CuGenDBv2

Gene ID	Lsi07G002130
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	sigma intracellular receptor 2-like
Genome location	chr07:2282497..2284594
RNA-Seq Expression	Lsi07G002130
Synteny	Lsi07G002130
Gene Ontology terms	GO:0005789 - endoplasmic reticulum membrane (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR016964 - Sigma intracellular receptor 2 IPR033118 - EXPERA domain

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6577250.1 Sigma intracellular receptor 2, partial [Cucurbita argyrosperma subsp. sororia]

1.4e-65

81.66

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Query:  MGVLLKLFDSILLVSFLVHALAPPLIGAQLLLPQPLFPDLLIDFKNQYITQSGDYLMAEAPHFFIGLLWLELLLQWPLTLLNLYAISTAKSWLHTTCLIY
        MGVLLKLFDS+L VSF VHA+APPLI AQLLLP  LFPD+LIDFK  YI  SGDYLMAE P FF+GLLWLELLLQWPLT+ NLYAI  AKSWLHTTCLIY
Subjt:  MGVLLKLFDSILLVSFLVHALAPPLIGAQLLLPQPLFPDLLIDFKNQYITQSGDYLMAEAPHFFIGLLWLELLLQWPLTLLNLYAISTAKSWLHTTCLIY

Query:  GVSLFSAMAAIAAELIGSQRASGILLKIYLPFLGLGVFTMLRGLLPRCSKATATGHGAVAGPSIATKKK
        GVSLFSAMAAIAAELIGSQRASG+LLK+YLPFLGLGV   LRGL+PRCSKATATG     GPSIA KKK
Subjt:  GVSLFSAMAAIAAELIGSQRASGILLKIYLPFLGLGVFTMLRGLLPRCSKATATGHGAVAGPSIATKKK

XP_004149168.1 sigma intracellular receptor 2 [Cucumis sativus]

2.6e-67

82.35

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Query:  MGVLLKLFDSILLVSFLVHALAPPLIGAQLLLPQPLFPDLLIDFKNQYITQSGDYLMAEAPHFFIGLLWLELLLQWPLTLLNLYAISTAKSWLHTTCLIY
        MG +LKLFDS+L V FLVHALAPPLI AQLLLPQ LFP++ I  KN+YIT SGDYLMA+ P FF+GLLWLELLLQWPLTLLNLYAI T+KSWLHTTCLIY
Subjt:  MGVLLKLFDSILLVSFLVHALAPPLIGAQLLLPQPLFPDLLIDFKNQYITQSGDYLMAEAPHFFIGLLWLELLLQWPLTLLNLYAISTAKSWLHTTCLIY

Query:  GVSLFSAMAAIAAELIGSQRASGILLKIYLPFLGLGVFTMLRGLLPRCSKATATGHGAVAGPSIATKKKA
        GVSLFSAMAAIAAELIGSQRASGILL IY PFL +GV  MLRGLLPRC+KAT TGHG  AGPSIATKKKA
Subjt:  GVSLFSAMAAIAAELIGSQRASGILLKIYLPFLGLGVFTMLRGLLPRCSKATATGHGAVAGPSIATKKKA

XP_008453730.1 PREDICTED: transmembrane protein 97-like [Cucumis melo]

3.3e-70

87.65

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Query:  MGVLLKLFDSILLVSFLVHALAPPLIGAQLLLPQPLFPDLLIDFKNQYITQSGDYLMAEAPHFFIGLLWLELLLQWPLTLLNLYAISTAKSWLHTTCLIY
        MG  LKLF+S+L V FLVHALAPPLIGAQLLLPQ LFPD+LI FKNQYIT SGDYLMAE P FFIGLLWLELLLQWPLTLLNLYAISTAKSWLHTTCLIY
Subjt:  MGVLLKLFDSILLVSFLVHALAPPLIGAQLLLPQPLFPDLLIDFKNQYITQSGDYLMAEAPHFFIGLLWLELLLQWPLTLLNLYAISTAKSWLHTTCLIY

