; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi07G002400 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G002400
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionType I restriction-modification systemmethyltransferase subunit
Genome locationchr07:2644143..2648694
RNA-Seq ExpressionLsi07G002400
SyntenyLsi07G002400
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GER52497.1 type I restriction-modification systemmethyltransferase subunit [Striga asiatica]5.6e-0433.33Show/hide
Query:  KILQCLLWSSILGITSDHCRPCHHILQRQFIKQVTSR----FHIPKLRIRNNQLSPRNHISLRHFIEHLPPTTQEPTFHIHINHRITNIQIRSKSPNQNR
        K+L   L  S +    +H R    +  + F K+V         +P L I     +PR+H+ L HF+EH+P  TQ P F IHI+HR  ++   ++ PN +R
Subjt:  KILQCLLWSSILGITSDHCRPCHHILQRQFIKQVTSR----FHIPKLRIRNNQLSPRNHISLRHFIEHLPPTTQEPTFHIHINHRITNIQIRSKSPNQNR

Query:  VGVHLLTQIQIKNSPTSFKKRRK
          VH LTQ  I      F   R+
Subjt:  VGVHLLTQIQIKNSPTSFKKRRK

KAF8083292.1 hypothetical protein N665_0783s0002, partial [Sinapis alba]6.0e-0634.82Show/hide
Query:  NQLSPRNHISLRHFIEHLPPTTQEPTFHIHINHRITNIQIRSKSPNQNRVGVHLLTQIQIKNSPTSFKKRRKRKRNRTDAIPPHSRIQVNRFRQGSLKRI
        N   P N+ISLRHF+EHL    + PTF I IN R T+IQI SK+   + +G++ LT      + T  +++R R    ++A+  H  +Q+  F +  + R+
Subjt:  NQLSPRNHISLRHFIEHLPPTTQEPTFHIHINHRITNIQIRSKSPNQNRVGVHLLTQIQIKNSPTSFKKRRKRKRNRTDAIPPHSRIQVNRFRQGSLKRI

Query:  PTNHGSPKKGVG
         ++H  P+  +G
Subjt:  PTNHGSPKKGVG

RDX75698.1 hypothetical protein CR513_44389, partial [Mucuna pruriens]3.5e-0632.37Show/hide
Query:  TQLCTGRDDTNQCNFIGVHTYVLHFLKILQCLLWSSILGITSDHCRPCHHILQRQFIKQVTSRFHIPKLRIRNNQLSPRNHISLRHFIEHLPPTTQEPTF
        TQL   R   NQ  FI +H +  H  K  Q L+  +IL IT    RP ++IL+ + IKQ     H+ +L I  N    RN+I LRH I+H       P  
Subjt:  TQLCTGRDDTNQCNFIGVHTYVLHFLKILQCLLWSSILGITSDHCRPCHHILQRQFIKQVTSRFHIPKLRIRNNQLSPRNHISLRHFIEHLPPTTQEPTF

Query:  HIHINHRITNIQIRSKSPNQNRVGVHLLTQIQIKNSPTS
        H   +H +    I  +   ++ +G+H +++  I N  +S
Subjt:  HIHINHRITNIQIRSKSPNQNRVGVHLLTQIQIKNSPTS

RID77250.1 hypothetical protein BRARA_A00178 [Brassica rapa]1.1e-0438.04Show/hide
Query:  LGITSDHCRPCHHILQRQFIKQVTSRFHIPKLRIRNNQLSPRNHISLRHFIEHLPPTTQEPTFHIHINHRITNIQIRSKSPNQNRVGVHLLT
        L I  +H RP   I  R FI+ +      P LR+  +   PR HIS+RHF+EHLP   Q P F +H +  + +    +K P    V +HLLT
Subjt:  LGITSDHCRPCHHILQRQFIKQVTSRFHIPKLRIRNNQLSPRNHISLRHFIEHLPPTTQEPTFHIHINHRITNIQIRSKSPNQNRVGVHLLT

TrEMBL top hitse value%identityAlignment
A0A2P2Q334 Uncharacterized protein4.6e-2041.78Show/hide
Query:  INHRITNIQIRSKSPNQNRVGVHLLTQIQIKNSPTSFKKRRKRKRNRTDAIPPHSRIQVNRFRQGSLKRIPTNHGSPKKGVGVFNLSKNQTWVGI-HRDI
        +N+RI N+QI +K  NQNR+ +HLL Q  I++  T  K RRKRKRNR  A+  H ++Q N F +  L R+  N G  KKGV   +  +N T VG+ H D+
Subjt:  INHRITNIQIRSKSPNQNRVGVHLLTQIQIKNSPTSFKKRRKRKRNRTDAIPPHSRIQVNRFRQGSLKRIPTNHGSPKKGVGVFNLSKNQTWVGI-HRDI

