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Lsi07G002420 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G002420
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionDehydrin DHN1
Genome locationchr07:2652684..2653807
RNA-Seq ExpressionLsi07G002420
SyntenyLsi07G002420
Gene Ontology termsGO:0009414 - response to water deprivation (biological process)
GO:0009631 - cold acclimation (biological process)
GO:0009737 - response to abscisic acid (biological process)
InterPro domainsIPR000167 - Dehydrin
IPR030513 - Dehydrin, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044784.1 dehydrin DHN1 [Cucumis melo var. makuwa]4.5e-2867.62Show/hide
Query:  AHYQNHYCAQSGTDHYGYPIRQTDEHGNVISETSQYADTLHQTDEFRETNQYGYPIHRSDEQQQGGIFHHDKAVTTTTTTERDGGHHEKKGIMEKIKEKL
        AHYQN Y AQ+G+D YGYPIRQTDE+GNVISET QY DTL +TDE     QY  P H S++QQ  GI H++K V  T TTE   GHHEKKGI+EKIKEKL
Subjt:  AHYQNHYCAQSGTDHYGYPIRQTDEHGNVISETSQYADTLHQTDEFRETNQYGYPIHRSDEQQQGGIFHHDKAVTTTTTTERDGGHHEKKGIMEKIKEKL

Query:  PGGHH
        PGGHH
Subjt:  PGGHH

KAE8649181.1 hypothetical protein Csa_015017 [Cucumis sativus]1.2e-2865.42Show/hide
Query:  KKAHYQNHYCAQSGTDHYGYPIRQTDEHGNVISETSQYADTLHQTDEFRETNQYGYPIHRSDEQQQGGIFHHDKAVTTTTTTERDGGHHEKKGIMEKIKE
        K AHYQN Y AQ+G+D YGYPIRQTDE+ NVISET QY DTL +TD+     QY  PIH S++QQ  GIFH++K V  T T E   GHHEKKG++EKIKE
Subjt:  KKAHYQNHYCAQSGTDHYGYPIRQTDEHGNVISETSQYADTLHQTDEFRETNQYGYPIHRSDEQQQGGIFHHDKAVTTTTTTERDGGHHEKKGIMEKIKE

Query:  KLPGGHH
        KLPGGHH
Subjt:  KLPGGHH

KAG6577230.1 hypothetical protein SDJN03_24804, partial [Cucurbita argyrosperma subsp. sororia]1.3e-2756.15Show/hide
Query:  AHYQNHYCAQSGTDHYGYPIRQTDEHGNVISETSQYADTLHQTDEFRETNQYGYPIHRSD----------------------EQQQGGIFHHDKAVTT--
        AHYQN Y AQSG D YG PIRQTDE+GNVIS+T+Q+ D L +TDEFR T+QYG PIHR+D                      +QQ+GG+FHHDK V+T  
Subjt:  AHYQNHYCAQSGTDHYGYPIRQTDEHGNVISETSQYADTLHQTDEFRETNQYGYPIHRSD----------------------EQQQGGIFHHDKAVTT--

Query:  --TTTTERDGGHHEKKGIMEKIKEKLPGGH
            TT   G  HEKKG+MEKIKEKLPGG+
Subjt:  --TTTTERDGGHHEKKGIMEKIKEKLPGGH

XP_022929430.1 dehydrin DHN1-like [Cucurbita moschata]1.7e-2755.73Show/hide
Query:  AHYQNHYCAQSGTDHYGYPIRQTDEHGNVISETSQYADTLHQTDEFRETNQYGYPIHRSD-----------------------EQQQGGIFHHDKAVTT-
        AHYQN Y AQSG D YG PIRQTDE+GNVIS+T+Q+ D L +TDEFR T+QYG PIHR+D                       +QQ+GG+FHHDK V+T 
Subjt:  AHYQNHYCAQSGTDHYGYPIRQTDEHGNVISETSQYADTLHQTDEFRETNQYGYPIHRSD-----------------------EQQQGGIFHHDKAVTT-

Query:  ---TTTTERDGGHHEKKGIMEKIKEKLPGGH
             TT   G  HEKKG+MEKIKEKLPGG+
Subjt:  ---TTTTERDGGHHEKKGIMEKIKEKLPGGH

XP_038888416.1 dehydrin Xero 1-like [Benincasa hispida]4.0e-4081.9Show/hide
Query:  AHYQNHYCAQSGTDHYGYPIRQTDEHGNVISETSQYADTLHQTDEFRETNQYGYPIHRSDEQQQGGIFHHDKAVTTTTTTERDGGHHEKKGIMEKIKEKL
        AHYQN Y A+SGTD YGYPIRQTDE+GNVISE+ QYADT H+TDEFRET+QYG PI RSDEQQQGGIFHHDK V TTT  E+ G HHEKKGIMEKIKEKL
Subjt:  AHYQNHYCAQSGTDHYGYPIRQTDEHGNVISETSQYADTLHQTDEFRETNQYGYPIHRSDEQQQGGIFHHDKAVTTTTTTERDGGHHEKKGIMEKIKEKL