Query:  GVSLFSAMAAIAAELIGSQRASGILLKIYLPFLGLGVFTMLRGLLPRCSKATATGHGAVAGPSIATKKKA
        GVSLFSAMAAIAAELIGSQRASGILL IY PFL LGVF MLRGLLP C KAT TGHG  AGPSIATKKKA
Subjt:  GVSLFSAMAAIAAELIGSQRASGILLKIYLPFLGLGVFTMLRGLLPRCSKATATGHGAVAGPSIATKKKA

XP_023553153.1 sigma intracellular receptor 2-like [Cucurbita pepo subsp. pepo]

2.9e-66

82.25

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Query:  MGVLLKLFDSILLVSFLVHALAPPLIGAQLLLPQPLFPDLLIDFKNQYITQSGDYLMAEAPHFFIGLLWLELLLQWPLTLLNLYAISTAKSWLHTTCLIY
        MGVLLKLFDS+L VSF VHA+APPLIGAQLLLP  LFPD+LIDFK  YI  SGDYLMAE P FF+GLLWLELLLQWPLT+ NLYAI  AKSWLHTTCLIY
Subjt:  MGVLLKLFDSILLVSFLVHALAPPLIGAQLLLPQPLFPDLLIDFKNQYITQSGDYLMAEAPHFFIGLLWLELLLQWPLTLLNLYAISTAKSWLHTTCLIY

Query:  GVSLFSAMAAIAAELIGSQRASGILLKIYLPFLGLGVFTMLRGLLPRCSKATATGHGAVAGPSIATKKK
        GVSLFSAMAAIAAELIGSQRASG+LLK+YLPFLGLGV   LRGL+PRCSKATATG     GPSIA KKK
Subjt:  GVSLFSAMAAIAAELIGSQRASGILLKIYLPFLGLGVFTMLRGLLPRCSKATATGHGAVAGPSIATKKK

XP_038876784.1 sigma intracellular receptor 2-like [Benincasa hispida]

9.3e-73

89.41

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Query:  MGVLLKLFDSILLVSFLVHALAPPLIGAQLLLPQPLFPDLLIDFKNQYITQSGDYLMAEAPHFFIGLLWLELLLQWPLTLLNLYAISTAKSWLHTTCLIY
        MG LLKLFDSIL VSFLVHALAPPLIGAQLLLPQ LFPDLLI FKN YITQSGDYLMAEAP FFIGLLWLELLLQWPLTLLNLYAIS AK WLHTTCLIY
Subjt:  MGVLLKLFDSILLVSFLVHALAPPLIGAQLLLPQPLFPDLLIDFKNQYITQSGDYLMAEAPHFFIGLLWLELLLQWPLTLLNLYAISTAKSWLHTTCLIY

Query:  GVSLFSAMAAIAAELIGSQRASGILLKIYLPFLGLGVFTMLRGLLPRCSKATATGHGAVAGPSIATKKKA
        GVSLFSAMAAIAAEL+GSQ+ASGILL +YLPFLGLGVF  LRGL+PRCSKATA GHG  AGPSIATKKKA
Subjt:  GVSLFSAMAAIAAELIGSQRASGILLKIYLPFLGLGVFTMLRGLLPRCSKATATGHGAVAGPSIATKKKA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KZE5 EXPERA domain-containing protein

1.3e-67

82.35

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Query:  MGVLLKLFDSILLVSFLVHALAPPLIGAQLLLPQPLFPDLLIDFKNQYITQSGDYLMAEAPHFFIGLLWLELLLQWPLTLLNLYAISTAKSWLHTTCLIY
        MG +LKLFDS+L V FLVHALAPPLI AQLLLPQ LFP++ I  KN+YIT SGDYLMA+ P FF+GLLWLELLLQWPLTLLNLYAI T+KSWLHTTCLIY
Subjt:  MGVLLKLFDSILLVSFLVHALAPPLIGAQLLLPQPLFPDLLIDFKNQYITQSGDYLMAEAPHFFIGLLWLELLLQWPLTLLNLYAISTAKSWLHTTCLIY

