; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi07G002300 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G002300
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionprotein SHI RELATED SEQUENCE 1-like
Genome locationchr07:2538914..2540598
RNA-Seq ExpressionLsi07G002300
SyntenyLsi07G002300
Gene Ontology termsGO:0009734 - auxin-activated signaling pathway (biological process)
GO:0009851 - auxin biosynthetic process (biological process)
GO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR006510 - Zinc finger, lateral root primordium type 1
IPR006511 - SHORT INTERNODES, C-terminal
IPR007818 - SHI protein family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7031235.1 Protein SHORT INTERNODES, partial [Cucurbita argyrosperma subsp. argyrosperma]1.6e-10369.55Show/hide
Query:  MAGFFPLGGAGSSGRGSNYHFPTTTTTITTTTGGGGGEIIHPSEGLFWYKNYERLETWEEEQHQQQQAEQGGEGFVYSGDESPARSSLVMVRSGRGGGGG
        MAGF+PLGG    GR  NYH PTTTTT T              +GLFWY+NYE LE W+++Q QQ    Q GEGFVYSGDESP RSSLVM+RSGR  GGG
Subjt:  MAGFFPLGGAGSSGRGSNYHFPTTTTTITTTTGGGGGEIIHPSEGLFWYKNYERLETWEEEQHQQQQAEQGGEGFVYSGDESPARSSLVMVRSGRGGGGG

Query:  HVTSCHDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRYLRCDASNPKRPKDNPAASSGFEMGNFPVEVSSTAVFRCVRMTALDETKDQ
         V SC DCGNQAKKDC+HMRCRTCCKSRGF+CETHVKSTWVPASKRR+R+LR D +N KRP+DN AASSG EMGNFPVEVSSTAVFRCVRMT LDET DQ
Subjt:  HVTSCHDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRYLRCDASNPKRPKDNPAASSGFEMGNFPVEVSSTAVFRCVRMTALDETKDQ

Query:  YAYQTAVNIGGHIFKGILYDHGPEQ--------PPTSASPDAAAILITTAE--------SAALLDPPPSYPTPLTTYIAAGTQFFIPPS
        +AYQTAVNIGGH FKGILYDHGPEQ        PP SASPD   +LIT           SAALLDPPP YP PL TY+AAGTQFF+PP+
Subjt:  YAYQTAVNIGGHIFKGILYDHGPEQ--------PPTSASPDAAAILITTAE--------SAALLDPPPSYPTPLTTYIAAGTQFFIPPS

XP_004146546.1 protein SHI RELATED SEQUENCE 1 [Cucumis sativus]2.6e-10975.8Show/hide
Query:  MAGFFPLGGAGSSGRGSNYHFPTTTTTITTTTGGGGGEIIHP-SEGLFWYKNYERLETWEEEQHQQQQ---AEQGGEGFVYSGDESPARSSLVMVRSGR-
        MAGFFPL G GS GR  NYHFPT TT         GGEIIHP +EGLFWYKNYERLETWE E+ QQQQ    EQGGEGFVYSGDESPARSSLVMVRSGR 
Subjt:  MAGFFPLGGAGSSGRGSNYHFPTTTTTITTTTGGGGGEIIHP-SEGLFWYKNYERLETWEEEQHQQQQ---AEQGGEGFVYSGDESPARSSLVMVRSGR-

Query:  -GGGGGHVTSCHDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRYLRCDASNPKRPKDN--PAASSGFEMGNFPVEVSSTAVFRCVRMT
         GGGGG VTSC DCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDR+LR D  N KRPKD      SSG +MGNFP EV++ AVFRCVRMT
Subjt:  -GGGGGHVTSCHDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRYLRCDASNPKRPKDN--PAASSGFEMGNFPVEVSSTAVFRCVRMT

Query:  ALDETKDQYAYQTAVNIGGHIFKGILYDHGPEQPPTSASPDAAAILITTAESAALLDPPPSYPTPLTTYIAAGTQFFIPPS
        +LDET DQYAYQTAVNIGG IFKGILYDHGPEQPP   S          + SAALLDP P YPTPL+TYI AGTQFF+PPS
Subjt:  ALDETKDQYAYQTAVNIGGHIFKGILYDHGPEQPPTSASPDAAAILITTAESAALLDPPPSYPTPLTTYIAAGTQFFIPPS

XP_008465489.1 PREDICTED: protein SHI RELATED SEQUENCE 1-like [Cucumis melo]4.9e-10875.53Show/hide
Query:  MAGFFPLGGAGSSGRGSNYHFPTTTTTITTTTGGGGGEIIHP-SEGLFWYKNYERLETWE-EEQHQQQQ---AEQGGEGFVYSGDESPARSSLVMVRSGR
        MAGFFPL G GS GR  NYHFPT TT         GGEIIHP +EGLFWYKNYERLETWE EE+HQQQQ    EQGGEGFVYSGDESPARSSLVMVRSGR
Subjt:  MAGFFPLGGAGSSGRGSNYHFPTTTTTITTTTGGGGGEIIHP-SEGLFWYKNYERLETWE-EEQHQQQQ---AEQGGEGFVYSGDESPARSSLVMVRSGR