Query:  PGGHH
        PGGHH
Subjt:  PGGHH

TrEMBL top hitse value%identityAlignment
A0A0A0KUH6 Uncharacterized protein1.7e-2865.71Show/hide
Query:  AHYQNHYCAQSGTDHYGYPIRQTDEHGNVISETSQYADTLHQTDEFRETNQYGYPIHRSDEQQQGGIFHHDKAVTTTTTTERDGGHHEKKGIMEKIKEKL
        AHYQN Y AQ+G+D YGYPIRQTDE+ NVISET QY DTL +TD+     QY  PIH S++QQ  GIFH++K V  T T E   GHHEKKG++EKIKEKL
Subjt:  AHYQNHYCAQSGTDHYGYPIRQTDEHGNVISETSQYADTLHQTDEFRETNQYGYPIHRSDEQQQGGIFHHDKAVTTTTTTERDGGHHEKKGIMEKIKEKL

Query:  PGGHH
        PGGHH
Subjt:  PGGHH

A0A5D3CXL0 Dehydrin DHN12.2e-2867.62Show/hide
Query:  AHYQNHYCAQSGTDHYGYPIRQTDEHGNVISETSQYADTLHQTDEFRETNQYGYPIHRSDEQQQGGIFHHDKAVTTTTTTERDGGHHEKKGIMEKIKEKL
        AHYQN Y AQ+G+D YGYPIRQTDE+GNVISET QY DTL +TDE     QY  P H S++QQ  GI H++K V  T TTE   GHHEKKGI+EKIKEKL
Subjt:  AHYQNHYCAQSGTDHYGYPIRQTDEHGNVISETSQYADTLHQTDEFRETNQYGYPIHRSDEQQQGGIFHHDKAVTTTTTTERDGGHHEKKGIMEKIKEKL

Query:  PGGHH
        PGGHH
Subjt:  PGGHH

A0A6J1C526 dehydrin DHN1-like1.2e-2153.72Show/hide
Query:  AHYQNHYCAQSGTDHYGYPIRQTDEHGNVISETSQYADTLHQTDEFRETNQYGY--------------PIHRSDEQQQGGIFHHD--KAVTTTTTTERDG
        AHYQN Y  QSGTD YG PIRQTDE+GNVI E+ Q+ D L +T E R+T+ YG                 HR  +Q Q G+FHHD  +A TT  T    G
Subjt:  AHYQNHYCAQSGTDHYGYPIRQTDEHGNVISETSQYADTLHQTDEFRETNQYGY--------------PIHRSDEQQQGGIFHHD--KAVTTTTTTERDG

Query:  GHHEKKGIMEKIKEKLPGGHH
        G  EKKG+MEKIKEKLPG HH
Subjt:  GHHEKKGIMEKIKEKLPGGHH

A0A6J1C5G3 dehydrin Xero 1-like2.4e-1948.15Show/hide
Query:  AHYQNHYCAQSGTDHYGYPIRQTDEHGNVISET--SQYADTLHQTDEFRETNQYGYPIHRSDE-------------------QQQGGIFHHDK-------
        AHYQN Y AQSGTD YG PIR+TDE+GNVIS+T   QY D LH+TDEFR+T+QYG P+ R+DE                      GG  H  K       
Subjt:  AHYQNHYCAQSGTDHYGYPIRQTDEHGNVISET--SQYADTLHQTDEFRETNQYGYPIHRSDE-------------------QQQGGIFHHDK-------

Query:  --AVTTTTTTERDG-GHHEKKGIMEKIKEKLPGGH
            ++++++E DG G   KKG+ EKIKEKLPG H
Subjt:  --AVTTTTTTERDG-GHHEKKGIMEKIKEKLPGGH

A0A6J1EUD8 dehydrin DHN1-like8.3e-2855.73Show/hide
Query:  AHYQNHYCAQSGTDHYGYPIRQTDEHGNVISETSQYADTLHQTDEFRETNQYGYPIHRSD-----------------------EQQQGGIFHHDKAVTT-
        AHYQN Y AQSG D YG PIRQTDE+GNVIS+T+Q+ D L +TDEFR T+QYG PIHR+D                       +QQ+GG+FHHDK V+T 
Subjt:  AHYQNHYCAQSGTDHYGYPIRQTDEHGNVISETSQYADTLHQTDEFRETNQYGYPIHRSD-----------------------EQQQGGIFHHDKAVTT-

Query:  ---TTTTERDGGHHEKKGIMEKIKEKLPGGH
             TT   G  HEKKG+MEKIKEKLPGG+
Subjt:  ---TTTTERDGGHHEKKGIMEKIKEKLPGGH

SwissProt top hitse value%identityAlignment
A2ZDX6 Dehydrin Rab16C8.1e-0450Show/hide
Query:  DEQQQGGIFHHDKAVTTTTTTERDG-GHHEKKGIMEKIKEKLPGGH
        +E + GGI H   + ++++++E DG G   KKGI EKIKEKLPGG+
Subjt:  DEQQQGGIFHHDKAVTTTTTTERDG-GHHEKKGIMEKIKEKLPGGH

P09442 Late embryogenesis abundant protein D-112.8e-0431.73Show/hide
Query:  AHYQNHYCAQ--SGTDHYGYPIRQTDEHGNVISETSQYADTLHQTDEFRETNQYGYPIHRSDEQQQGGIFHHDKAVTTTTTTERDGGHHEKKGIMEKIKE
        AH+QN Y A   + TD YG P R+TDE+GN I                +ET +    I         G+     + ++++++E +G   +KKG+ E++KE
Subjt:  AHYQNHYCAQ--SGTDHYGYPIRQTDEHGNVISETSQYADTLHQTDEFRETNQYGYPIHRSDEQQQGGIFHHDKAVTTTTTTERDGGHHEKKGIMEKIKE

Query:  KLPG
        K+PG
Subjt:  KLPG

P22238 Desiccation-related protein clone PCC27-041.6e-0456.82Show/hide
Query:  EQQQGGIFHHDKAVTTTTTTERDGGHHEKKGIMEKIKEKLPGGH
        E+  GG          TTTT   GGH EKKG+MEKIKEKLPG H
Subjt:  EQQQGGIFHHDKAVTTTTTTERDGGHHEKKGIMEKIKEKLPGGH

P25863 Dehydrin Xero 16.6e-0666.67Show/hide
Query:  HHDKAVTT---TTTTERDGG--HHEKKGIMEKIKEKLPGGHH
        HHD   T+   +TTT  D G  HHEKKG+MEKIKEKLPGGHH
Subjt:  HHDKAVTT---TTTTERDGG--HHEKKGIMEKIKEKLPGGHH

Q2R4Z7 Dehydrin Rab16C8.1e-0450Show/hide
Query:  DEQQQGGIFHHDKAVTTTTTTERDG-GHHEKKGIMEKIKEKLPGGH
        +E + GGI H   + ++++++E DG G   KKGI EKIKEKLPGG+
Subjt:  DEQQQGGIFHHDKAVTTTTTTERDG-GHHEKKGIMEKIKEKLPGGH

Arabidopsis top hitse value%identityAlignment
AT3G50970.1 dehydrin family protein7.5e-0558.97Show/hide
Query:  HHDKAVTTTTTTERDGG--HHEKKGIMEKIKEKLPGGHH
        HH    T TTT+  + G  HHE K  M+KIKEKLPGGHH
Subjt:  HHDKAVTTTTTTERDGG--HHEKKGIMEKIKEKLPGGHH

AT3G50980.1 dehydrin xero 14.7e-0766.67Show/hide
Query:  HHDKAVTT---TTTTERDGG--HHEKKGIMEKIKEKLPGGHH
        HHD   T+   +TTT  D G  HHEKKG+MEKIKEKLPGGHH
Subjt:  HHDKAVTT---TTTTERDGG--HHEKKGIMEKIKEKLPGGHH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGTTTTGCAAGAAGGCACATTACCAAAACCATTACTGTGCACAATCTGGAACCGACCACTACGGCTACCCAATTCGCCAGACCGATGAACACGGCAATGTCATCTC
CGAGACCAGTCAATATGCCGACACTCTCCACCAGACCGACGAATTCCGTGAGACCAACCAGTATGGCTACCCGATTCATCGAAGCGACGAGCAGCAGCAGGGTGGAATAT
TTCATCACGATAAGGCGGTGACGACGACCACGACGACGGAGAGAGACGGTGGGCATCATGAGAAGAAGGGGATAATGGAGAAGATCAAGGAGAAGCTGCCGGGAGGACAC
CATTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAGTTTTGCAAGAAGGCACATTACCAAAACCATTACTGTGCACAATCTGGAACCGACCACTACGGCTACCCAATTCGCCAGACCGATGAACACGGCAATGTCATCTC
CGAGACCAGTCAATATGCCGACACTCTCCACCAGACCGACGAATTCCGTGAGACCAACCAGTATGGCTACCCGATTCATCGAAGCGACGAGCAGCAGCAGGGTGGAATAT
TTCATCACGATAAGGCGGTGACGACGACCACGACGACGGAGAGAGACGGTGGGCATCATGAGAAGAAGGGGATAATGGAGAAGATCAAGGAGAAGCTGCCGGGAGGACAC
CATTGA
Protein sequenceShow/hide protein sequence
MQFCKKAHYQNHYCAQSGTDHYGYPIRQTDEHGNVISETSQYADTLHQTDEFRETNQYGYPIHRSDEQQQGGIFHHDKAVTTTTTTERDGGHHEKKGIMEKIKEKLPGGH
H