Query:  YPREHADEFGEDVRALTQSVADDMAVDLLDLRKDRAVVKNTYKSPF
           E  D+ G+DV AL +++ +D++VDLLDL    A ++   +  F
Subjt:  YPREHADEFGEDVRALTQSVADDMAVDLLDLRKDRAVVKNTYKSPF

A0A371FBM5 Uncharacterized protein (Fragment)1.7e-0632.37Show/hide
Query:  TQLCTGRDDTNQCNFIGVHTYVLHFLKILQCLLWSSILGITSDHCRPCHHILQRQFIKQVTSRFHIPKLRIRNNQLSPRNHISLRHFIEHLPPTTQEPTF
        TQL   R   NQ  FI +H +  H  K  Q L+  +IL IT    RP ++IL+ + IKQ     H+ +L I  N    RN+I LRH I+H       P  
Subjt:  TQLCTGRDDTNQCNFIGVHTYVLHFLKILQCLLWSSILGITSDHCRPCHHILQRQFIKQVTSRFHIPKLRIRNNQLSPRNHISLRHFIEHLPPTTQEPTF

Query:  HIHINHRITNIQIRSKSPNQNRVGVHLLTQIQIKNSPTS
        H   +H +    I  +   ++ +G+H +++  I N  +S
Subjt:  HIHINHRITNIQIRSKSPNQNRVGVHLLTQIQIKNSPTS

A0A398ANN9 Uncharacterized protein5.5e-0538.04Show/hide
Query:  LGITSDHCRPCHHILQRQFIKQVTSRFHIPKLRIRNNQLSPRNHISLRHFIEHLPPTTQEPTFHIHINHRITNIQIRSKSPNQNRVGVHLLT
        L I  +H RP   I  R FI+ +      P LR+  +   PR HIS+RHF+EHLP   Q P F +H +  + +    +K P    V +HLLT
Subjt:  LGITSDHCRPCHHILQRQFIKQVTSRFHIPKLRIRNNQLSPRNHISLRHFIEHLPPTTQEPTFHIHINHRITNIQIRSKSPNQNRVGVHLLT

A0A3Q7INU8 Uncharacterized protein3.5e-0450Show/hide
Query:  LRIRNNQLSPRNHISLRHFIEHLPPTTQEPTFHIHINHRITNIQIRSKSPNQNRVGVHLLTQIQ
        LRI +NQ SPRNHISLRHFI+HLP  T   T  +HIN R+    I +K P    V ++  T  Q
Subjt:  LRIRNNQLSPRNHISLRHFIEHLPPTTQEPTFHIHINHRITNIQIRSKSPNQNRVGVHLLTQIQ

A0A5A7R720 Type I restriction-modification systemmethyltransferase subunit2.7e-0433.33Show/hide
Query:  KILQCLLWSSILGITSDHCRPCHHILQRQFIKQVTSR----FHIPKLRIRNNQLSPRNHISLRHFIEHLPPTTQEPTFHIHINHRITNIQIRSKSPNQNR
        K+L   L  S +    +H R    +  + F K+V         +P L I     +PR+H+ L HF+EH+P  TQ P F IHI+HR  ++   ++ PN +R
Subjt:  KILQCLLWSSILGITSDHCRPCHHILQRQFIKQVTSR----FHIPKLRIRNNQLSPRNHISLRHFIEHLPPTTQEPTFHIHINHRITNIQIRSKSPNQNR