Query:  GG--GGGHVTSCHDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRYLRCDASNPKRPKDN--PAASSGFEMGNFPVEVSSTAVFRCVRM
        GG  GGG VTSC DCGNQAKKDC HMRCRTCCKSRGFECETHVKSTWVPASKRRDR LR D  N KRPKD      SSG +M NFP+EV++ AVFRCVRM
Subjt:  GG--GGGHVTSCHDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRYLRCDASNPKRPKDN--PAASSGFEMGNFPVEVSSTAVFRCVRM

Query:  TALDETKDQYAYQTAVNIGGHIFKGILYDHGPEQPPTSASPDAAAILITTAESAALLDPPPSYPTPLTTYIAAGTQFFIPPS
        T LDET DQYAYQTAVNIGGHIFKGILYDHGPEQPP   S  +A         AALLD  P YPTPL+TYI AGTQFF+PPS
Subjt:  TALDETKDQYAYQTAVNIGGHIFKGILYDHGPEQPPTSASPDAAAILITTAESAALLDPPPSYPTPLTTYIAAGTQFFIPPS

XP_038881624.1 protein SHI RELATED SEQUENCE 1-like isoform X1 [Benincasa hispida]5.6e-12885.35Show/hide
Query:  MAGFFPLGGAGSSGRGSNYHFPTTTTTITTTTGGGGGEIIHPSEGLFWYKNYERLETWEEEQHQQQQAEQGGEGFVYSGDESPARSSLVMVRSGRGGGGG
        MAGFFPL G GSSGRG NY FPTTTTT TT    GGGEIIHP++GLFWYKNYERLETWEE   QQQQ EQGGEGFVYSGDESPARSSLVMVRSGRGG GG
Subjt:  MAGFFPLGGAGSSGRGSNYHFPTTTTTITTTTGGGGGEIIHPSEGLFWYKNYERLETWEEEQHQQQQAEQGGEGFVYSGDESPARSSLVMVRSGRGGGGG

Query:  HVTSCHDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRYLRCDASNPKRPKDNPAASSGFEMGNFPVEVSSTAVFRCVRMTALDETKDQ
         V SC DCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRR+R+LRCD SNPKRPKD  AASSG EMG FP EVSSTAVFRCVRMT LDET +Q
Subjt:  HVTSCHDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRYLRCDASNPKRPKDNPAASSGFEMGNFPVEVSSTAVFRCVRMTALDETKDQ

Query:  YAYQTAVNIGGHIFKGILYDHGPEQPPTSASPDAAAILITTAESAALLDPPPSYPTPLTTYIAAGTQFFIPPS
         AYQTAVNIGGHIFKGILYDHGPEQPPTSASP+  A+LITTAESA LLDPPP YPTPLTTYI AGTQFF+PP+
Subjt:  YAYQTAVNIGGHIFKGILYDHGPEQPPTSASPDAAAILITTAESAALLDPPPSYPTPLTTYIAAGTQFFIPPS

XP_038881630.1 protein SHI RELATED SEQUENCE 1-like isoform X2 [Benincasa hispida]5.6e-12885.35Show/hide
Query:  MAGFFPLGGAGSSGRGSNYHFPTTTTTITTTTGGGGGEIIHPSEGLFWYKNYERLETWEEEQHQQQQAEQGGEGFVYSGDESPARSSLVMVRSGRGGGGG
        MAGFFPL G GSSGRG NY FPTTTTT TT    GGGEIIHP++GLFWYKNYERLETWEE   QQQQ EQGGEGFVYSGDESPARSSLVMVRSGRGG GG
Subjt:  MAGFFPLGGAGSSGRGSNYHFPTTTTTITTTTGGGGGEIIHPSEGLFWYKNYERLETWEEEQHQQQQAEQGGEGFVYSGDESPARSSLVMVRSGRGGGGG

Query:  HVTSCHDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRYLRCDASNPKRPKDNPAASSGFEMGNFPVEVSSTAVFRCVRMTALDETKDQ
         V SC DCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRR+R+LRCD SNPKRPKD  AASSG EMG FP EVSSTAVFRCVRMT LDET +Q
Subjt:  HVTSCHDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRYLRCDASNPKRPKDNPAASSGFEMGNFPVEVSSTAVFRCVRMTALDETKDQ

Query:  YAYQTAVNIGGHIFKGILYDHGPEQPPTSASPDAAAILITTAESAALLDPPPSYPTPLTTYIAAGTQFFIPPS
         AYQTAVNIGGHIFKGILYDHGPEQPPTSASP+  A+LITTAESA LLDPPP YPTPLTTYI AGTQFF+PP+
Subjt:  YAYQTAVNIGGHIFKGILYDHGPEQPPTSASPDAAAILITTAESAALLDPPPSYPTPLTTYIAAGTQFFIPPS

TrEMBL top hitse value%identityAlignment
A0A0A0KUG2 Uncharacterized protein1.3e-10975.8Show/hide
Query:  MAGFFPLGGAGSSGRGSNYHFPTTTTTITTTTGGGGGEIIHP-SEGLFWYKNYERLETWEEEQHQQQQ---AEQGGEGFVYSGDESPARSSLVMVRSGR-
        MAGFFPL G GS GR  NYHFPT TT         GGEIIHP +EGLFWYKNYERLETWE E+ QQQQ    EQGGEGFVYSGDESPARSSLVMVRSGR 
Subjt:  MAGFFPLGGAGSSGRGSNYHFPTTTTTITTTTGGGGGEIIHP-SEGLFWYKNYERLETWEEEQHQQQQ---AEQGGEGFVYSGDESPARSSLVMVRSGR-

Query:  -GGGGGHVTSCHDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRYLRCDASNPKRPKDN--PAASSGFEMGNFPVEVSSTAVFRCVRMT
         GGGGG VTSC DCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDR+LR D  N KRPKD      SSG +MGNFP EV++ AVFRCVRMT
Subjt:  -GGGGGHVTSCHDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRYLRCDASNPKRPKDN--PAASSGFEMGNFPVEVSSTAVFRCVRMT

Query:  ALDETKDQYAYQTAVNIGGHIFKGILYDHGPEQPPTSASPDAAAILITTAESAALLDPPPSYPTPLTTYIAAGTQFFIPPS
        +LDET DQYAYQTAVNIGG IFKGILYDHGPEQPP   S          + SAALLDP P YPTPL+TYI AGTQFF+PPS
Subjt:  ALDETKDQYAYQTAVNIGGHIFKGILYDHGPEQPPTSASPDAAAILITTAESAALLDPPPSYPTPLTTYIAAGTQFFIPPS

A0A1S3CNX3 protein SHI RELATED SEQUENCE 1-like2.4e-10875.53Show/hide
Query:  MAGFFPLGGAGSSGRGSNYHFPTTTTTITTTTGGGGGEIIHP-SEGLFWYKNYERLETWE-EEQHQQQQ---AEQGGEGFVYSGDESPARSSLVMVRSGR
        MAGFFPL G GS GR  NYHFPT TT         GGEIIHP +EGLFWYKNYERLETWE EE+HQQQQ    EQGGEGFVYSGDESPARSSLVMVRSGR
Subjt:  MAGFFPLGGAGSSGRGSNYHFPTTTTTITTTTGGGGGEIIHP-SEGLFWYKNYERLETWE-EEQHQQQQ---AEQGGEGFVYSGDESPARSSLVMVRSGR

Query:  GG--GGGHVTSCHDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRYLRCDASNPKRPKDN--PAASSGFEMGNFPVEVSSTAVFRCVRM
        GG  GGG VTSC DCGNQAKKDC HMRCRTCCKSRGFECETHVKSTWVPASKRRDR LR D  N KRPKD      SSG +M NFP+EV++ AVFRCVRM
Subjt:  GG--GGGHVTSCHDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRYLRCDASNPKRPKDN--PAASSGFEMGNFPVEVSSTAVFRCVRM

Query:  TALDETKDQYAYQTAVNIGGHIFKGILYDHGPEQPPTSASPDAAAILITTAESAALLDPPPSYPTPLTTYIAAGTQFFIPPS
        T LDET DQYAYQTAVNIGGHIFKGILYDHGPEQPP   S  +A         AALLD  P YPTPL+TYI AGTQFF+PPS
Subjt:  TALDETKDQYAYQTAVNIGGHIFKGILYDHGPEQPPTSASPDAAAILITTAESAALLDPPPSYPTPLTTYIAAGTQFFIPPS

A0A5A7TNR6 Protein SHI RELATED SEQUENCE 1-like2.4e-10875.53Show/hide
Query:  MAGFFPLGGAGSSGRGSNYHFPTTTTTITTTTGGGGGEIIHP-SEGLFWYKNYERLETWE-EEQHQQQQ---AEQGGEGFVYSGDESPARSSLVMVRSGR
        MAGFFPL G GS GR  NYHFPT TT         GGEIIHP +EGLFWYKNYERLETWE EE+HQQQQ    EQGGEGFVYSGDESPARSSLVMVRSGR
Subjt:  MAGFFPLGGAGSSGRGSNYHFPTTTTTITTTTGGGGGEIIHP-SEGLFWYKNYERLETWE-EEQHQQQQ---AEQGGEGFVYSGDESPARSSLVMVRSGR

Query:  GG--GGGHVTSCHDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRYLRCDASNPKRPKDN--PAASSGFEMGNFPVEVSSTAVFRCVRM
        GG  GGG VTSC DCGNQAKKDC HMRCRTCCKSRGFECETHVKSTWVPASKRRDR LR D  N KRPKD      SSG +M NFP+EV++ AVFRCVRM
Subjt:  GG--GGGHVTSCHDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRYLRCDASNPKRPKDN--PAASSGFEMGNFPVEVSSTAVFRCVRM

Query:  TALDETKDQYAYQTAVNIGGHIFKGILYDHGPEQPPTSASPDAAAILITTAESAALLDPPPSYPTPLTTYIAAGTQFFIPPS
        T LDET DQYAYQTAVNIGGHIFKGILYDHGPEQPP   S  +A         AALLD  P YPTPL+TYI AGTQFF+PPS
Subjt:  TALDETKDQYAYQTAVNIGGHIFKGILYDHGPEQPPTSASPDAAAILITTAESAALLDPPPSYPTPLTTYIAAGTQFFIPPS

A0A6J1FUH1 protein SHORT INTERNODES-like5.1e-10369.79Show/hide
Query:  MAGFFPLGGAGSSGRGSNYHFPTTTTTITTTTGGGGGEIIHPSEGLFWYKNYERLETWEEEQHQQQQAEQGGEGFVYSGDESPARSSLVMVRSGRGGGGG
        MAGFFPLGG    GR  NYH PTTTTT T              +GLFWY+NYE L  W+++Q QQ    Q GEGFVYSGDESP RSSLVM+RSGR  GGG
Subjt:  MAGFFPLGGAGSSGRGSNYHFPTTTTTITTTTGGGGGEIIHPSEGLFWYKNYERLETWEEEQHQQQQAEQGGEGFVYSGDESPARSSLVMVRSGRGGGGG

