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Lsi07G002800 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G002800
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr07:3020299..3027389
RNA-Seq ExpressionLsi07G002800
SyntenyLsi07G002800
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142869.1 uncharacterized protein LOC111012878 [Momordica charantia]2.7e-4087Show/hide
Query:  MPISADSSSSSSRSSSFLECATPTSPSIQLVSKSVSDRLLGKFFDASKFDFDSEQSSLWSPPIPRRVFLDSPTDVCSGYEVLLKLDNAKKAWRKFIICFR
        MPISA SSSSSS SSSFLEC +PTSPS+QLVSKSVSDRLLGKFFDAS+FDFD EQSSLWSPPIPRRVFLDSP +VCSGYEV  KLD+AKKAWRKF+ICFR
Subjt:  MPISADSSSSSSRSSSFLECATPTSPSIQLVSKSVSDRLLGKFFDASKFDFDSEQSSLWSPPIPRRVFLDSPTDVCSGYEVLLKLDNAKKAWRKFIICFR

XP_022984340.1 uncharacterized protein LOC111482673 isoform X1 [Cucurbita maxima]2.2e-3784.85Show/hide
Query:  MPISADSSSSSSRSSSFLECATPTSPSIQLVSKSVSDRLLGKFFDASKFDFDSEQSSLWSPPIPRRVFLDSPTDVCSGYEVLLKLDNAKKAWRKFIICF
        MP SADSSSSSS SSSFL+CATP S S+QLVSKS SDRLL KFFDASKF+FD EQSSLWSPPIPRRVFLDSP DVCSGYEVL KL+N KKAWRKFI CF
Subjt:  MPISADSSSSSSRSSSFLECATPTSPSIQLVSKSVSDRLLGKFFDASKFDFDSEQSSLWSPPIPRRVFLDSPTDVCSGYEVLLKLDNAKKAWRKFIICF

XP_023552146.1 uncharacterized protein LOC111809909 isoform X1 [Cucurbita pepo subsp. pepo]1.6e-4063.75Show/hide
Query:  MPISAD-------SSSSSSRSSSFLECATPTSPSIQLVSKSVSDRLLGKFFDASKFDFDSEQSSLWSPPIPRRVFLDSPTDVCSGYEVLLKLDNAKKAWR
        MP SAD       SSSSSS SSSFL+CATP S S+QLVSKS SDRLLGKFFDASKFDFD EQSSLWSPPIPRRVFLDSP DVCSGYEVL KL+NAKKAWR
Subjt:  MPISAD-------SSSSSSRSSSFLECATPTSPSIQLVSKSVSDRLLGKFFDASKFDFDSEQSSLWSPPIPRRVFLDSPTDVCSGYEVLLKLDNAKKAWR

Query:  KFIICFR-------------------------YSDPSNSGMLSTVLQLQMGYFKKKNKRE
        K I CF                          YS PS S MLSTV   + G  K+KN+RE
Subjt:  KFIICFR-------------------------YSDPSNSGMLSTVLQLQMGYFKKKNKRE

XP_038876207.1 uncharacterized protein LOC120068490 isoform X1 [Benincasa hispida]1.0e-3988.89Show/hide
Query:  MPISADSSSSSSRSSSFLECATPTSPSIQLVSKSVSDRLLGKFFDASKFDFDSEQSSLWSPPIPRRVFLDSPTDVCSGYEVLLKLDNAKKAWRKFIICF
        MPISADSSSSSS S+SFLECATPTSPS+QLVSKSVSDRLLGKFFDASKFDFD EQSSLWSPPI R+VFLDSP DVCSGY VL KLD A+KAWRKFIICF
Subjt:  MPISADSSSSSSRSSSFLECATPTSPSIQLVSKSVSDRLLGKFFDASKFDFDSEQSSLWSPPIPRRVFLDSPTDVCSGYEVLLKLDNAKKAWRKFIICF

XP_038876217.1 uncharacterized protein LOC120068490 isoform X2 [Benincasa hispida]1.0e-3988.89Show/hide
Query:  MPISADSSSSSSRSSSFLECATPTSPSIQLVSKSVSDRLLGKFFDASKFDFDSEQSSLWSPPIPRRVFLDSPTDVCSGYEVLLKLDNAKKAWRKFIICF
        MPISADSSSSSS S+SFLECATPTSPS+QLVSKSVSDRLLGKFFDASKFDFD EQSSLWSPPI R+VFLDSP DVCSGY VL KLD A+KAWRKFIICF
Subjt:  MPISADSSSSSSRSSSFLECATPTSPSIQLVSKSVSDRLLGKFFDASKFDFDSEQSSLWSPPIPRRVFLDSPTDVCSGYEVLLKLDNAKKAWRKFIICF

TrEMBL top hitse value%identityAlignment
A0A6J1CMP9 uncharacterized protein LOC1110128781.3e-4087Show/hide
Query:  MPISADSSSSSSRSSSFLECATPTSPSIQLVSKSVSDRLLGKFFDASKFDFDSEQSSLWSPPIPRRVFLDSPTDVCSGYEVLLKLDNAKKAWRKFIICFR
        MPISA SSSSSS SSSFLEC +PTSPS+QLVSKSVSDRLLGKFFDAS+FDFD EQSSLWSPPIPRRVFLDSP +VCSGYEV  KLD+AKKAWRKF+ICFR
Subjt:  MPISADSSSSSSRSSSFLECATPTSPSIQLVSKSVSDRLLGKFFDASKFDFDSEQSSLWSPPIPRRVFLDSPTDVCSGYEVLLKLDNAKKAWRKFIICFR

A0A6J1EYJ9 uncharacterized protein LOC1114376032.0e-3681.73Show/hide
Query:  MPISAD-----SSSSSSRSSSFLECATPTSPSIQLVSKSVSDRLLGKFFDASKFDFDSEQSSLWSPPIPRRVFLDSPTDVCSGYEVLLKLDNAKKAWRKF
        MP SAD     SSSSSS SSSFL+CATP S S+QLVSK  SDRLLGKFFDASKFDFD EQSSLWSPPIPRRVFLDSP DVCSGYEVL KL+NAKKAWRK 
Subjt:  MPISAD-----SSSSSSRSSSFLECATPTSPSIQLVSKSVSDRLLGKFFDASKFDFDSEQSSLWSPPIPRRVFLDSPTDVCSGYEVLLKLDNAKKAWRKF

Query:  IICF
        I CF
Subjt:  IICF

A0A6J1J4Z5 uncharacterized protein LOC111482673 isoform X21.0e-3784.85Show/hide
Query:  MPISADSSSSSSRSSSFLECATPTSPSIQLVSKSVSDRLLGKFFDASKFDFDSEQSSLWSPPIPRRVFLDSPTDVCSGYEVLLKLDNAKKAWRKFIICF
        MP SADSSSSSS SSSFL+CATP S S+QLVSKS SDRLL KFFDASKF+FD EQSSLWSPPIPRRVFLDSP DVCSGYEVL KL+N KKAWRKFI CF
Subjt:  MPISADSSSSSSRSSSFLECATPTSPSIQLVSKSVSDRLLGKFFDASKFDFDSEQSSLWSPPIPRRVFLDSPTDVCSGYEVLLKLDNAKKAWRKFIICF

A0A6J1J7J0 uncharacterized protein LOC1114820716.8e-3782Show/hide
Query:  MPISADSSSSSSRSSSFLECATPTSPSIQLVSKSVSDRLLGKFFDASKFDFDSEQSSLWSPPIPRRVFLDSPTDVCSGYEVLLKLDNAKKAWRKFIICFR
        MPIS +SS+ S  SS F+ECATPT PS+QLVSKSVSDRLLGKFFDAS+FDFD EQSSLWSPPIPRRVFLDSP DVCSGYEVL KL+ AK AWRKF+ICFR
Subjt:  MPISADSSSSSSRSSSFLECATPTSPSIQLVSKSVSDRLLGKFFDASKFDFDSEQSSLWSPPIPRRVFLDSPTDVCSGYEVLLKLDNAKKAWRKFIICFR

A0A6J1J8D3 uncharacterized protein LOC111482673 isoform X11.0e-3784.85Show/hide
Query:  MPISADSSSSSSRSSSFLECATPTSPSIQLVSKSVSDRLLGKFFDASKFDFDSEQSSLWSPPIPRRVFLDSPTDVCSGYEVLLKLDNAKKAWRKFIICF
        MP SADSSSSSS SSSFL+CATP S S+QLVSKS SDRLL KFFDASKF+FD EQSSLWSPPIPRRVFLDSP DVCSGYEVL KL+N KKAWRKFI CF
Subjt:  MPISADSSSSSSRSSSFLECATPTSPSIQLVSKSVSDRLLGKFFDASKFDFDSEQSSLWSPPIPRRVFLDSPTDVCSGYEVLLKLDNAKKAWRKFIICF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCGCGGTCACGATACCTTCGTCTTCGCCGGCAAGTTTCTTCTCCGTCGTCTATCCGATGCCAATTTCCGCCGATTCTTCTTCCTCTTCCTCCCGCTCCTCTTCATT
TCTAGAATGCGCCACTCCGACGAGTCCGAGCATTCAACTCGTTTCCAAATCGGTGTCGGATCGGCTTCTCGGCAAGTTCTTTGACGCCTCTAAATTCGACTTCGATTCTG
AACAGAGTAGCTTGTGGTCCCCGCCGATTCCTCGGCGAGTGTTTCTGGATTCTCCGACCGATGTTTGCTCCGGTTACGAGGTTCTCTTGAAGCTTGACAATGCGAAGAAG
GCATGGAGGAAATTCATTATCTGTTTCAGATACAGTGACCCTTCAAACTCAGGCATGCTCAGTACAGTCCTGCAACTGCAAATGGGATATTTTAAGAAGAAAAACAAAAG
GGAATTTCTCTGCAATTGTCTGCTGAACAGGATAATGATTACAGTTTATATCATGCAATTCTTTTGTATAAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGGGCGCGGTCACGATACCTTCGTCTTCGCCGGCAAGTTTCTTCTCCGTCGTCTATCCGATGCCAATTTCCGCCGATTCTTCTTCCTCTTCCTCCCGCTCCTCTTCATT
TCTAGAATGCGCCACTCCGACGAGTCCGAGCATTCAACTCGTTTCCAAATCGGTGTCGGATCGGCTTCTCGGCAAGTTCTTTGACGCCTCTAAATTCGACTTCGATTCTG
AACAGAGTAGCTTGTGGTCCCCGCCGATTCCTCGGCGAGTGTTTCTGGATTCTCCGACCGATGTTTGCTCCGGTTACGAGGTTCTCTTGAAGCTTGACAATGCGAAGAAG
GCATGGAGGAAATTCATTATCTGTTTCAGATACAGTGACCCTTCAAACTCAGGCATGCTCAGTACAGTCCTGCAACTGCAAATGGGATATTTTAAGAAGAAAAACAAAAG
GGAATTTCTCTGCAATTGTCTGCTGAACAGGATAATGATTACAGTTTATATCATGCAATTCTTTTGTATAAGATAA
Protein sequenceShow/hide protein sequence
MGAVTIPSSSPASFFSVVYPMPISADSSSSSSRSSSFLECATPTSPSIQLVSKSVSDRLLGKFFDASKFDFDSEQSSLWSPPIPRRVFLDSPTDVCSGYEVLLKLDNAKK
AWRKFIICFRYSDPSNSGMLSTVLQLQMGYFKKKNKREFLCNCLLNRIMITVYIMQFFCIR