Query:  VGVHLLTQIQIKNSPTSFKKRRK
          VH LTQ  I      F   R+
Subjt:  VGVHLLTQIQIKNSPTSFKKRRK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATTGCACAAGGCAGAGTGCTCCTCAACTATGGTTTTCTTCCACCAAGGAATCAGCCAAGAAGGAATCAGTTGAGAATGAGAAGACTGTTAATGAGAAAACAGGATC
ACCAAAAGTTACCACAAGAACAAGTCCCGTTGTGGAAGTGATGAAATCTCATGTTATCCCTTATAATGATCTCCCTTCCAGTGATCTCAGATGCAGCACACATGACATTG
TGGCAATCCTCGCATATCCTAAGCATCAGTACATAGCAATCCATATGCCAATGCAAGCTTTTCACTATGACTCATCAGTATTCGCTCCTTTTCATCATCACTCATATCAT
AAGGCACAGATCTCAAGATTCCCATGGATGCGGCAAGCTCCAAGCAGTGCTCCCCATACACCTCCGTGGGGTTCCATTGACATGGTTTCGATGAGCTCGATTAGCATATT
TAACTGCACCCAACTGTGCACAGGCCGAGATGACACCAACCAGTGTAACTTCATCGGTGTCCATACCTACGTCCTGCATTTTTTGAAAATACTCCAATGCCTCCTTTGGT
CTAGCATTTTGGGCATAACCAGTGACCATTGCCGTCCATGCCACCATATCCTTCAAAGGCAATTCATCAAACAGGTCACCAGCAGATTCCATATCCCCAAACTTCGCATA
CGCAACAATCAGCTCAGTCCAAGAAACCACATCTCTCTCAGACATTTCATCGAACACCTTCCGCCCACAACCCAAGAACCCACATTTCACATACATATCAATCATCGTAT
TACCAACATACAAATCAGAAGCAAATCCCCCAATCAAAATCGTGTGGGCGTGCACCTGCTTACCCAAATCCAGATTAAGAACAGCCCCACAAGCTTTAAAAAGCGCCGAA
AACGTAAACGAAACAGGACTGACGCCATCCCTCCTCATTCTCGTATACAAGTTAATAGATTCAGACAAGGGTCCTTGAAGCGCATACCCACGAATCATGGCAGTCCAAAG
AAAGGGGTTGGGGTATTTAACCTGTCCAAAAACCAGACGTGGGTAGGAATCCATCGGGACATCTACCCTCGTGAGCATGCGGATGAGTTTGGTGAGGACGTAAGAGCATT
GACTCAATCCGTTGCGGACGATATGGCCGTGGACTTGCTTGATTTGAGAAAAGACCGTGCAGTCGTGAAGAATACTTATAAGTCGCCATTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTATTGCACAAGGCAGAGTGCTCCTCAACTATGGTTTTCTTCCACCAAGGAATCAGCCAAGAAGGAATCAGTTGAGAATGAGAAGACTGTTAATGAGAAAACAGGATC
ACCAAAAGTTACCACAAGAACAAGTCCCGTTGTGGAAGTGATGAAATCTCATGTTATCCCTTATAATGATCTCCCTTCCAGTGATCTCAGATGCAGCACACATGACATTG
TGGCAATCCTCGCATATCCTAAGCATCAGTACATAGCAATCCATATGCCAATGCAAGCTTTTCACTATGACTCATCAGTATTCGCTCCTTTTCATCATCACTCATATCAT
AAGGCACAGATCTCAAGATTCCCATGGATGCGGCAAGCTCCAAGCAGTGCTCCCCATACACCTCCGTGGGGTTCCATTGACATGGTTTCGATGAGCTCGATTAGCATATT
TAACTGCACCCAACTGTGCACAGGCCGAGATGACACCAACCAGTGTAACTTCATCGGTGTCCATACCTACGTCCTGCATTTTTTGAAAATACTCCAATGCCTCCTTTGGT
CTAGCATTTTGGGCATAACCAGTGACCATTGCCGTCCATGCCACCATATCCTTCAAAGGCAATTCATCAAACAGGTCACCAGCAGATTCCATATCCCCAAACTTCGCATA
CGCAACAATCAGCTCAGTCCAAGAAACCACATCTCTCTCAGACATTTCATCGAACACCTTCCGCCCACAACCCAAGAACCCACATTTCACATACATATCAATCATCGTAT
TACCAACATACAAATCAGAAGCAAATCCCCCAATCAAAATCGTGTGGGCGTGCACCTGCTTACCCAAATCCAGATTAAGAACAGCCCCACAAGCTTTAAAAAGCGCCGAA
AACGTAAACGAAACAGGACTGACGCCATCCCTCCTCATTCTCGTATACAAGTTAATAGATTCAGACAAGGGTCCTTGAAGCGCATACCCACGAATCATGGCAGTCCAAAG
AAAGGGGTTGGGGTATTTAACCTGTCCAAAAACCAGACGTGGGTAGGAATCCATCGGGACATCTACCCTCGTGAGCATGCGGATGAGTTTGGTGAGGACGTAAGAGCATT
GACTCAATCCGTTGCGGACGATATGGCCGTGGACTTGCTTGATTTGAGAAAAGACCGTGCAGTCGTGAAGAATACTTATAAGTCGCCATTCTAA
Protein sequenceShow/hide protein sequence
MYCTRQSAPQLWFSSTKESAKKESVENEKTVNEKTGSPKVTTRTSPVVEVMKSHVIPYNDLPSSDLRCSTHDIVAILAYPKHQYIAIHMPMQAFHYDSSVFAPFHHHSYH
KAQISRFPWMRQAPSSAPHTPPWGSIDMVSMSSISIFNCTQLCTGRDDTNQCNFIGVHTYVLHFLKILQCLLWSSILGITSDHCRPCHHILQRQFIKQVTSRFHIPKLRI
RNNQLSPRNHISLRHFIEHLPPTTQEPTFHIHINHRITNIQIRSKSPNQNRVGVHLLTQIQIKNSPTSFKKRRKRKRNRTDAIPPHSRIQVNRFRQGSLKRIPTNHGSPK
KGVGVFNLSKNQTWVGIHRDIYPREHADEFGEDVRALTQSVADDMAVDLLDLRKDRAVVKNTYKSPF