CuGenDBv2

Gene ID	Lsi07G002630
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	GDP-mannose 4,6 dehydratase 1-like
Genome location	chr07:2857260..2863124
RNA-Seq Expression	Lsi07G002630
Synteny	Lsi07G002630
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0044809.1 uncharacterized protein E6C27_scaffold74G001000 [Cucumis melo var. makuwa]

3.2e-91

89.67

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Query:  MGASESALSRSQSARPADVISTVSERSEAVDPILERLKSLQITTPILQSPPTEGSLTDILVAKECITS-SFTVDPQVLLELFSIYRNWQDEKVQEINKNQ
        MGASESALSRS S R ADVISTVSERSEAVDPILERLKSLQITTPILQSPPTEGSLTDILV K   +S + TV+PQVLLELFSIYR WQDEKVQEINKNQ
Subjt:  MGASESALSRSQSARPADVISTVSERSEAVDPILERLKSLQITTPILQSPPTEGSLTDILVAKECITS-SFTVDPQVLLELFSIYRNWQDEKVQEINKNQ

Query:  EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLSEVHSLEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPFVVATADSGSSCNTSSEQVA
        EDIENKIEV DALAVKLLQRLNFSVSAVKSASQHLS VHSLEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPFV+ATAD+GSSCN+SS+QVA
Subjt:  EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLSEVHSLEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPFVVATADSGSSCNTSSEQVA

Query:  LNTDPHLQEPKLD
        L+TDPH QEPKL+
Subjt:  LNTDPHLQEPKLD

XP_004146513.1 uncharacterized protein LOC101208248 [Cucumis sativus]

3.8e-92

90.61

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Query:  MGASESALSRSQSARPADVISTVSERSEAVDPILERLKSLQITTPILQSPPTEGSLTDILVAKECITS-SFTVDPQVLLELFSIYRNWQDEKVQEINKNQ
        MGASESALSRS SAR ADVISTVSERSEAVDPILE LKSLQITTPILQSPPTEGSLTDILV K   +S + TV+PQVLLELFSIYR WQD KVQEINKNQ
Subjt:  MGASESALSRSQSARPADVISTVSERSEAVDPILERLKSLQITTPILQSPPTEGSLTDILVAKECITS-SFTVDPQVLLELFSIYRNWQDEKVQEINKNQ

Query:  EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLSEVHSLEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPFVVATADSGSSCNTSSEQVA
        EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLSEVHSLEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPFV+ATAD+GSSCN+SSEQVA
Subjt:  EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLSEVHSLEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPFVVATADSGSSCNTSSEQVA

Query:  LNTDPHLQEPKLD
        LNTDPH  EPKL+
Subjt:  LNTDPHLQEPKLD

XP_008452067.1 PREDICTED: uncharacterized protein LOC103493183 [Cucumis melo]

1.3e-92

90.61

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Query:  MGASESALSRSQSARPADVISTVSERSEAVDPILERLKSLQITTPILQSPPTEGSLTDILVAKECITS-SFTVDPQVLLELFSIYRNWQDEKVQEINKNQ
        MGASESALSRS S R ADVISTVSERSEAVDPILERLKSLQITTPILQSPPTEGSLTDILV K   +S + TV+PQVLLELFSIYR WQDEKVQEINKNQ
Subjt:  MGASESALSRSQSARPADVISTVSERSEAVDPILERLKSLQITTPILQSPPTEGSLTDILVAKECITS-SFTVDPQVLLELFSIYRNWQDEKVQEINKNQ

Query:  EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLSEVHSLEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPFVVATADSGSSCNTSSEQVA
        EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLSEVHSLEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPFV+ATAD+GSSCN+SS+QVA
Subjt:  EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLSEVHSLEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPFVVATADSGSSCNTSSEQVA

Query:  LNTDPHLQEPKLD
        L+TDPH QEPKL+
Subjt:  LNTDPHLQEPKLD

XP_022942738.1 uncharacterized protein LOC111447685 [Cucurbita moschata]

5.2e-89

85.85

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Query:  MGASESALSRSQSARPADVISTVSERSEAVDPILERLKSLQITTPILQSPPTEGSLTDILVAKECITS-SFTVDPQVLLELFSIYRNWQDEKVQEINKNQ
        MGASES+LS SQ ARPADVISTVSERSEAVDPILERLKSL+ITTPILQSPPTEGSLTDILV K   +S + TV+PQVLLELFS+YRNWQDE+VQ+INKNQ
Subjt:  MGASESALSRSQSARPADVISTVSERSEAVDPILERLKSLQITTPILQSPPTEGSLTDILVAKECITS-SFTVDPQVLLELFSIYRNWQDEKVQEINKNQ

Query:  EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLSEVHSLEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPFVVATADSGSSCNTSSEQVA
        EDIENKIEVTDALAVKLLQRLNFSVSAVK+AS+HLSEVH+L+VEIGELKGRLTEVISNCDA+C+RI+SEGPESLR SIKPFVVAT DSGSSCN+SS+QV 
Subjt:  EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLSEVHSLEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPFVVATADSGSSCNTSSEQVA

Query:  LNTDPHLQEPKL
        LNT+PH QEPKL
Subjt:  LNTDPHLQEPKL

XP_038891870.1 uncharacterized protein LOC120081229 [Benincasa hispida]

2.9e-92

91.12

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Query:  MGASESALSRSQSARPADVISTVSERSEAVDPILERLKSLQITTPILQSPPTEGSLTDILVAKECITS-SFTVDPQVLLELFSIYRNWQDEKVQEINKNQ
        MGASESALSRSQSARPADVISTVSERSEA DPILERL SLQITTPILQ+PP EGSLTDILV K   +S + TV+PQVLLELFSIYR WQDEKVQEINKNQ
Subjt:  MGASESALSRSQSARPADVISTVSERSEAVDPILERLKSLQITTPILQSPPTEGSLTDILVAKECITS-SFTVDPQVLLELFSIYRNWQDEKVQEINKNQ

Query:  EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLSEVHSLEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPFVVATADSGSSCNTSSEQV-
        EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLSEVHSLEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPFVVATADSGSSCN+SSEQV 
Subjt:  EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLSEVHSLEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPFVVATADSGSSCNTSSEQV-

Query:  ALNTDPHLQEPKLD
        ALNT+ H QEPKLD
Subjt:  ALNTDPHLQEPKLD

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KUT6 Uncharacterized protein

1.8e-92

90.61

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Query:  MGASESALSRSQSARPADVISTVSERSEAVDPILERLKSLQITTPILQSPPTEGSLTDILVAKECITS-SFTVDPQVLLELFSIYRNWQDEKVQEINKNQ
        MGASESALSRS SAR ADVISTVSERSEAVDPILE LKSLQITTPILQSPPTEGSLTDILV K   +S + TV+PQVLLELFSIYR WQD KVQEINKNQ
Subjt:  MGASESALSRSQSARPADVISTVSERSEAVDPILERLKSLQITTPILQSPPTEGSLTDILVAKECITS-SFTVDPQVLLELFSIYRNWQDEKVQEINKNQ

Query:  EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLSEVHSLEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPFVVATADSGSSCNTSSEQVA
        EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLSEVHSLEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPFV+ATAD+GSSCN+SSEQVA
Subjt:  EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLSEVHSLEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPFVVATADSGSSCNTSSEQVA

Query:  LNTDPHLQEPKLD
        LNTDPH  EPKL+
Subjt:  LNTDPHLQEPKLD

A0A1S3BSD9 uncharacterized protein LOC103493183

6.3e-93

90.61

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Query:  MGASESALSRSQSARPADVISTVSERSEAVDPILERLKSLQITTPILQSPPTEGSLTDILVAKECITS-SFTVDPQVLLELFSIYRNWQDEKVQEINKNQ
        MGASESALSRS S R ADVISTVSERSEAVDPILERLKSLQITTPILQSPPTEGSLTDILV K   +S + TV+PQVLLELFSIYR WQDEKVQEINKNQ
Subjt:  MGASESALSRSQSARPADVISTVSERSEAVDPILERLKSLQITTPILQSPPTEGSLTDILVAKECITS-SFTVDPQVLLELFSIYRNWQDEKVQEINKNQ

Query:  EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLSEVHSLEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPFVVATADSGSSCNTSSEQVA
        EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLSEVHSLEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPFV+ATAD+GSSCN+SS+QVA
Subjt:  EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLSEVHSLEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPFVVATADSGSSCNTSSEQVA

Query:  LNTDPHLQEPKLD
        L+TDPH QEPKL+
Subjt:  LNTDPHLQEPKLD

A0A5A7TU92 Uncharacterized protein

1.6e-91

89.67

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Query:  MGASESALSRSQSARPADVISTVSERSEAVDPILERLKSLQITTPILQSPPTEGSLTDILVAKECITS-SFTVDPQVLLELFSIYRNWQDEKVQEINKNQ
        MGASESALSRS S R ADVISTVSERSEAVDPILERLKSLQITTPILQSPPTEGSLTDILV K   +S + TV+PQVLLELFSIYR WQDEKVQEINKNQ
Subjt:  MGASESALSRSQSARPADVISTVSERSEAVDPILERLKSLQITTPILQSPPTEGSLTDILVAKECITS-SFTVDPQVLLELFSIYRNWQDEKVQEINKNQ

Query:  EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLSEVHSLEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPFVVATADSGSSCNTSSEQVA
        EDIENKIEV DALAVKLLQRLNFSVSAVKSASQHLS VHSLEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPFV+ATAD+GSSCN+SS+QVA
Subjt:  EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLSEVHSLEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPFVVATADSGSSCNTSSEQVA

Query:  LNTDPHLQEPKLD
        L+TDPH QEPKL+
Subjt:  LNTDPHLQEPKLD

A0A5D3CYS3 Uncharacterized protein

6.3e-93

90.61

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Query:  MGASESALSRSQSARPADVISTVSERSEAVDPILERLKSLQITTPILQSPPTEGSLTDILVAKECITS-SFTVDPQVLLELFSIYRNWQDEKVQEINKNQ
        MGASESALSRS S R ADVISTVSERSEAVDPILERLKSLQITTPILQSPPTEGSLTDILV K   +S + TV+PQVLLELFSIYR WQDEKVQEINKNQ
Subjt:  MGASESALSRSQSARPADVISTVSERSEAVDPILERLKSLQITTPILQSPPTEGSLTDILVAKECITS-SFTVDPQVLLELFSIYRNWQDEKVQEINKNQ

Query:  EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLSEVHSLEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPFVVATADSGSSCNTSSEQVA
        EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLSEVHSLEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPFV+ATAD+GSSCN+SS+QVA
Subjt:  EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLSEVHSLEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPFVVATADSGSSCNTSSEQVA

Query:  LNTDPHLQEPKLD
        L+TDPH QEPKL+
Subjt:  LNTDPHLQEPKLD

A0A6J1FVK8 uncharacterized protein LOC111447685

2.5e-89

85.85

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Query:  MGASESALSRSQSARPADVISTVSERSEAVDPILERLKSLQITTPILQSPPTEGSLTDILVAKECITS-SFTVDPQVLLELFSIYRNWQDEKVQEINKNQ
        MGASES+LS SQ ARPADVISTVSERSEAVDPILERLKSL+ITTPILQSPPTEGSLTDILV K   +S + TV+PQVLLELFS+YRNWQDE+VQ+INKNQ
Subjt:  MGASESALSRSQSARPADVISTVSERSEAVDPILERLKSLQITTPILQSPPTEGSLTDILVAKECITS-SFTVDPQVLLELFSIYRNWQDEKVQEINKNQ

Query:  EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLSEVHSLEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPFVVATADSGSSCNTSSEQVA
        EDIENKIEVTDALAVKLLQRLNFSVSAVK+AS+HLSEVH+L+VEIGELKGRLTEVISNCDA+C+RI+SEGPESLR SIKPFVVAT DSGSSCN+SS+QV 
Subjt:  EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLSEVHSLEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPFVVATADSGSSCNTSSEQVA

Query:  LNTDPHLQEPKL
        LNT+PH QEPKL
Subjt:  LNTDPHLQEPKL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G66290.1 unknown protein

4.0e-63

67.35

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Query:  MGASESALSRSQSARPADVISTVSERSEAVDPILERLKSLQITTPILQSPPTEGSLTDILVAKECITSSF-TVDPQVLLELFSIYRNWQDEKVQEINKNQ
        MGAS+S L  SQ  R  DVI+T+S RSE VDPILE LK+L ++ PIL+SPPTE SLTDILV K   +SS  TVDPQ+L+ELFSIYR WQ+ K QEI K Q
Subjt:  MGASESALSRSQSARPADVISTVSERSEAVDPILERLKSLQITTPILQSPPTEGSLTDILVAKECITSSF-TVDPQVLLELFSIYRNWQDEKVQEINKNQ

Query:  EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLSEVHSLEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPFVVATADSGSSCNTSS
        EDIENKIEV DALA KLLQR N SVSA+++ +QHLS+VH L+VE+GELKGRLTEVISNCD LC+RI SEGPESLRS++ PF +A+ DS S   T++
Subjt:  EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLSEVHSLEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPFVVATADSGSSCNTSS

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGGGGCTTCAGAATCCGCACTCTCACGCTCTCAGTCAGCGAGGCCAGCTGATGTAATCTCCACCGTGTCGGAACGATCAGAAGCTGTTGATCCCATCTTGGAGAGGCT
CAAGTCCCTTCAAATTACAACACCGATATTGCAGTCACCCCCTACGGAAGGTAGCCTGACAGATATCTTAGTAGCTAAAGAGTGCATCACCTCCTCCTTTACTGTGGATC
CCCAAGTGCTTTTGGAGCTCTTCTCGATATACCGTAATTGGCAGGATGAAAAGGTCCAAGAGATCAACAAAAATCAGGAAGATATCGAGAACAAGATTGAAGTCACAGAT
GCTTTGGCTGTTAAACTTCTTCAACGCTTAAATTTTTCTGTTTCAGCAGTCAAGTCAGCGTCCCAACATCTGTCAGAAGTTCACTCACTGGAAGTGGAAATTGGTGAGCT
CAAGGGAAGATTGACAGAGGTTATTAGTAATTGCGATGCATTATGCAGAAGAATTGCTTCAGAGGGTCCAGAGTCTCTTCGGTCATCTATCAAGCCATTTGTTGTTGCTA
CGGCCGACTCGGGGTCTTCCTGCAACACATCATCTGAGCAAGTAGCTTTGAATACAGATCCACATCTCCAAGAACCCAAATTAGATTGA

mRNA sequence

Show/hide mRNA sequence

CCAAAACCAAATGGTTAGGAAGTACACCTAAACAGAATTAAGCGGTTTGAGCTTGAGCCGAAACCGATTTTCGGACTTAGTTGGGGGCCTTCGACTCCGCTGCGGTGGCT
TTTTCCATCCCCTTGGTTGCATCGGAGCTTTCACTGATCGGAAACTATCTCTGAGAGTCTACGGACATGGGGGCTTCAGAATCCGCACTCTCACGCTCTCAGTCAGCGAG
GCCAGCTGATGTAATCTCCACCGTGTCGGAACGATCAGAAGCTGTTGATCCCATCTTGGAGAGGCTCAAGTCCCTTCAAATTACAACACCGATATTGCAGTCACCCCCTA
CGGAAGGTAGCCTGACAGATATCTTAGTAGCTAAAGAGTGCATCACCTCCTCCTTTACTGTGGATCCCCAAGTGCTTTTGGAGCTCTTCTCGATATACCGTAATTGGCAG
GATGAAAAGGTCCAAGAGATCAACAAAAATCAGGAAGATATCGAGAACAAGATTGAAGTCACAGATGCTTTGGCTGTTAAACTTCTTCAACGCTTAAATTTTTCTGTTTC
AGCAGTCAAGTCAGCGTCCCAACATCTGTCAGAAGTTCACTCACTGGAAGTGGAAATTGGTGAGCTCAAGGGAAGATTGACAGAGGTTATTAGTAATTGCGATGCATTAT
GCAGAAGAATTGCTTCAGAGGGTCCAGAGTCTCTTCGGTCATCTATCAAGCCATTTGTTGTTGCTACGGCCGACTCGGGGTCTTCCTGCAACACATCATCTGAGCAAGTA
GCTTTGAATACAGATCCACATCTCCAAGAACCCAAATTAGATTGATTCATTGCTAGAAATCATTTTGTAATTCAGGAAACAAAGCACTCCATTGCTATAGATGCATTCAT
CCAGTGTCAAATTTGCTGTTTACAGCAAAATCAGGCTGTTAAGAAAAAAAAAAGCCCGAAAGCAGTGTTCCAAAATCTAGGAACGCTGACCATAATAGCCCTTTGAAAGG
AGTTGGCTCCCACTAAAATTGCCACCTGCCGATGCCGACCGGCCGCTCGGGCAGAGGCCACAGCACAGCTACATTAAGGACTTCTCTCTGGCCCTTTTGAAAGGAGTTTC
CCCACCGACGTAGCCTTCTCCTCTTGCTTGTTAAGATCCATCTTCTAGAGCCTGAAC

Protein sequence

Show/hide protein sequence

MGASESALSRSQSARPADVISTVSERSEAVDPILERLKSLQITTPILQSPPTEGSLTDILVAKECITSSFTVDPQVLLELFSIYRNWQDEKVQEINKNQEDIENKIEVTD
ALAVKLLQRLNFSVSAVKSASQHLSEVHSLEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPFVVATADSGSSCNTSSEQVALNTDPHLQEPKLD

Lsi07G002630 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome