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Lsi07G002010 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G002010
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionLate embryogenesis abundant protein
Genome locationchr07:2166231..2167087
RNA-Seq ExpressionLsi07G002010
SyntenyLsi07G002010
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3440795.1 hypothetical protein FNV43_RR19081 [Rhamnella rubrinervis]1.6e-1772.15Show/hide
Query:  QKKQEEKAGDVMSHSFGEGYATRSDEEGFGGVYNHQNQSFPKTHGNQIIQDANQPGYDKSQGSEVKEKEQARNQSNASA
        +KK  EK GDVMSHSFGEGYATRSDEEGFGGVY   NQS  KT  +Q+I + N P YDK+QGSEVKEKE+ARNQ N SA
Subjt:  QKKQEEKAGDVMSHSFGEGYATRSDEEGFGGVYNHQNQSFPKTHGNQIIQDANQPGYDKSQGSEVKEKEQARNQSNASA

TKY70380.1 plant/MUD21-2 protein [Spatholobus suberectus]4.6e-1767.86Show/hide
Query:  MEKCQKKQEEKA-GDVMSHSFGEGYATRSDEEGFGGVYNHQNQSFPKTHGNQIIQDANQPGYDKSQGSEVKEKEQARNQSNASA
        M+K QK  EE A GDVMSHSFGEGYATRSDEEGFGG+Y   NQS PKT         N P YDK+QGSEVKEKE+AR+Q+NA+A
Subjt:  MEKCQKKQEEKA-GDVMSHSFGEGYATRSDEEGFGGVYNHQNQSFPKTHGNQIIQDANQPGYDKSQGSEVKEKEQARNQSNASA

XP_015889917.1 uncharacterized protein LOC107424585 [Ziziphus jujuba]1.2e-1774.32Show/hide
Query:  QKKQEEKAGDVMSHSFGEGYATRSDEEGFGGVYNHQNQSFPKTHGNQIIQDANQPGYDKSQGSEVKEKEQARNQ
        +KK  EK GDVMSHSFGEGYATRSDEEGFGGVY   NQS PKT  +Q+I + N P YDK+QGSEVKEKE+ARNQ
Subjt:  QKKQEEKAGDVMSHSFGEGYATRSDEEGFGGVYNHQNQSFPKTHGNQIIQDANQPGYDKSQGSEVKEKEQARNQ

XP_022136799.1 uncharacterized protein LOC111008409 [Momordica charantia]4.3e-2374.7Show/hide
Query:  MEKCQKKQEEKAGDVMSHSFGEGYATRSDEEGFGGVYNHQNQSFPKTHGNQIIQDANQPGYDKSQGSEVKEKEQARNQSNASA
        MEK  +   EK+GDVMSHSFGEGYATRSDEEGFGGVY+ QNQSF  T G++I QD NQPGYDKSQGSEVKEKE+AR+Q+NA +
Subjt:  MEKCQKKQEEKAGDVMSHSFGEGYATRSDEEGFGGVYNHQNQSFPKTHGNQIIQDANQPGYDKSQGSEVKEKEQARNQSNASA

XP_034225880.1 uncharacterized protein LOC117635652 [Prunus dulcis]6.0e-1763.86Show/hide
Query:  MEKCQKKQEEKAGDVMSHSFGEGYATRSDEEGFGGVYNHQNQSFPKTHGNQIIQDANQPGYDKSQGSEVKEKEQARNQSNASA
        M+K Q   ++K GD MSHSFGEGYATRSDEEGFGGV++  NQS PKT  +Q+I + N P YDK+QGSEVKEKE+ R+Q++A+A
Subjt:  MEKCQKKQEEKAGDVMSHSFGEGYATRSDEEGFGGVYNHQNQSFPKTHGNQIIQDANQPGYDKSQGSEVKEKEQARNQSNASA

TrEMBL top hitse value%identityAlignment
A0A314YVV4 Uncharacterized protein2.9e-1763.86Show/hide
Query:  MEKCQKKQEEKAGDVMSHSFGEGYATRSDEEGFGGVYNHQNQSFPKTHGNQIIQDANQPGYDKSQGSEVKEKEQARNQSNASA
        M+K Q   ++K GD MSHSFGEGYATRSDEEGFGGV++  NQS PKT  +Q+I + N P YDK+QGSEVKEKE+ R+Q+ A+A
Subjt:  MEKCQKKQEEKAGDVMSHSFGEGYATRSDEEGFGGVYNHQNQSFPKTHGNQIIQDANQPGYDKSQGSEVKEKEQARNQSNASA

A0A5E4E1S5 PREDICTED: LOC110634367 isoform2.9e-1763.86Show/hide
Query:  MEKCQKKQEEKAGDVMSHSFGEGYATRSDEEGFGGVYNHQNQSFPKTHGNQIIQDANQPGYDKSQGSEVKEKEQARNQSNASA
        M+K Q   ++K GD MSHSFGEGYATRSDEEGFGGV++  NQS PKT  +Q+I + N P YDK+QGSEVKEKE+ R+Q++A+A
Subjt:  MEKCQKKQEEKAGDVMSHSFGEGYATRSDEEGFGGVYNHQNQSFPKTHGNQIIQDANQPGYDKSQGSEVKEKEQARNQSNASA

A0A6J1C5D2 uncharacterized protein LOC1110084092.1e-2374.7Show/hide
Query:  MEKCQKKQEEKAGDVMSHSFGEGYATRSDEEGFGGVYNHQNQSFPKTHGNQIIQDANQPGYDKSQGSEVKEKEQARNQSNASA
        MEK  +   EK+GDVMSHSFGEGYATRSDEEGFGGVY+ QNQSF  T G++I QD NQPGYDKSQGSEVKEKE+AR+Q+NA +
Subjt:  MEKCQKKQEEKAGDVMSHSFGEGYATRSDEEGFGGVYNHQNQSFPKTHGNQIIQDANQPGYDKSQGSEVKEKEQARNQSNASA

A0A6P4AUZ7 uncharacterized protein LOC1074245855.9e-1874.32Show/hide
Query:  QKKQEEKAGDVMSHSFGEGYATRSDEEGFGGVYNHQNQSFPKTHGNQIIQDANQPGYDKSQGSEVKEKEQARNQ
        +KK  EK GDVMSHSFGEGYATRSDEEGFGGVY   NQS PKT  +Q+I + N P YDK+QGSEVKEKE+ARNQ
Subjt:  QKKQEEKAGDVMSHSFGEGYATRSDEEGFGGVYNHQNQSFPKTHGNQIIQDANQPGYDKSQGSEVKEKEQARNQ

M5WF00 Uncharacterized protein3.8e-1763.86Show/hide
Query:  MEKCQKKQEEKAGDVMSHSFGEGYATRSDEEGFGGVYNHQNQSFPKTHGNQIIQDANQPGYDKSQGSEVKEKEQARNQSNASA
        M+K Q   ++K GD MSHSFGEGYATRSDEEGFGGV++  NQS PKT  +Q+I + N P YDK+QGSEVKEKE+ R+Q+ A+A
Subjt:  MEKCQKKQEEKAGDVMSHSFGEGYATRSDEEGFGGVYNHQNQSFPKTHGNQIIQDANQPGYDKSQGSEVKEKEQARNQSNASA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G66780.1 unknown protein1.4e-1660.49Show/hide
Query:  MEKCQKKQEEKAGDVMSHSFGEGYATRSDEEGFGGVYNHQNQSFPKTHGNQIIQDANQPGYDKSQGSEVKEKEQARNQSNA
        M+K  +   EK GDVMSHS+GEGYATRSDEEGFGG+Y   NQ+  K   N+I +  N P YDK+QGSE KEKE+ARNQ+ +
Subjt:  MEKCQKKQEEKAGDVMSHSFGEGYATRSDEEGFGGVYNHQNQSFPKTHGNQIIQDANQPGYDKSQGSEVKEKEQARNQSNA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGTGTCAGAAGAAGCAGGAGGAGAAAGCAGGAGACGTGATGTCGCATTCGTTTGGAGAAGGATATGCGACGAGATCGGATGAAGAAGGGTTCGGCGGAGTTTA
CAATCATCAGAATCAGTCATTTCCTAAAACCCATGGGAATCAGATTATTCAAGATGCCAATCAACCTGGTTATGATAAGAGTCAAGGGAGCGAAGTAAAGGAGAAGGAAC
AAGCAAGAAATCAGAGCAATGCAAGTGCTTAA
mRNA sequenceShow/hide mRNA sequence
GGCAAGAAAACAGGATCAAAAAAATGGAGGCCGATTGAAGCGGACGCCGTGGCGGAGGCAAAATATGAAAACGCTTAATTATAAAGTGGAGAAACAGGAAGAAGAGATGA
AAAGATGATCAAAGCAATCAGTTGGGCGAGAAGTCAGCGTTATTCATTGGTAAAGTATCTGCCATTATCATCTCCGGCGATCGTATCAGAATCCGGACGGTGACCACCAC
GACAAAGGGGGCGAAGAACATGGAGAAGTGTCAGAAGAAGCAGGAGGAGAAAGCAGGAGACGTGATGTCGCATTCGTTTGGAGAAGGATATGCGACGAGATCGGATGAAG
AAGGGTTCGGCGGAGTTTACAATCATCAGAATCAGTCATTTCCTAAAACCCATGGGAATCAGATTATTCAAGATGCCAATCAACCTGGTTATGATAAGAGTCAAGGGAGC
GAAGTAAAGGAGAAGGAACAAGCAAGAAATCAGAGCAATGCAAGTGCTTAACTAAGAATCAGATCACTGTTAAAACGAACGGGCAGTTCAACAATATGTTGTTTATTTTT
TTCTTCCTTTGAATGTATGAGATCTTTAATTTCTCTCCATCTCATTTCTGAGTCAATAAGATTTTTGCTCTTTCATTCACCGCAC
Protein sequenceShow/hide protein sequence
MEKCQKKQEEKAGDVMSHSFGEGYATRSDEEGFGGVYNHQNQSFPKTHGNQIIQDANQPGYDKSQGSEVKEKEQARNQSNASA