD+  S      QAADKYWAPHP+TGVFGPA+DNPA
Subjt:  MAANSRSAGAIAGLGKRITDQIWTSDPLRNSVISSSAPKFRH--------PNVETRVKSNLFFSDDLAGSYLISPPQAADKYWAPHPKTGVFGPATDNPA

Query:  AAVANRAADGGNYSAVEEEKAWFRPTSLEDSEKPHG
        AA ANRAADGGNYSAVEEEKAWFRPTSLEDSEKPHG
Subjt:  AAVANRAADGGNYSAVEEEKAWFRPTSLEDSEKPHG

TrEMBL top hitse value%identityAlignment
A0A1S3BYE5 uncharacterized protein LOC1034944371.5e-4171.74Show/hide
Query:  MAANSRSAGAIAGLGKRITDQIWT-SDPLRNSVISSSAPKFRH--------PNVETRVKSNLFFSDDLAGSYLISPPQAADKYWAPHPKTGVFGPATDNP
        MAANSRSAGAIAGLGKRITDQIWT SD LRNSVISSSAPKFR          N E +V+ ++   D       +  PQAADKYWAPHP+TGVFGP +DNP
Subjt:  MAANSRSAGAIAGLGKRITDQIWT-SDPLRNSVISSSAPKFRH--------PNVETRVKSNLFFSDDLAGSYLISPPQAADKYWAPHPKTGVFGPATDNP

Query:  AA-AVANRAADGGNYSAVEEEKAWFRPTSLEDSEKPHG
        AA A ANRAAD GNYSA EEEKAWFRPTSLEDSEKPHG
Subjt:  AA-AVANRAADGGNYSAVEEEKAWFRPTSLEDSEKPHG

A0A6J1CHE9 late embryogenesis abundant protein At5g17165-like1.1e-3668.94Show/hide
Query:  MAANSRSAGAIAGLGKRITDQIWTSDPLRNSVISSSAPKFRHPNVETRVKSNLFFSDDLAGSYLIS----PPQAADKYWAPHPKTGVFGPATDNPAAAVA
        MAANSRSAGAIAGLGKRIT+QIWTSDPLRNS ISSSAPKFR     +    N    D+ A   ++      PQ  DKYWAPHP+TGVFGP TD+P AA A
Subjt:  MAANSRSAGAIAGLGKRITDQIWTSDPLRNSVISSSAPKFRHPNVETRVKSNLFFSDDLAGSYLIS----PPQAADKYWAPHPKTGVFGPATDNPAAAVA

Query:  NRAADGGNYSAVEEEKAWFRPTSLEDSEKPHG
         +AA+GG+Y AVEEEKAWFRPTSLEDSEKPHG
Subjt:  NRAADGGNYSAVEEEKAWFRPTSLEDSEKPHG

A0A6J1E3E9 late embryogenesis abundant protein At5g17165-like1.0e-4067.15Show/hide
Query:  MAANSRSAGAIAGLGKRITDQIWTSDPLRNSVISSSAPKFRH--------PNVETRVKSNLFFSDDLAGSYLISPPQAADKYWAPHPKTGVFGPATDNPA
        MAANSRSAGAIAGL KRITDQIW  DPLRNS ISS+APKFR          N + +V+ ++   D       +  PQ+ADKYWAP+P+TGVFGPAT NP 
Subjt:  MAANSRSAGAIAGLGKRITDQIWTSDPLRNSVISSSAPKFRH--------PNVETRVKSNLFFSDDLAGSYLISPPQAADKYWAPHPKTGVFGPATDNPA

Query:  AAVANRAADGGNYSAVEEEKAWFRPTSLEDSEKPHGF
        AAVAN  A+GGNYS VEEEKAWFRPTSLEDSEKPHGF
Subjt:  AAVANRAADGGNYSAVEEEKAWFRPTSLEDSEKPHGF

A0A6J1FT47 late embryogenesis abundant protein At5g17165-like isoform X24.3e-3663.97Show/hide
Query:  MAANSRSAGAIAGLGKRITDQIWTSDPLRNSVISSSAPKFR-------HPNVETRVKSNLFFSDDLAGSYLISPPQAADKYWAPHPKTGVFGPATDNPAA
        MAANSRSAGAIAGLGKRIT+QIWTSD    S ISSSA KFR         N + +V+ ++   D       +  PQAA+KYWAPHP TGVFGP  D P A
Subjt:  MAANSRSAGAIAGLGKRITDQIWTSDPLRNSVISSSAPKFR-------HPNVETRVKSNLFFSDDLAGSYLISPPQAADKYWAPHPKTGVFGPATDNPAA

Query:  AVANRAADGGNYSAVEEEKAWFRPTSLEDSEKPHGF
        A  +RAADGGN++A EEEKAWFRPTSLEDSEKPHGF
Subjt:  AVANRAADGGNYSAVEEEKAWFRPTSLEDSEKPHGF

A0A6J1JAZ8 late embryogenesis abundant protein At5g17165-like1.4e-4269.34Show/hide
Query:  MAANSRSAGAIAGLGKRITDQIWTSDPLRNSVISSSAPKFRH--------PNVETRVKSNLFFSDDLAGSYLISPPQAADKYWAPHPKTGVFGPATDNPA
        MAANSRSAGAIAGL KRITDQIWT DPLRNS ISS+APKFR          N + +V+ ++   D       +  PQ+ADKYWAPHP+TGVFGPAT NP 
Subjt:  MAANSRSAGAIAGLGKRITDQIWTSDPLRNSVISSSAPKFRH--------PNVETRVKSNLFFSDDLAGSYLISPPQAADKYWAPHPKTGVFGPATDNPA

Query:  AAVANRAADGGNYSAVEEEKAWFRPTSLEDSEKPHGF
        AAVAN  ADGGNYS VEEEKAWFRPTSLEDSEKPHGF
Subjt:  AAVANRAADGGNYSAVEEEKAWFRPTSLEDSEKPHGF

SwissProt top hitse value%identityAlignment
F4KFM8 Late embryogenesis abundant protein At5g171656.1e-1157.89Show/hide
Query:  ADKYWAPHPKTGVFGPATDNPAAAVANRAADGGNYSAVEEEKAWFRPTSLEDSEKPH
        +DKYW+PHP+TGVFGP++ +  A    R   GG   +V EEKAWFRPTSLED +K H
Subjt:  ADKYWAPHPKTGVFGPATDNPAAAVANRAADGGNYSAVEEEKAWFRPTSLEDSEKPH

Arabidopsis top hitse value%identityAlignment
AT3G03150.1 unknown protein1.5e-1259.65Show/hide
Query:  ADKYWAPHPKTGVFGPATDNPAAAVANRAADGGNYSAVEEEKAWFRPTSLEDSEKPH
        +DKYW+PHPKTGVFGP+T   +A       D    +AV EE AWFRPTSLEDS+K H
Subjt:  ADKYWAPHPKTGVFGPATDNPAAAVANRAADGGNYSAVEEEKAWFRPTSLEDSEKPH

AT5G17165.1 unknown protein4.3e-1257.89Show/hide
Query:  ADKYWAPHPKTGVFGPATDNPAAAVANRAADGGNYSAVEEEKAWFRPTSLEDSEKPH
        +DKYW+PHP+TGVFGP++ +  A    R   GG   +V EEKAWFRPTSLED +K H
Subjt:  ADKYWAPHPKTGVFGPATDNPAAAVANRAADGGNYSAVEEEKAWFRPTSLEDSEKPH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCTAATTCGAGGAGCGCAGGAGCGATCGCCGGCTTGGGGAAACGAATCACTGACCAGATCTGGACCAGCGATCCACTTCGCAACTCTGTGATATCTTCCTCTGC
TCCGAAGTTCAGACATCCCAACGTGGAAACACGTGTAAAATCAAATTTGTTTTTTTCCGATGACCTAGCTGGCTCTTATCTTATTTCTCCCCCTCAAGCTGCTGATAAAT
ACTGGGCTCCTCATCCAAAAACCGGAGTTTTTGGGCCGGCCACCGACAATCCTGCTGCAGCGGTGGCCAACCGTGCAGCAGATGGTGGCAACTACTCTGCTGTGGAGGAG
GAAAAGGCTTGGTTCCGACCAACCAGTCTTGAGGATTCCGAGAAGCCCCACGGGTTCTAG
mRNA sequenceShow/hide mRNA sequence
ACGGAGAAGACAATTTGCGTTGCGAATGGGAAAGGTTTTTGAGTTTTGTCGCCTTTTGGCTGGGATGTAATCCGACGCCGTATTATCGCACTATAAATAAGGATTTACCG
CTAACGATTAGAATCAAAAGCAATTAATCGCCGTTGTCTTCTACTTCTTCTTCATCTTTCTCTCTCTGTGCTTTGGCGCAGTTTTTCTGGTTCTTCGTTTTTCTCCCTCT
CTTTCTTTAAGCCTGAATTGTATGGCCGCTAATTCGAGGAGCGCAGGAGCGATCGCCGGCTTGGGGAAACGAATCACTGACCAGATCTGGACCAGCGATCCACTTCGCAA
CTCTGTGATATCTTCCTCTGCTCCGAAGTTCAGACATCCCAACGTGGAAACACGTGTAAAATCAAATTTGTTTTTTTCCGATGACCTAGCTGGCTCTTATCTTATTTCTC
CCCCTCAAGCTGCTGATAAATACTGGGCTCCTCATCCAAAAACCGGAGTTTTTGGGCCGGCCACCGACAATCCTGCTGCAGCGGTGGCCAACCGTGCAGCAGATGGTGGC
AACTACTCTGCTGTGGAGGAGGAAAAGGCTTGGTTCCGACCAACCAGTCTTGAGGATTCCGAGAAGCCCCACGGGTTCTAG
Protein sequenceShow/hide protein sequence
MAANSRSAGAIAGLGKRITDQIWTSDPLRNSVISSSAPKFRHPNVETRVKSNLFFSDDLAGSYLISPPQAADKYWAPHPKTGVFGPATDNPAAAVANRAADGGNYSAVEE
EKAWFRPTSLEDSEKPHGF