Query:  HVTSCHDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRYLRCDASNPKRPKDNPAASSGFEMGNFPVEVSSTAVFRCVRMTALDETKDQ
         V SC DCGNQAKKDC+HMRCRTCCKSRGF+CETHVKSTWVPASKRR+R+LR D +N KRP+DN AASSG EM NFPVEVSSTAVFRCVRMT LDET DQ
Subjt:  HVTSCHDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRYLRCDASNPKRPKDNPAASSGFEMGNFPVEVSSTAVFRCVRMTALDETKDQ

Query:  YAYQTAVNIGGHIFKGILYDHGPEQ-------PPTSASPDAAAILITTAE--------SAALLDPPPSYPTPLTTYIAAGTQFFIPPS
        +AYQTAVNIGGH FKGILYDHGPEQ       PP SASPD  A+LIT           SAALLDPPP YP PL TY+AAGTQFF+PP+
Subjt:  YAYQTAVNIGGHIFKGILYDHGPEQ-------PPTSASPDAAAILITTAE--------SAALLDPPPSYPTPLTTYIAAGTQFFIPPS

A0A6J1J480 protein SHI RELATED SEQUENCE 1-like3.0e-10370.73Show/hide
Query:  MAGFFPLGGAGSSGRGSNYHFPTTTTTITTTTGGGGGEIIHPSEGLFWYKNYERLETWEEEQHQQQQAEQGGEGFVYSGDESPARSSLVMVRSGRGGGGG
        MAGFFPLGG    GR  NYH PTTTTT                +GLFWY+NYE L  W+++Q QQ    Q GEGFVYSGDESP RSSLVM+RSGR  GGG
Subjt:  MAGFFPLGGAGSSGRGSNYHFPTTTTTITTTTGGGGGEIIHPSEGLFWYKNYERLETWEEEQHQQQQAEQGGEGFVYSGDESPARSSLVMVRSGRGGGGG

Query:  HVTSCHDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRYLRCDASNPKRPKDNPAASSGFEMGNFPVEVSSTAVFRCVRMTALDETKDQ
         V SC DCGNQAKKDC+HMRCRTCCKSRGF+CETHVKSTWVPASKRR+R+LR DA+N KRP+DN AASSG EMGNFP+EVSSTAVFRCVRMT LDET DQ
Subjt:  HVTSCHDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRYLRCDASNPKRPKDNPAASSGFEMGNFPVEVSSTAVFRCVRMTALDETKDQ

Query:  YAYQTAVNIGGHIFKGILYDHGPEQ------PPTSASPDAAAILI----TTAE----SAALLDPPPSYPTPLTTYIAAGTQFFIPPS
        +AYQTAVNIGGH FKGILYDHGPEQ      PP SASPD  A+LI    TT E    SAALLDPPP YP PL TY+AAGTQFF+PP+
Subjt:  YAYQTAVNIGGHIFKGILYDHGPEQ------PPTSASPDAAAILI----TTAE----SAALLDPPPSYPTPLTTYIAAGTQFFIPPS

SwissProt top hitse value%identityAlignment
K4B6C9 Protein EXPRESSION OF TERPENOIDS 19.4e-4640.13Show/hide
Query:  YKNYERLETWEEEQHQQQQAEQ-------------------------GGEGF-VYSGDESPARSSLVMVRSGRGGGGGHVTSCHDCGNQAKKDCVHMRCR
        YK +E  ++    QHQ Q  +Q                            GF + +GD   +RS  VM+RSG GG      SC DCGNQAKKDC HMRCR
Subjt:  YKNYERLETWEEEQHQQQQAEQ-------------------------GGEGF-VYSGDESPARSSLVMVRSGRGGGGGHVTSCHDCGNQAKKDCVHMRCR

Query:  TCCKSRGFECETHVKSTWVPASKRRDRYLRCDA--------------SNPKRPKDNPAASS-----------GFEMGNFPVEVSSTAVFRCVRMTALDET
        TCCKSRGF+C+THVKSTWVPA+KRR+R  +  A                 KR +++P+ASS           G E+G FP +V ++AVF+C++M+++++ 
Subjt:  TCCKSRGFECETHVKSTWVPASKRRDRYLRCDA--------------SNPKRPKDNPAASS-----------GFEMGNFPVEVSSTAVFRCVRMTALDET

Query:  KDQYAYQTAVNIGGHIFKGILYDHGPEQP---------PTSASPDA----------AAILITTAESAA---------LLDPPPSYPTPLTTYIAAGTQFF
        +DQ AYQ AV+IGGH+FKGILYD G E            TS+   A          AA+   T  S            LD P  +P PL+T++ AGTQFF
Subjt:  KDQYAYQTAVNIGGHIFKGILYDHGPEQP---------PTSASPDA----------AAILITTAESAA---------LLDPPPSYPTPLTTYIAAGTQFF

Query:  IPPS
         PPS
Subjt:  IPPS

Q9FXH7 Protein SHI RELATED SEQUENCE 73.8e-3939.6Show/hide
Query:  DESPARSSLVMVRSGRGGGGGHVTSCHDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRYLRCDASNPKRPKDN---------------
        D  P RSS       R G      +C DCGNQAKKDC HMRCRTCCKSRGF+C+THVKSTWV A+KRR+R  +      KR +D                
Subjt:  DESPARSSLVMVRSGRGGGGGHVTSCHDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRYLRCDASNPKRPKDN---------------

Query:  ------------------PAASSGFEMGNFPVEVSSTAVFRCVRMTALDETKDQYAYQTAVNIGGHIFKGILYDHGP-----------------------
                           A+SSG E  + P E+SS AVFRC+R++++D+  ++YAYQTAV+IGGH+FKGILYD GP                       
Subjt:  ------------------PAASSGFEMGNFPVEVSSTAVFRCVRMTALDETKDQYAYQTAVNIGGHIFKGILYDHGP-----------------------

Query:  -EQPPTSASPDAAAILITTAESAALLDPPPSY---PTPLTTYIAAGTQFF
         +  P++A+ +A   + T   S   +DP   Y    TP   ++A GT FF
Subjt:  -EQPPTSASPDAAAILITTAESAALLDPPPSY---PTPLTTYIAAGTQFF

Q9LQZ5 Protein SHI RELATED SEQUENCE 58.3e-4236.96Show/hide
Query:  MAGFFPLGGAGSSGRGS---------NYHFPTTTTTITTTTGGGGGEIIHPSEGL-FWYKNYERLETWEEEQHQQQQAEQGGE----GFVYSGDES----
        MAGFF LGG  ++   +         ++H    +  +         EI + ++G   W   Y + +  +++Q QQQ A         G V SG  S    
Subjt:  MAGFFPLGGAGSSGRGS---------NYHFPTTTTTITTTTGGGGGEIIHPSEGL-FWYKNYERLETWEEEQHQQQQAEQGGE----GFVYSGDES----

Query:  -PARSSLVMVRSGRGGGGGHVT-----SCHDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRYLRC-----------DASNPKRPKD--
          +RS    V S    GG  VT     +C DCGNQAKKDC HMRCRTCCKSRGF C+THVKSTWVPA+KRR+R  +            +  N KR ++  
Subjt:  -PARSSLVMVRSGRGGGGGHVT-----SCHDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRYLRC-----------DASNPKRPKD--

Query:  ------------------------NPAASSGFEMG-NFPVEVSSTAVFRCVRMTALDETKDQ--YAYQTAVNIGGHIFKGILYDHGPEQ-----------
                                N  ++SG E+  + P EV+S A+FRCVR+++++E +D   YAYQTAVNIGGHIFKGILYD GPE            
Subjt:  ------------------------NPAASSGFEMG-NFPVEVSSTAVFRCVRMTALDETKDQ--YAYQTAVNIGGHIFKGILYDHGPEQ-----------

Query:  --PPTSASPDAAAILITTAESAALLDPPPSYPTPLTTYIAAGTQFFIPP
            T+    A   +     +  +LDP   YP  L ++I AGT FF PP
Subjt:  --PPTSASPDAAAILITTAESAALLDPPPSYPTPLTTYIAAGTQFFIPP

Q9SD40 Protein SHI RELATED SEQUENCE 17.5e-5138.21Show/hide
Query:  MAGFFPL--GGAGSSGRGSN--------------------YHFPTTTTTITTTTGGGGGEIIHPSEGL--FWYKNYERLETWEEEQHQQQ---QAEQGGE
        MAGFF L  GG G  G G+N                    Y  P       T          + + G    W  + ++   ++ +QHQQ+    +   G 
Subjt:  MAGFFPL--GGAGSSGRGSN--------------------YHFPTTTTTITTTTGGGGGEIIHPSEGL--FWYKNYERLETWEEEQHQQQ---QAEQGGE

Query:  G--------FVYSGDESPA----RSSLVMVRSGRGGGGGHVTSCHDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDR-----------Y
        G        F  SG+ S A     ++++M+RSG  GGG    SC DCGNQAKKDC HMRCRTCCKSRGFEC THV+STWVPA+KRR+R            
Subjt:  G--------FVYSGDESPA----RSSLVMVRSGRGGGGGHVTSCHDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDR-----------Y

Query:  LRCDASNPKRPKDN-PAAS-----------SGFEMGNFPVEVSSTAVFRCVRMTALDETKDQYAYQTAVNIGGHIFKGILYDHGPEQ-------------
        L    S PKR ++N PA S           SG E+GNFP EVSS+AVFRCVR++++++ ++++AYQTAV+IGGHIFKGILYD GP               
Subjt:  LRCDASNPKRPKDN-PAAS-----------SGFEMGNFPVEVSSTAVFRCVRMTALDETKDQYAYQTAVNIGGHIFKGILYDHGPEQ-------------

Query:  ----------------------PPTSASPDAAAILITTAESAALLDPPPSYPTPLTTYIAAGTQFFIPP
                                +S++P+   I  ++A +A  +DP   YPTP+ T++ AGTQFF  P
Subjt:  ----------------------PPTSASPDAAAILITTAESAALLDPPPSYPTPLTTYIAAGTQFFIPP

Q9XGX0 Protein SHORT INTERNODES1.0e-4739.27Show/hide
Query:  MAGFFPLGGAGSSGRGSNYHFPTTTTTITTT-------------TGGGGGEIIHPSEGLFWYKNYERLETWEEEQHQQQQAE----QGGEGFVYSGDE--
        MAGFF LG  G      N+   T   + + T              GG  G     +  L+ + N + +  ++++Q QQQ+ +      G G   S     
Subjt:  MAGFFPLGGAGSSGRGSNYHFPTTTTTITTT-------------TGGGGGEIIHPSEGLFWYKNYERLETWEEEQHQQQQAE----QGGEGFVYSGDE--

Query:  SPARSSLVMVRSGRGGGGGHVTSCHDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRYLRCD---------ASNPKRPKDN-PAAS---
          +  +L+M+RSG G GG    SC DCGNQ+KKDC HMRCRTCCKSRG +C THVKSTWVPA+KRR+R  +            S PKR ++  PA S   
Subjt:  SPARSSLVMVRSGRGGGGGHVTSCHDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRYLRCD---------ASNPKRPKDN-PAAS---

Query:  ----------SGFEMGNFPVEVSSTAVFRCVRMTALDETKDQYAYQTAVNIGGHIFKGILYDHGPEQPPTSASPDAAAILITTAESAALLDPPPS-----
                  SG E+GNFP EVSS+AVFRCVR++++D+ +++YAY+TAV+IGGH+FKG+LYD GP +  +S        LIT   SA+   P  S     
Subjt:  ----------SGFEMGNFPVEVSSTAVFRCVRMTALDETKDQYAYQTAVNIGGHIFKGILYDHGPEQPPTSASPDAAAILITTAESAALLDPPPS-----

Query:  ---------------YPTPLTTYIAAGTQFF
                       YPTP+ T++  GT FF
Subjt:  ---------------YPTPLTTYIAAGTQFF

Arabidopsis top hitse value%identityAlignment
AT1G19790.1 SHI-related sequence 72.7e-4039.6Show/hide
Query:  DESPARSSLVMVRSGRGGGGGHVTSCHDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRYLRCDASNPKRPKDN---------------
        D  P RSS       R G      +C DCGNQAKKDC HMRCRTCCKSRGF+C+THVKSTWV A+KRR+R  +      KR +D                
Subjt:  DESPARSSLVMVRSGRGGGGGHVTSCHDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRYLRCDASNPKRPKDN---------------

Query:  ------------------PAASSGFEMGNFPVEVSSTAVFRCVRMTALDETKDQYAYQTAVNIGGHIFKGILYDHGP-----------------------
                           A+SSG E  + P E+SS AVFRC+R++++D+  ++YAYQTAV+IGGH+FKGILYD GP                       
Subjt:  ------------------PAASSGFEMGNFPVEVSSTAVFRCVRMTALDETKDQYAYQTAVNIGGHIFKGILYDHGP-----------------------

Query:  -EQPPTSASPDAAAILITTAESAALLDPPPSY---PTPLTTYIAAGTQFF
         +  P++A+ +A   + T   S   +DP   Y    TP   ++A GT FF
Subjt:  -EQPPTSASPDAAAILITTAESAALLDPPPSY---PTPLTTYIAAGTQFF

AT1G19790.2 SHI-related sequence 72.7e-4039.6Show/hide
Query:  DESPARSSLVMVRSGRGGGGGHVTSCHDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRYLRCDASNPKRPKDN---------------
        D  P RSS       R G      +C DCGNQAKKDC HMRCRTCCKSRGF+C+THVKSTWV A+KRR+R  +      KR +D                
Subjt:  DESPARSSLVMVRSGRGGGGGHVTSCHDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRYLRCDASNPKRPKDN---------------

Query:  ------------------PAASSGFEMGNFPVEVSSTAVFRCVRMTALDETKDQYAYQTAVNIGGHIFKGILYDHGP-----------------------
                           A+SSG E  + P E+SS AVFRC+R++++D+  ++YAYQTAV+IGGH+FKGILYD GP                       
Subjt:  ------------------PAASSGFEMGNFPVEVSSTAVFRCVRMTALDETKDQYAYQTAVNIGGHIFKGILYDHGP-----------------------

Query:  -EQPPTSASPDAAAILITTAESAALLDPPPSY---PTPLTTYIAAGTQFF
         +  P++A+ +A   + T   S   +DP   Y    TP   ++A GT FF
Subjt:  -EQPPTSASPDAAAILITTAESAALLDPPPSY---PTPLTTYIAAGTQFF

AT1G75520.1 SHI-related sequence 55.9e-4336.96Show/hide
Query:  MAGFFPLGGAGSSGRGS---------NYHFPTTTTTITTTTGGGGGEIIHPSEGL-FWYKNYERLETWEEEQHQQQQAEQGGE----GFVYSGDES----
        MAGFF LGG  ++   +         ++H    +  +         EI + ++G   W   Y + +  +++Q QQQ A         G V SG  S    
Subjt:  MAGFFPLGGAGSSGRGS---------NYHFPTTTTTITTTTGGGGGEIIHPSEGL-FWYKNYERLETWEEEQHQQQQAEQGGE----GFVYSGDES----

Query:  -PARSSLVMVRSGRGGGGGHVT-----SCHDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRYLRC-----------DASNPKRPKD--
          +RS    V S    GG  VT     +C DCGNQAKKDC HMRCRTCCKSRGF C+THVKSTWVPA+KRR+R  +            +  N KR ++  
Subjt:  -PARSSLVMVRSGRGGGGGHVT-----SCHDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRYLRC-----------DASNPKRPKD--

Query:  ------------------------NPAASSGFEMG-NFPVEVSSTAVFRCVRMTALDETKDQ--YAYQTAVNIGGHIFKGILYDHGPEQ-----------
                                N  ++SG E+  + P EV+S A+FRCVR+++++E +D   YAYQTAVNIGGHIFKGILYD GPE            
Subjt:  ------------------------NPAASSGFEMG-NFPVEVSSTAVFRCVRMTALDETKDQ--YAYQTAVNIGGHIFKGILYDHGPEQ-----------

Query:  --PPTSASPDAAAILITTAESAALLDPPPSYPTPLTTYIAAGTQFFIPP
            T+    A   +     +  +LDP   YP  L ++I AGT FF PP
Subjt:  --PPTSASPDAAAILITTAESAALLDPPPSYPTPLTTYIAAGTQFFIPP

AT3G51060.1 Lateral root primordium (LRP) protein-related5.3e-5238.21Show/hide
Query:  MAGFFPL--GGAGSSGRGSN--------------------YHFPTTTTTITTTTGGGGGEIIHPSEGL--FWYKNYERLETWEEEQHQQQ---QAEQGGE
        MAGFF L  GG G  G G+N                    Y  P       T          + + G    W  + ++   ++ +QHQQ+    +   G 
Subjt:  MAGFFPL--GGAGSSGRGSN--------------------YHFPTTTTTITTTTGGGGGEIIHPSEGL--FWYKNYERLETWEEEQHQQQ---QAEQGGE

Query:  G--------FVYSGDESPA----RSSLVMVRSGRGGGGGHVTSCHDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDR-----------Y
        G        F  SG+ S A     ++++M+RSG  GGG    SC DCGNQAKKDC HMRCRTCCKSRGFEC THV+STWVPA+KRR+R            
Subjt:  G--------FVYSGDESPA----RSSLVMVRSGRGGGGGHVTSCHDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDR-----------Y

Query:  LRCDASNPKRPKDN-PAAS-----------SGFEMGNFPVEVSSTAVFRCVRMTALDETKDQYAYQTAVNIGGHIFKGILYDHGPEQ-------------
        L    S PKR ++N PA S           SG E+GNFP EVSS+AVFRCVR++++++ ++++AYQTAV+IGGHIFKGILYD GP               
Subjt:  LRCDASNPKRPKDN-PAAS-----------SGFEMGNFPVEVSSTAVFRCVRMTALDETKDQYAYQTAVNIGGHIFKGILYDHGPEQ-------------

Query:  ----------------------PPTSASPDAAAILITTAESAALLDPPPSYPTPLTTYIAAGTQFFIPP
                                +S++P+   I  ++A +A  +DP   YPTP+ T++ AGTQFF  P
Subjt:  ----------------------PPTSASPDAAAILITTAESAALLDPPPSYPTPLTTYIAAGTQFFIPP

AT5G66350.1 Lateral root primordium (LRP) protein-related7.2e-4939.27Show/hide
Query:  MAGFFPLGGAGSSGRGSNYHFPTTTTTITTT-------------TGGGGGEIIHPSEGLFWYKNYERLETWEEEQHQQQQAE----QGGEGFVYSGDE--
        MAGFF LG  G      N+   T   + + T              GG  G     +  L+ + N + +  ++++Q QQQ+ +      G G   S     
Subjt:  MAGFFPLGGAGSSGRGSNYHFPTTTTTITTT-------------TGGGGGEIIHPSEGLFWYKNYERLETWEEEQHQQQQAE----QGGEGFVYSGDE--

Query:  SPARSSLVMVRSGRGGGGGHVTSCHDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRYLRCD---------ASNPKRPKDN-PAAS---
          +  +L+M+RSG G GG    SC DCGNQ+KKDC HMRCRTCCKSRG +C THVKSTWVPA+KRR+R  +            S PKR ++  PA S   
Subjt:  SPARSSLVMVRSGRGGGGGHVTSCHDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRYLRCD---------ASNPKRPKDN-PAAS---

Query:  ----------SGFEMGNFPVEVSSTAVFRCVRMTALDETKDQYAYQTAVNIGGHIFKGILYDHGPEQPPTSASPDAAAILITTAESAALLDPPPS-----
                  SG E+GNFP EVSS+AVFRCVR++++D+ +++YAY+TAV+IGGH+FKG+LYD GP +  +S        LIT   SA+   P  S     
Subjt:  ----------SGFEMGNFPVEVSSTAVFRCVRMTALDETKDQYAYQTAVNIGGHIFKGILYDHGPEQPPTSASPDAAAILITTAESAALLDPPPS-----

Query:  ---------------YPTPLTTYIAAGTQFF
                       YPTP+ T++  GT FF
Subjt:  ---------------YPTPLTTYIAAGTQFF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGGTTTTTTCCCACTAGGCGGCGCCGGAAGCAGCGGAAGAGGTTCCAATTATCATTTTCCTACTACTACCACTACTATCACCACCACCACCGGCGGCGGCGGCGG
CGAAATAATTCATCCGAGCGAAGGGTTATTTTGGTACAAGAATTATGAGAGATTGGAAACATGGGAGGAAGAACAGCATCAGCAGCAGCAGGCCGAACAAGGGGGAGAAG
GGTTTGTTTACTCCGGCGATGAATCGCCGGCGAGATCGTCGTTGGTGATGGTGAGATCGGGGAGAGGCGGTGGCGGAGGGCATGTAACGAGCTGCCATGACTGTGGAAAT
CAAGCGAAAAAAGATTGCGTTCACATGCGATGTAGAACTTGTTGTAAAAGCCGTGGGTTTGAGTGTGAAACCCACGTTAAAAGCACTTGGGTTCCCGCCTCCAAACGCCG
TGACCGCTACCTCCGTTGCGACGCCTCTAACCCCAAACGCCCTAAAGATAATCCCGCCGCGTCTTCAGGGTTCGAAATGGGGAATTTTCCGGTGGAAGTGAGCTCAACGG
CGGTGTTTCGGTGCGTACGAATGACAGCGTTGGACGAAACCAAAGACCAATATGCGTATCAAACAGCTGTCAATATTGGAGGCCATATCTTCAAAGGCATTCTTTACGAC
CACGGCCCTGAACAACCACCCACCTCCGCCTCTCCCGACGCCGCCGCAATCCTCATCACCACCGCCGAATCCGCCGCATTGCTCGATCCTCCTCCGTCTTACCCGACTCC
TCTCACCACCTATATCGCCGCCGGTACGCAATTTTTTATTCCCCCATCTTAG
mRNA sequenceShow/hide mRNA sequence
TTTCCATTGGAAAAAAGAAAAAAGAGCTAATGATAAAAGGACACGTGTGTAAATGGTGAGCCGTGGGATGAAGTTGGGGAATTAAAGTAGATGATTGATGATCTCCAGTT
GGAGAGAGAGATGTGAGAAATCTGTAACACAAAATGGCATAAAAAAAAAAGGAGAGAGAAAAAAAAAAGGTAATCAATCATCTCTGCAAAACTGCAACAAAATCAGAGCA
TAGAGAAAGGGAAAGGCCTGAGAGAAGACAGAGAAGAAGAAGAAGAAGAAGAAGGAGAAGAAGAAGAACAAAGATGTGTGGATATGGGACTTCTTTTCTTCTCTATTTAA
GTTAGCACCGCCGTTCCCCATGGCGGCGTTGCAGACTTCAATAAAACCTTTCACAATCTGATTCCCAATTCTACCCTTTCTTCTTCTTTTTTTTTTTCTTTTTCTTTTTC
TTTTTTTAGTACGAAAATTTGATTAAGTGAAAAAAGGAAATTAATACATACCCTTTTTCTCAACACTGGCTTCCGATCATCGTTGAGAGGTTGTGTTTTTTTCTGATATG
GATTTTGATTCAAAATCAGGAAGAATATGGCCGGTTTTTTCCCACTAGGCGGCGCCGGAAGCAGCGGAAGAGGTTCCAATTATCATTTTCCTACTACTACCACTACTATC
ACCACCACCACCGGCGGCGGCGGCGGCGAAATAATTCATCCGAGCGAAGGGTTATTTTGGTACAAGAATTATGAGAGATTGGAAACATGGGAGGAAGAACAGCATCAGCA
GCAGCAGGCCGAACAAGGGGGAGAAGGGTTTGTTTACTCCGGCGATGAATCGCCGGCGAGATCGTCGTTGGTGATGGTGAGATCGGGGAGAGGCGGTGGCGGAGGGCATG
TAACGAGCTGCCATGACTGTGGAAATCAAGCGAAAAAAGATTGCGTTCACATGCGATGTAGAACTTGTTGTAAAAGCCGTGGGTTTGAGTGTGAAACCCACGTTAAAAGC
ACTTGGGTTCCCGCCTCCAAACGCCGTGACCGCTACCTCCGTTGCGACGCCTCTAACCCCAAACGCCCTAAAGATAATCCCGCCGCGTCTTCAGGGTTCGAAATGGGGAA
TTTTCCGGTGGAAGTGAGCTCAACGGCGGTGTTTCGGTGCGTACGAATGACAGCGTTGGACGAAACCAAAGACCAATATGCGTATCAAACAGCTGTCAATATTGGAGGCC
ATATCTTCAAAGGCATTCTTTACGACCACGGCCCTGAACAACCACCCACCTCCGCCTCTCCCGACGCCGCCGCAATCCTCATCACCACCGCCGAATCCGCCGCATTGCTC
GATCCTCCTCCGTCTTACCCGACTCCTCTCACCACCTATATCGCCGCCGGTACGCAATTTTTTATTCCCCCATCTTAGCCGATCCTTTTCCCTTATGATATTTTAATAGG
TGAAATTGAAATGAAGGAGAAGAAAAAAAGAACAATTAAGAGAGTGAAGGAAGTTTCAAGTTTGTGCCAAAAGTATATAATTTTTTATGAATAAATTTATAAGCTTGTAA
TTTTTCCAAGAGAGAGTTTGCATTAATTTGCCGCCATTGTTGG
Protein sequenceShow/hide protein sequence
MAGFFPLGGAGSSGRGSNYHFPTTTTTITTTTGGGGGEIIHPSEGLFWYKNYERLETWEEEQHQQQQAEQGGEGFVYSGDESPARSSLVMVRSGRGGGGGHVTSCHDCGN
QAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRYLRCDASNPKRPKDNPAASSGFEMGNFPVEVSSTAVFRCVRMTALDETKDQYAYQTAVNIGGHIFKGILYD
HGPEQPPTSASPDAAAILITTAESAALLDPPPSYPTPLTTYIAAGTQFFIPPS