; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi07G002760 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G002760
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionprotein SPIRAL1-like 5
Genome locationchr07:2991277..2992193
RNA-Seq ExpressionLsi07G002760
SyntenyLsi07G002760
Gene Ontology termsGO:0043622 - cortical microtubule organization (biological process)
GO:0010005 - cortical microtubule, transverse to long axis (cellular component)
InterPro domainsIPR039613 - Protein SPIRAL1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146520.1 protein SPIRAL1-like 5 [Cucumis sativus]2.1e-4183.04Show/hide
Query:  MSRGGSYGGGRSSLGYLFGKDDQPIKPQVTKVVLPPPYGIDLNPHDNSNNNPSPSPSSPSPSPSPSPKQLVS-NNYPRAHGQNSGNFITDRPSTKVKSVP
        MSRGGSYGGGRSSLGYLFGKDDQP KPQV+KVVLPPPYGIDLNP D++NN            PSPSPKQLVS NNYPRAHGQNSGNFITDRPSTKVKS P
Subjt:  MSRGGSYGGGRSSLGYLFGKDDQPIKPQVTKVVLPPPYGIDLNPHDNSNNNPSPSPSSPSPSPSPSPKQLVS-NNYPRAHGQNSGNFITDRPSTKVKSVP

Query:  GGDSSLGYLFGD
        GGDSSLGYLFGD
Subjt:  GGDSSLGYLFGD

XP_008452039.1 PREDICTED: protein SPIRAL1-like 5 [Cucumis melo]5.6e-4283.19Show/hide
Query:  MSRGGSYGGGRSSLGYLFGKDDQPIKPQVTKVVLPPPYGIDLNPHDNSNNNPSPSPSSPSPSPSPSPKQLVS-NNYPRAHGQNSGNFITDRPSTKVKSVP
        MSRGGSYGGGRSSLGYLFGKDDQP KPQV+KVVLPPPYGIDLNP D+ +NN           PSPSPKQLVS NNYPRAHGQNSGNFITDRPSTKVKS P
Subjt:  MSRGGSYGGGRSSLGYLFGKDDQPIKPQVTKVVLPPPYGIDLNPHDNSNNNPSPSPSSPSPSPSPSPKQLVS-NNYPRAHGQNSGNFITDRPSTKVKSVP

Query:  GGDSSLGYLFGDK
        GGDSSLGYLFGDK
Subjt:  GGDSSLGYLFGDK

XP_022136791.1 protein SPIRAL1-like 5 [Momordica charantia]6.2e-4178.57Show/hide
Query:  MSRGGSYGGGRSSLGYLFGKDDQPIKPQVTKVVLPPPYGIDLNPHDNSNNNPSPSPSSPSPSPSPSPKQLVSNNYPRAHGQNSGNFITDRPSTKVKSVPG
        MSRGGSYGGGRSSLGYLFG DDQP KPQV++V+LPPPYGID++P D SNN            PSPSPKQLVSNNYPRAHGQNSGNF+TDRPSTKVKS PG
Subjt:  MSRGGSYGGGRSSLGYLFGKDDQPIKPQVTKVVLPPPYGIDLNPHDNSNNNPSPSPSSPSPSPSPSPKQLVSNNYPRAHGQNSGNFITDRPSTKVKSVPG

Query:  GDSSLGYLFGDK
         DSSLGYLFGDK
Subjt:  GDSSLGYLFGDK

XP_022941576.1 protein SPIRAL1-like 5 [Cucurbita moschata]8.0e-4179.46Show/hide
Query:  MSRGGSYGGGRSSLGYLFGKDDQPIKPQVTKVVLPPPYGIDLNPHDNSNNNPSPSPSSPSPSPSPSPKQLVSNNYPRAHGQNSGNFITDRPSTKVKSVPG
        MSRGGSYGGGRSSLGYLFG DD+P KPQV+KVVLPPPYGID+NP D +N             PSPSPKQ  SNNYPRAHGQNSGNFITDRPSTKVKSVPG
Subjt:  MSRGGSYGGGRSSLGYLFGKDDQPIKPQVTKVVLPPPYGIDLNPHDNSNNNPSPSPSSPSPSPSPSPKQLVSNNYPRAHGQNSGNFITDRPSTKVKSVPG

Query:  GDSSLGYLFGDK
        GDSSLGYLFGDK
Subjt:  GDSSLGYLFGDK

XP_038883008.1 protein SPIRAL1-like 5 [Benincasa hispida]9.2e-4585.71Show/hide
Query:  MSRGGSYGGGRSSLGYLFGKDDQPIKPQVTKVVLPPPYGIDLNPHDNSNNNPSPSPSSPSPSPSPSPKQLVSNNYPRAHGQNSGNFITDRPSTKVKSVPG
        MSRGGSYGGGRSSLGYLFGKDDQP KPQV+KVVLPPPYGIDLNP DN+NNN           PSPSPKQLVSNNYPRAHGQNSGNFITDRPSTKVKS PG
Subjt:  MSRGGSYGGGRSSLGYLFGKDDQPIKPQVTKVVLPPPYGIDLNPHDNSNNNPSPSPSSPSPSPSPSPKQLVSNNYPRAHGQNSGNFITDRPSTKVKSVPG

Query:  GDSSLGYLFGDK
        GDSSLGYLFGDK
Subjt:  GDSSLGYLFGDK

TrEMBL top hitse value%identityAlignment
A0A0A0KUV0 Uncharacterized protein1.0e-4183.04Show/hide
Query:  MSRGGSYGGGRSSLGYLFGKDDQPIKPQVTKVVLPPPYGIDLNPHDNSNNNPSPSPSSPSPSPSPSPKQLVS-NNYPRAHGQNSGNFITDRPSTKVKSVP
        MSRGGSYGGGRSSLGYLFGKDDQP KPQV+KVVLPPPYGIDLNP D++NN            PSPSPKQLVS NNYPRAHGQNSGNFITDRPSTKVKS P
Subjt:  MSRGGSYGGGRSSLGYLFGKDDQPIKPQVTKVVLPPPYGIDLNPHDNSNNNPSPSPSSPSPSPSPSPKQLVS-NNYPRAHGQNSGNFITDRPSTKVKSVP

Query:  GGDSSLGYLFGD
        GGDSSLGYLFGD
Subjt:  GGDSSLGYLFGD

A0A1S3BTQ0 protein SPIRAL1-like 52.7e-4283.19Show/hide
Query:  MSRGGSYGGGRSSLGYLFGKDDQPIKPQVTKVVLPPPYGIDLNPHDNSNNNPSPSPSSPSPSPSPSPKQLVS-NNYPRAHGQNSGNFITDRPSTKVKSVP
        MSRGGSYGGGRSSLGYLFGKDDQP KPQV+KVVLPPPYGIDLNP D+ +NN           PSPSPKQLVS NNYPRAHGQNSGNFITDRPSTKVKS P
Subjt:  MSRGGSYGGGRSSLGYLFGKDDQPIKPQVTKVVLPPPYGIDLNPHDNSNNNPSPSPSSPSPSPSPSPKQLVS-NNYPRAHGQNSGNFITDRPSTKVKSVP

Query:  GGDSSLGYLFGDK
        GGDSSLGYLFGDK
Subjt:  GGDSSLGYLFGDK

A0A5D3CZ49 Protein SPIRAL1-like 52.7e-4283.19Show/hide
Query:  MSRGGSYGGGRSSLGYLFGKDDQPIKPQVTKVVLPPPYGIDLNPHDNSNNNPSPSPSSPSPSPSPSPKQLVS-NNYPRAHGQNSGNFITDRPSTKVKSVP
        MSRGGSYGGGRSSLGYLFGKDDQP KPQV+KVVLPPPYGIDLNP D+ +NN           PSPSPKQLVS NNYPRAHGQNSGNFITDRPSTKVKS P
Subjt:  MSRGGSYGGGRSSLGYLFGKDDQPIKPQVTKVVLPPPYGIDLNPHDNSNNNPSPSPSSPSPSPSPSPKQLVS-NNYPRAHGQNSGNFITDRPSTKVKSVP

Query:  GGDSSLGYLFGDK
        GGDSSLGYLFGDK
Subjt:  GGDSSLGYLFGDK

A0A6J1C4I1 protein SPIRAL1-like 53.0e-4178.57Show/hide
Query:  MSRGGSYGGGRSSLGYLFGKDDQPIKPQVTKVVLPPPYGIDLNPHDNSNNNPSPSPSSPSPSPSPSPKQLVSNNYPRAHGQNSGNFITDRPSTKVKSVPG
        MSRGGSYGGGRSSLGYLFG DDQP KPQV++V+LPPPYGID++P D SNN            PSPSPKQLVSNNYPRAHGQNSGNF+TDRPSTKVKS PG
Subjt:  MSRGGSYGGGRSSLGYLFGKDDQPIKPQVTKVVLPPPYGIDLNPHDNSNNNPSPSPSSPSPSPSPSPKQLVSNNYPRAHGQNSGNFITDRPSTKVKSVPG

Query:  GDSSLGYLFGDK
         DSSLGYLFGDK
Subjt:  GDSSLGYLFGDK

A0A6J1J7K0 protein SPIRAL1-like 53.9e-4179.46Show/hide
Query:  MSRGGSYGGGRSSLGYLFGKDDQPIKPQVTKVVLPPPYGIDLNPHDNSNNNPSPSPSSPSPSPSPSPKQLVSNNYPRAHGQNSGNFITDRPSTKVKSVPG
        MSRGGSYGGGRSSLGYLFG DD+P KPQV+KVVLPPPYGID+NP D +N             PSPSPKQ  SNNYPRAHGQNSGNFITDRPSTKVKSVPG
Subjt:  MSRGGSYGGGRSSLGYLFGKDDQPIKPQVTKVVLPPPYGIDLNPHDNSNNNPSPSPSSPSPSPSPSPKQLVSNNYPRAHGQNSGNFITDRPSTKVKSVPG

Query:  GDSSLGYLFGDK
        GDSSLGYLFGDK
Subjt:  GDSSLGYLFGDK

SwissProt top hitse value%identityAlignment
B3H4F1 Protein SPIRAL1-like 12.7e-1544.53Show/hide
Query:  MSRGGSYGGGRSSLGYLFGKDDQPIKPQVTKVVLPPPYGIDLNPHDNSNNNPSPSPSSPSPSPSPSPKQLV------------------SNNYPRAHGQN
        M RG S GGG+SSLGYLFG  + P KP +                   NN P+PS  +   S  PSPK +                   +NNY RA GQN
Subjt:  MSRGGSYGGGRSSLGYLFGKDDQPIKPQVTKVVLPPPYGIDLNPHDNSNNNPSPSPSSPSPSPSPSPKQLV------------------SNNYPRAHGQN

Query:  SGNFITDRPSTKVKSVPGGDSSLGYLFG
        +GNF+TDRPSTKV + PGG SSL YLFG
Subjt:  SGNFITDRPSTKVKSVPGGDSSLGYLFG

Q7Y1L9 Protein SPIRAL1-like 12.2e-1747.24Show/hide
Query:  MSRGGSYGGGRSSLGYLFGKDDQP---IKPQVTKVVLPPPYGIDLNPHDNSNNNPSPSPSSPSPSPSPSP------KQL--------VSNNYPRAHGQNS
        MSRGGS GGG+SSLGYLFG ++ P    KP       P P              P+P+ +  +P+  PSP      KQ+         +NNY RA GQN+
Subjt:  MSRGGSYGGGRSSLGYLFGKDDQP---IKPQVTKVVLPPPYGIDLNPHDNSNNNPSPSPSSPSPSPSPSP------KQL--------VSNNYPRAHGQNS

Query:  GNFITDRPSTKVKSVPGGDSSLGYLFG
        GNF+TDRPSTKV + PGG SSLGYLFG
Subjt:  GNFITDRPSTKVKSVPGGDSSLGYLFG

Q8LGD1 Protein SPIRAL1-like 51.2e-2354.31Show/hide
Query:  MSRGGSYGGGRSSLGYLFGKDDQ----PIKPQVTKVVLPPPYGIDLNPHDNSNNNPSPSPSSPSPSPSPSPKQLVSNNYPRAHGQNSGNFITDRPSTKVK
        MSRGGS+GGG+SSLGYLFG D++    P  P   K    PPYG+D    D+  +                PK + +NNY R  GQNSGNF+TDRP+TKVK
Subjt:  MSRGGSYGGGRSSLGYLFGKDDQ----PIKPQVTKVVLPPPYGIDLNPHDNSNNNPSPSPSSPSPSPSPSPKQLVSNNYPRAHGQNSGNFITDRPSTKVK

Query:  SVPGGDSSLGYLFGDK
        SVPGG SSLGYLFGDK
Subjt:  SVPGGDSSLGYLFGDK

Q9LE54 Protein SPIRAL1-like 23.0e-1446.15Show/hide
Query:  MSRGGSYGGGRSSLGYLFGKDDQPIKPQVTKVVLPPPYGIDLNPHDNSNNNPSPSPSSPSPSPSPSPKQL-------VSNNYPRAHGQNSGNFITDRPST
        M RG S GGG+SSLGYLFG  + P    V K            P +  ++  +P   + + +   S KQ+        +NNY RA GQN+GNFITDRPST
Subjt:  MSRGGSYGGGRSSLGYLFGKDDQPIKPQVTKVVLPPPYGIDLNPHDNSNNNPSPSPSSPSPSPSPSPKQL-------VSNNYPRAHGQNSGNFITDRPST

Query:  KVKSVPGGDSSLGYLFG
        KV S PGG SSL YLFG
Subjt:  KVKSVPGGDSSLGYLFG

Q9SJW3 Protein SPIRAL18.7e-1445.6Show/hide
Query:  MSRGGSYGGGRSSLGYLFGKDDQPIKPQVTKVVLPPPYGIDLNPHDNSNNNPSP----------SPSSPSPSPSPSPKQLVS------NNYPRAHGQNSG
        M RG S GGG+SSL YLFG D    KP    V  P P   +      SNN P+P          + ++ S  P+   KQ+ +      NNY RA GQN+G
Subjt:  MSRGGSYGGGRSSLGYLFGKDDQPIKPQVTKVVLPPPYGIDLNPHDNSNNNPSP----------SPSSPSPSPSPSPKQLVS------NNYPRAHGQNSG

Query:  NFITDRPSTKVKSVPGGDSSLGYLF
        NF+TDRPSTKV + PGG SSL YLF
Subjt:  NFITDRPSTKVKSVPGGDSSLGYLF

Arabidopsis top hitse value%identityAlignment
AT1G26355.1 SPIRAL1-like11.9e-1644.53Show/hide
Query:  MSRGGSYGGGRSSLGYLFGKDDQPIKPQVTKVVLPPPYGIDLNPHDNSNNNPSPSPSSPSPSPSPSPKQLV------------------SNNYPRAHGQN
        M RG S GGG+SSLGYLFG  + P KP +                   NN P+PS  +   S  PSPK +                   +NNY RA GQN
Subjt:  MSRGGSYGGGRSSLGYLFGKDDQPIKPQVTKVVLPPPYGIDLNPHDNSNNNPSPSPSSPSPSPSPSPKQLV------------------SNNYPRAHGQN

Query:  SGNFITDRPSTKVKSVPGGDSSLGYLFG
        +GNF+TDRPSTKV + PGG SSL YLFG
Subjt:  SGNFITDRPSTKVKSVPGGDSSLGYLFG

AT1G69230.1 SPIRAL1-like22.1e-1546.15Show/hide
Query:  MSRGGSYGGGRSSLGYLFGKDDQPIKPQVTKVVLPPPYGIDLNPHDNSNNNPSPSPSSPSPSPSPSPKQL-------VSNNYPRAHGQNSGNFITDRPST
        M RG S GGG+SSLGYLFG  + P    V K            P +  ++  +P   + + +   S KQ+        +NNY RA GQN+GNFITDRPST
Subjt:  MSRGGSYGGGRSSLGYLFGKDDQPIKPQVTKVVLPPPYGIDLNPHDNSNNNPSPSPSSPSPSPSPSPKQL-------VSNNYPRAHGQNSGNFITDRPST

Query:  KVKSVPGGDSSLGYLFG
        KV S PGG SSL YLFG
Subjt:  KVKSVPGGDSSLGYLFG

AT1G69230.2 SPIRAL1-like22.1e-1546.15Show/hide
Query:  MSRGGSYGGGRSSLGYLFGKDDQPIKPQVTKVVLPPPYGIDLNPHDNSNNNPSPSPSSPSPSPSPSPKQL-------VSNNYPRAHGQNSGNFITDRPST
        M RG S GGG+SSLGYLFG  + P    V K            P +  ++  +P   + + +   S KQ+        +NNY RA GQN+GNFITDRPST
Subjt:  MSRGGSYGGGRSSLGYLFGKDDQPIKPQVTKVVLPPPYGIDLNPHDNSNNNPSPSPSSPSPSPSPSPKQL-------VSNNYPRAHGQNSGNFITDRPST

Query:  KVKSVPGGDSSLGYLFG
        KV S PGG SSL YLFG
Subjt:  KVKSVPGGDSSLGYLFG

AT2G03680.1 spiral16.2e-1545.6Show/hide
Query:  MSRGGSYGGGRSSLGYLFGKDDQPIKPQVTKVVLPPPYGIDLNPHDNSNNNPSP----------SPSSPSPSPSPSPKQLVS------NNYPRAHGQNSG
        M RG S GGG+SSL YLFG D    KP    V  P P   +      SNN P+P          + ++ S  P+   KQ+ +      NNY RA GQN+G
Subjt:  MSRGGSYGGGRSSLGYLFGKDDQPIKPQVTKVVLPPPYGIDLNPHDNSNNNPSP----------SPSSPSPSPSPSPKQLVS------NNYPRAHGQNSG

Query:  NFITDRPSTKVKSVPGGDSSLGYLF
        NF+TDRPSTKV + PGG SSL YLF
Subjt:  NFITDRPSTKVKSVPGGDSSLGYLF

AT4G23496.1 SPIRAL1-like58.6e-2554.31Show/hide
Query:  MSRGGSYGGGRSSLGYLFGKDDQ----PIKPQVTKVVLPPPYGIDLNPHDNSNNNPSPSPSSPSPSPSPSPKQLVSNNYPRAHGQNSGNFITDRPSTKVK
        MSRGGS+GGG+SSLGYLFG D++    P  P   K    PPYG+D    D+  +                PK + +NNY R  GQNSGNF+TDRP+TKVK
Subjt:  MSRGGSYGGGRSSLGYLFGKDDQ----PIKPQVTKVVLPPPYGIDLNPHDNSNNNPSPSPSSPSPSPSPSPKQLVSNNYPRAHGQNSGNFITDRPSTKVK

Query:  SVPGGDSSLGYLFGDK
        SVPGG SSLGYLFGDK
Subjt:  SVPGGDSSLGYLFGDK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTAGAGGTGGAAGCTATGGTGGTGGAAGAAGCTCTTTAGGCTATCTTTTTGGTAAGGATGATCAACCCATAAAGCCTCAAGTTACCAAAGTTGTTCTTCCTCCTCC
TTATGGAATTGATCTCAACCCTCACGATAATAGCAATAATAATCCTTCTCCTTCTCCTTCTTCTCCTTCTCCCTCTCCCTCTCCATCTCCCAAACAACTTGTTTCCAATA
ATTATCCTCGAGCTCATGGCCAAAACTCCGGCAACTTCATAACGGATCGTCCATCAACCAAGGTGAAATCTGTTCCGGGTGGCGATTCGTCGCTAGGGTATCTGTTTGGA
GATAAGTGA
mRNA sequenceShow/hide mRNA sequence
ACAAATTAGGGTTTTCAAAGCTAAAGATCATCAGATCCAGCCAGAAGGCAATATCATGAGTAGAGGTGGAAGCTATGGTGGTGGAAGAAGCTCTTTAGGCTATCTTTTTG
GTAAGGATGATCAACCCATAAAGCCTCAAGTTACCAAAGTTGTTCTTCCTCCTCCTTATGGAATTGATCTCAACCCTCACGATAATAGCAATAATAATCCTTCTCCTTCT
CCTTCTTCTCCTTCTCCCTCTCCCTCTCCATCTCCCAAACAACTTGTTTCCAATAATTATCCTCGAGCTCATGGCCAAAACTCCGGCAACTTCATAACGGATCGTCCATC
AACCAAGGTGAAATCTGTTCCGGGTGGCGATTCGTCGCTAGGGTATCTGTTTGGAGATAAGTGAAATATTAATATCTATCTCTCTAGCTGACTATATTGGGAAGGAAATT
CTAAAGGGTAATATGCTTTAGTATGAGTGGTTTTTCTGAATAAAATGTGTGCAATTATGATTATGTAGCTTGAGAATTTGTGTAGCCCTATATAGTTTGATATAGTTTGT
ACTTGTGTTATATAGCTAGTGATCTATTTGTTAAACCAATCTGATGCTTCAAATATCTATGTAATTGAATAGCATCATGATATGATTGTAGTTTTAATTTGTTAGTCTAT
TGTCAAAATTTGTGAGGACCAATAAACATGAAATTGCACTTTTTATTTGATTTGAGTGTTTCAATATTCATTGTGTTTGTGGTTGCTTTAAAACTAGGAGTTGAATGGTA
TTAGCTATATATATAAAACCAAAATTCTATTT
Protein sequenceShow/hide protein sequence
MSRGGSYGGGRSSLGYLFGKDDQPIKPQVTKVVLPPPYGIDLNPHDNSNNNPSPSPSSPSPSPSPSPKQLVSNNYPRAHGQNSGNFITDRPSTKVKSVPGGDSSLGYLFG
DK