Query:  GVSLFSAMAAIAAELIGSQRASGILLKIYLPFLGLGVFTMLRGLLPRCSKATATGHGAVAGPSIATKKKA
        GVSLFSAMAAIAAELIGSQRASGILL IY PFL +GV  MLRGLLPRC+KAT TGHG  AGPSIATKKKA
Subjt:  GVSLFSAMAAIAAELIGSQRASGILLKIYLPFLGLGVFTMLRGLLPRCSKATATGHGAVAGPSIATKKKA

A0A1S3BWY8 transmembrane protein 97-like

1.6e-70

87.65

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Query:  MGVLLKLFDSILLVSFLVHALAPPLIGAQLLLPQPLFPDLLIDFKNQYITQSGDYLMAEAPHFFIGLLWLELLLQWPLTLLNLYAISTAKSWLHTTCLIY
        MG  LKLF+S+L V FLVHALAPPLIGAQLLLPQ LFPD+LI FKNQYIT SGDYLMAE P FFIGLLWLELLLQWPLTLLNLYAISTAKSWLHTTCLIY
Subjt:  MGVLLKLFDSILLVSFLVHALAPPLIGAQLLLPQPLFPDLLIDFKNQYITQSGDYLMAEAPHFFIGLLWLELLLQWPLTLLNLYAISTAKSWLHTTCLIY

Query:  GVSLFSAMAAIAAELIGSQRASGILLKIYLPFLGLGVFTMLRGLLPRCSKATATGHGAVAGPSIATKKKA
        GVSLFSAMAAIAAELIGSQRASGILL IY PFL LGVF MLRGLLP C KAT TGHG  AGPSIATKKKA
Subjt:  GVSLFSAMAAIAAELIGSQRASGILLKIYLPFLGLGVFTMLRGLLPRCSKATATGHGAVAGPSIATKKKA

A0A5D3CY30 Transmembrane protein 97-like

1.6e-70

87.65

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Query:  MGVLLKLFDSILLVSFLVHALAPPLIGAQLLLPQPLFPDLLIDFKNQYITQSGDYLMAEAPHFFIGLLWLELLLQWPLTLLNLYAISTAKSWLHTTCLIY
        MG  LKLF+S+L V FLVHALAPPLIGAQLLLPQ LFPD+LI FKNQYIT SGDYLMAE P FFIGLLWLELLLQWPLTLLNLYAISTAKSWLHTTCLIY
Subjt:  MGVLLKLFDSILLVSFLVHALAPPLIGAQLLLPQPLFPDLLIDFKNQYITQSGDYLMAEAPHFFIGLLWLELLLQWPLTLLNLYAISTAKSWLHTTCLIY

Query:  GVSLFSAMAAIAAELIGSQRASGILLKIYLPFLGLGVFTMLRGLLPRCSKATATGHGAVAGPSIATKKKA
        GVSLFSAMAAIAAELIGSQRASGILL IY PFL LGVF MLRGLLP C KAT TGHG  AGPSIATKKKA
Subjt:  GVSLFSAMAAIAAELIGSQRASGILLKIYLPFLGLGVFTMLRGLLPRCSKATATGHGAVAGPSIATKKKA

A0A6J1EU13 sigma intracellular receptor 2-like

3.4e-65

80.47

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Query:  MGVLLKLFDSILLVSFLVHALAPPLIGAQLLLPQPLFPDLLIDFKNQYITQSGDYLMAEAPHFFIGLLWLELLLQWPLTLLNLYAISTAKSWLHTTCLIY
        MGVLLKLFDS+L V   VHA+APPLIGAQLLLP  LFPD+L+DFK  Y+  SGDYLMAEAP FF+GLLWLELLLQWPLT+ NLYAI  AKSWLHTTCLIY
Subjt:  MGVLLKLFDSILLVSFLVHALAPPLIGAQLLLPQPLFPDLLIDFKNQYITQSGDYLMAEAPHFFIGLLWLELLLQWPLTLLNLYAISTAKSWLHTTCLIY

Query:  GVSLFSAMAAIAAELIGSQRASGILLKIYLPFLGLGVFTMLRGLLPRCSKATATGHGAVAGPSIATKKK
        GVSLFSAM AIAAELIGSQRASG+LLK+YLPFLGLGV   LRGLLPRCSKAT TGH    GPSIA KKK
Subjt:  GVSLFSAMAAIAAELIGSQRASGILLKIYLPFLGLGVFTMLRGLLPRCSKATATGHGAVAGPSIATKKK

A0A6J1JCI5 sigma intracellular receptor 2-like

1.5e-65

80.47

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Query:  MGVLLKLFDSILLVSFLVHALAPPLIGAQLLLPQPLFPDLLIDFKNQYITQSGDYLMAEAPHFFIGLLWLELLLQWPLTLLNLYAISTAKSWLHTTCLIY
        MGVLLKLFDS+L VS  VHA+APPLIGAQLLLP  LFPD+L+DFK  Y+  SGDYLMAEAP FF+GLLWLELLLQWPLT+ NLYAI  AKSWLHTTCLIY
Subjt:  MGVLLKLFDSILLVSFLVHALAPPLIGAQLLLPQPLFPDLLIDFKNQYITQSGDYLMAEAPHFFIGLLWLELLLQWPLTLLNLYAISTAKSWLHTTCLIY

Query:  GVSLFSAMAAIAAELIGSQRASGILLKIYLPFLGLGVFTMLRGLLPRCSKATATGHGAVAGPSIATKKK
        GVSLF+AM AIAAELIGSQRASG+LLK+YLPFLGLGV   LRGLLPRCSKAT TGH    GPSIA KKK
Subjt:  GVSLFSAMAAIAAELIGSQRASGILLKIYLPFLGLGVFTMLRGLLPRCSKATATGHGAVAGPSIATKKK

SwissProt top hits

e value

%identity

Alignment

Q6DFQ5 Sigma intracellular receptor 2

7.3e-04

25.32

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Query:  MGVLLKLFDSILLVSFLVHALAPPLIGAQLLLPQPLFPDLLIDFKNQYITQSGDYLMAEAPHFFIGLLWLELLLQWPLTLLNLYA-ISTAKSWLHTTCLI
        M V  +L + I    F  H     L+  Q +LP  L+P  L+D    Y     D+LMA  P +F   ++ E +LQ P   +  YA       W+    ++
Subjt:  MGVLLKLFDSILLVSFLVHALAPPLIGAQLLLPQPLFPDLLIDFKNQYITQSGDYLMAEAPHFFIGLLWLELLLQWPLTLLNLYA-ISTAKSWLHTTCLI

Query:  YGVSLFSAMAAIAAELIG------------SQRASGILLKIYLPFLGLGVFTML
        Y   + + + AI   ++             +Q+    L+ IY P+L + V  +L
Subjt:  YGVSLFSAMAAIAAELIG------------SQRASGILLKIYLPFLGLGVFTML

Arabidopsis top hits

e value

%identity

Alignment

AT1G05210.1 Transmembrane protein 97, predicted

4.3e-36

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Query:  MGVLLKLFDSILLVSFLVHALAPPLIGAQLLLPQPLFPDLLIDFKNQYITQSGDYLMAEAPHFFIGLLWLELLLQWPLTLLNLYAISTAKSWLHTTCLIY
        MG L KL D  L V F+  A+  PLI  Q  LP  ++P  L D K++YI   GDYL+ E PHF +GL+W ELL  WPL++ N+YAI   KSW  TTCL+Y
Subjt:  MGVLLKLFDSILLVSFLVHALAPPLIGAQLLLPQPLFPDLLIDFKNQYITQSGDYLMAEAPHFFIGLLWLELLLQWPLTLLNLYAISTAKSWLHTTCLIY

Query:  GVSLFSAMAAIAAELIGSQRASGILLKIYLPFLGLGVFTMLRGLLPRCSKATAT
        G SL ++MAAI  ++IGS +AS  LL +Y+PF+G G+  +LRGL+ R +K T +
Subjt:  GVSLFSAMAAIAAELIGSQRASGILLKIYLPFLGLGVFTMLRGLLPRCSKATAT

AT1G05220.1 Transmembrane protein 97, predicted

1.1e-28

44.81

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Query:  MGVLLKLFDSILLVSFLVHALAPPLIGAQLLLPQPLFPDLLIDFKNQYITQSGDYLMAEAPHFFIGLLWLELLLQWPLTLLNLYAISTAKSWLHTTCLIY
        MG L KL +  L   F + A+  PL+  Q+L P  ++P LL D K+ Y ++  DYL  E P FF+GL+W E++   PL+++N+YAI T+KSW  TT L+Y
Subjt:  MGVLLKLFDSILLVSFLVHALAPPLIGAQLLLPQPLFPDLLIDFKNQYITQSGDYLMAEAPHFFIGLLWLELLLQWPLTLLNLYAISTAKSWLHTTCLIY

Query:  GVSLFSAMAAIAAELIGSQRASGILLKIYLPFLGLGVFTMLRGLLPRCSKATAT
        G S  ++MAAI  ++IGS++ +  LL  YLPF+GL +  MLRGL+  CS   +T
Subjt:  GVSLFSAMAAIAAELIGSQRASGILLKIYLPFLGLGVFTMLRGLLPRCSKATAT

AT1G05220.2 Transmembrane protein 97, predicted

1.1e-28

44.81

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Query:  MGVLLKLFDSILLVSFLVHALAPPLIGAQLLLPQPLFPDLLIDFKNQYITQSGDYLMAEAPHFFIGLLWLELLLQWPLTLLNLYAISTAKSWLHTTCLIY
        MG L KL +  L   F + A+  PL+  Q+L P  ++P LL D K+ Y ++  DYL  E P FF+GL+W E++   PL+++N+YAI T+KSW  TT L+Y
Subjt:  MGVLLKLFDSILLVSFLVHALAPPLIGAQLLLPQPLFPDLLIDFKNQYITQSGDYLMAEAPHFFIGLLWLELLLQWPLTLLNLYAISTAKSWLHTTCLIY

Query:  GVSLFSAMAAIAAELIGSQRASGILLKIYLPFLGLGVFTMLRGLLPRCSKATAT
        G S  ++MAAI  ++IGS++ +  LL  YLPF+GL +  MLRGL+  CS   +T
Subjt:  GVSLFSAMAAIAAELIGSQRASGILLKIYLPFLGLGVFTMLRGLLPRCSKATAT

AT2G32380.1 Transmembrane protein 97, predicted

3.7e-35

44.97

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Query:  MGVLLKLFDSILLVSFLVHALAPPLIGAQLLLPQPLFPDLLIDFKNQYITQSGDYLMAEAPHFFIGLLWLELLLQWPLTLLNLYAISTAKSWLHTTCLIY
        MG   KL D++L + F + A+  PLI  Q  LP  +FP  ++D    YI + GDYL+ E PHF +GL+W ELLL WPL+++N+YAI   KSW  TT ++Y
Subjt:  MGVLLKLFDSILLVSFLVHALAPPLIGAQLLLPQPLFPDLLIDFKNQYITQSGDYLMAEAPHFFIGLLWLELLLQWPLTLLNLYAISTAKSWLHTTCLIY

Query:  GVSLFSAMAAIAAELIGSQRASGILLKIYLPFLGLGVFTMLRGLLPRCSKATATGHGAVAGPSIATKKK
        G S+ ++MAAI  E+IGS +AS  LL +Y+PF+G+G+  +LRGLL   S++  +G      P+I  ++K
Subjt:  GVSLFSAMAAIAAELIGSQRASGILLKIYLPFLGLGVFTMLRGLLPRCSKATATGHGAVAGPSIATKKK

Sequences

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CDS sequence

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ATGGGGGTTCTTCTCAAGCTCTTCGATTCAATTCTGCTTGTGTCCTTCCTTGTACATGCCTTGGCGCCTCCTCTCATCGGCGCCCAGTTATTACTCCCTCAACCCCTTTT
CCCCGATCTTCTCATTGATTTCAAAAACCAGTACATCACGCAATCGGGAGATTATCTGATGGCCGAGGCCCCTCACTTTTTCATTGGCTTGCTTTGGCTGGAGCTTCTCC
TTCAATGGCCGCTCACACTTCTCAATCTCTATGCCATCTCCACTGCAAAATCATGGCTGCACACCACCTGTTTGATCTATGGCGTCTCCCTCTTCTCTGCTATGGCTGCT
ATAGCAGCTGAATTGATAGGGTCACAGAGGGCATCTGGCATACTGTTGAAAATATATCTCCCTTTCTTGGGGTTGGGAGTTTTCACCATGCTACGTGGCCTGCTGCCGCG
CTGCAGCAAGGCTACGGCCACCGGCCACGGTGCTGTAGCTGGACCATCAATTGCCACAAAAAAGAAGGCCTGA

mRNA sequence

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TGAGAAGTCAACATCTCAAAATCAATGAATCTTCCACAGTCGCTTCCCTGAAAGTGAAACAATGGGGGTTCTTCTCAAGCTCTTCGATTCAATTCTGCTTGTGTCCTTCC
TTGTACATGCCTTGGCGCCTCCTCTCATCGGCGCCCAGTTATTACTCCCTCAACCCCTTTTCCCCGATCTTCTCATTGATTTCAAAAACCAGTACATCACGCAATCGGGA
GATTATCTGATGGCCGAGGCCCCTCACTTTTTCATTGGCTTGCTTTGGCTGGAGCTTCTCCTTCAATGGCCGCTCACACTTCTCAATCTCTATGCCATCTCCACTGCAAA
ATCATGGCTGCACACCACCTGTTTGATCTATGGCGTCTCCCTCTTCTCTGCTATGGCTGCTATAGCAGCTGAATTGATAGGGTCACAGAGGGCATCTGGCATACTGTTGA
AAATATATCTCCCTTTCTTGGGGTTGGGAGTTTTCACCATGCTACGTGGCCTGCTGCCGCGCTGCAGCAAGGCTACGGCCACCGGCCACGGTGCTGTAGCTGGACCATCA
ATTGCCACAAAAAAGAAGGCCTGAAGAAAACAAATGACATCTCGCGTTGCCAATTTCTCTAAGCTCCCCTCTATTTCATTTTATTCTTCCAACTTCCATTAGGGACCAAA
AAAATCAGTGAACACAGATACAGAGAAGAAAGCATCCAACTCAACAACAGCAAAGTTGAATTTAACACTCATGTTTTAGTTTCATCATCCTTAAAAGAAGCATCATCAGC
AACAGAAGCCAAACCAAGACTCTCCTCAACTTTTCTCCAAGCCTTCAAAGATTCAGGAGGAAACTTCTTCCTTATAGTCCTGATTAAACCCTTAGCTTCTTTCATCTTCT
TCTTCTCCACTAGCCCCTCCACCAAATACTTCACTGTGCTAAAATCAGGAATCTTATGCATCTTCACACTCTCCTTGAAAACCTTATACCCTTTCTCATACTCCCCATTT
CTACAGAGATAATATATAAATGTCCTAAAAGTTGCAGCATTCTTATTACACCCATAAACCTCCATATCATCATACACTTTCTTTGCTTCATCAATCATCACATTCTTACA
ATAACAAGTCATCAAGTAATTATAACTAATCGTGTCGGGTTTCAAACCTGAATTAGCCATTTCCTCGATTAAAGCTTGCACATGCTCTGGCTGGCCACCATGCTCGTGCA
TCAATCTAACATTATAGGCTCCCACATCAAGTTCACACCCTTTTGATATCATCTTGTTCCAGATTTTATCTGCCTCTTCGCTCTCACCCTTCTTGTACAGAGCATCTAAA
ATGGTTGTGAATGTCACCGTAGTTACCTCCACGCCATTTTCCTC

Protein sequence

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MGVLLKLFDSILLVSFLVHALAPPLIGAQLLLPQPLFPDLLIDFKNQYITQSGDYLMAEAPHFFIGLLWLELLLQWPLTLLNLYAISTAKSWLHTTCLIYGVSLFSAMAA
IAAELIGSQRASGILLKIYLPFLGLGVFTMLRGLLPRCSKATATGHGAVAGPSIATKKKA

Lsi07G002130 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome