; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi07G002840 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G002840
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUbiquitin domain-containing protein
Genome locationchr07:3061772..3065994
RNA-Seq ExpressionLsi07G002840
SyntenyLsi07G002840
Gene Ontology termsNA
InterPro domainsIPR032752 - DC-UbP/UBTD2, N-terminal domain
IPR038169 - DC-UbP/UBTD2, N-terminal domain superfamily
IPR039869 - Ubiquitin domain-containing protein 1/2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004137230.1 ubiquitin domain-containing protein 1 [Cucumis sativus]5.3e-5695.65Show/hide
Query:  MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLMQLRDEFWDTAPHYGGRKEIWDALRAAAEAELSLAQAIIDSAGVIVQNADLTICYDERGAKYELP
        MGCAGSSQT  DGSIKKIRKPKSWKHPQPITRSQL QLRDEFWDTAPHYGGRKEIWDALRAAAEAELSLAQAI+DSAGVIVQNADLTICYDERGAKYELP
Subjt:  MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLMQLRDEFWDTAPHYGGRKEIWDALRAAAEAELSLAQAIIDSAGVIVQNADLTICYDERGAKYELP

Query:  NYVLSEPTNLIRNSS
        NYVLSEPTNLIR+SS
Subjt:  NYVLSEPTNLIRNSS

XP_022931411.1 ubiquitin domain-containing protein 2-like [Cucurbita moschata]3.7e-5796.52Show/hide
Query:  MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLMQLRDEFWDTAPHYGGRKEIWDALRAAAEAELSLAQAIIDSAGVIVQNADLTICYDERGAKYELP
        MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQL+QLR+EFWDTAPHYGGRKEIWDALRAAAEAELSLAQAIIDSAGVI+QNADLTICYDERGAKYELP
Subjt:  MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLMQLRDEFWDTAPHYGGRKEIWDALRAAAEAELSLAQAIIDSAGVIVQNADLTICYDERGAKYELP

Query:  NYVLSEPTNLIRNSS
        NYVLSEPTNLIR+SS
Subjt:  NYVLSEPTNLIRNSS

XP_022984742.1 ubiquitin domain-containing protein 2-like [Cucurbita maxima]1.5e-5593.91Show/hide
Query:  MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLMQLRDEFWDTAPHYGGRKEIWDALRAAAEAELSLAQAIIDSAGVIVQNADLTICYDERGAKYELP
        MGCAGSSQTNG+GSIKKIRKPKSWKHPQPITR QL+QLR+EFWDTAPHYGGRKEIWDALRAAAEAELSLAQAIIDSAGVI+QNADLTICYDERG KYELP
Subjt:  MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLMQLRDEFWDTAPHYGGRKEIWDALRAAAEAELSLAQAIIDSAGVIVQNADLTICYDERGAKYELP

Query:  NYVLSEPTNLIRNSS
        NYVLSEPTNLIR+SS
Subjt:  NYVLSEPTNLIRNSS

XP_023552879.1 ubiquitin domain-containing protein 2-like [Cucurbita pepo subsp. pepo]2.4e-5695.65Show/hide
Query:  MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLMQLRDEFWDTAPHYGGRKEIWDALRAAAEAELSLAQAIIDSAGVIVQNADLTICYDERGAKYELP
        MGCAGSSQTNGDGSIKKI KPKSWKHPQPITRSQL+QLR+EFWDTAPHYGGRKEIWDALRAAAEAELSLAQAIIDSAGVI+QNADLTICYDERGAKYELP
Subjt:  MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLMQLRDEFWDTAPHYGGRKEIWDALRAAAEAELSLAQAIIDSAGVIVQNADLTICYDERGAKYELP

Query:  NYVLSEPTNLIRNSS
        NYVLSEPTNLIR+SS
Subjt:  NYVLSEPTNLIRNSS

XP_038882682.1 ubiquitin domain-containing protein 2-like [Benincasa hispida]3.3e-5899.13Show/hide
Query:  MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLMQLRDEFWDTAPHYGGRKEIWDALRAAAEAELSLAQAIIDSAGVIVQNADLTICYDERGAKYELP
        MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLMQLRDEFWDTAPHYGGRKEIWDALRAAAEAELSLAQAIIDSAGVIVQNADLTICYDERGAKYELP
Subjt:  MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLMQLRDEFWDTAPHYGGRKEIWDALRAAAEAELSLAQAIIDSAGVIVQNADLTICYDERGAKYELP

Query:  NYVLSEPTNLIRNSS
        NYVLSEPTNLIR+SS
Subjt:  NYVLSEPTNLIRNSS

TrEMBL top hitse value%identityAlignment
A0A0A0KVJ9 UBD domain-containing protein2.6e-5695.65Show/hide
Query:  MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLMQLRDEFWDTAPHYGGRKEIWDALRAAAEAELSLAQAIIDSAGVIVQNADLTICYDERGAKYELP
        MGCAGSSQT  DGSIKKIRKPKSWKHPQPITRSQL QLRDEFWDTAPHYGGRKEIWDALRAAAEAELSLAQAI+DSAGVIVQNADLTICYDERGAKYELP
Subjt:  MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLMQLRDEFWDTAPHYGGRKEIWDALRAAAEAELSLAQAIIDSAGVIVQNADLTICYDERGAKYELP

Query:  NYVLSEPTNLIRNSS
        NYVLSEPTNLIR+SS
Subjt:  NYVLSEPTNLIRNSS

A0A6J1CN58 ubiquitin domain-containing protein 1-like2.8e-5593.04Show/hide
Query:  MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLMQLRDEFWDTAPHYGGRKEIWDALRAAAEAELSLAQAIIDSAGVIVQNADLTICYDERGAKYELP
        MGCAGSS+TNGDGS K+IRKPK WKHPQPITRSQLMQLRDEFWDTAPHYGGR EIWDALRAAAEAE SLAQAIIDSAGVIVQNADLT+CYDERGAKYELP
Subjt:  MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLMQLRDEFWDTAPHYGGRKEIWDALRAAAEAELSLAQAIIDSAGVIVQNADLTICYDERGAKYELP

Query:  NYVLSEPTNLIRNSS
        NYVLSEPTNLIR+SS
Subjt:  NYVLSEPTNLIRNSS

A0A6J1ETK8 ubiquitin domain-containing protein 2-like1.8e-5796.52Show/hide
Query:  MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLMQLRDEFWDTAPHYGGRKEIWDALRAAAEAELSLAQAIIDSAGVIVQNADLTICYDERGAKYELP
        MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQL+QLR+EFWDTAPHYGGRKEIWDALRAAAEAELSLAQAIIDSAGVI+QNADLTICYDERGAKYELP
Subjt:  MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLMQLRDEFWDTAPHYGGRKEIWDALRAAAEAELSLAQAIIDSAGVIVQNADLTICYDERGAKYELP

Query:  NYVLSEPTNLIRNSS
        NYVLSEPTNLIR+SS
Subjt:  NYVLSEPTNLIRNSS

A0A6J1J306 ubiquitin domain-containing protein 2-like7.5e-5693.91Show/hide
Query:  MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLMQLRDEFWDTAPHYGGRKEIWDALRAAAEAELSLAQAIIDSAGVIVQNADLTICYDERGAKYELP
        MGCAGSSQTNG+GSIKKIRKPKSWKHPQPITR QL+QLR+EFWDTAPHYGGRKEIWDALRAAAEAELSLAQAIIDSAGVI+QNADLTICYDERG KYELP
Subjt:  MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLMQLRDEFWDTAPHYGGRKEIWDALRAAAEAELSLAQAIIDSAGVIVQNADLTICYDERGAKYELP

Query:  NYVLSEPTNLIRNSS
        NYVLSEPTNLIR+SS
Subjt:  NYVLSEPTNLIRNSS

A0A6J1J725 ubiquitin domain-containing protein 1-like isoform X28.3e-5593.04Show/hide
Query:  MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLMQLRDEFWDTAPHYGGRKEIWDALRAAAEAELSLAQAIIDSAGVIVQNADLTICYDERGAKYELP
        MGC GSSQTNGDGS KKIRKPK WKHPQPITRSQL QLRDEFWDTAPHYGGR EIWDALRAAAEAELSLAQAIIDSAGVIVQNADLT+CYDERGAKYELP
Subjt:  MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLMQLRDEFWDTAPHYGGRKEIWDALRAAAEAELSLAQAIIDSAGVIVQNADLTICYDERGAKYELP

Query:  NYVLSEPTNLIRNSS
         YVLSEPTNLIR+SS
Subjt:  NYVLSEPTNLIRNSS

SwissProt top hitse value%identityAlignment
Q4V8W7 Ubiquitin domain-containing protein 11.4e-2248.48Show/hide
Query:  GCAG--SSQTNGDGS------------IKKIRKPKSWKHPQPITRSQLMQLRDEFWDTAPHYGGRKEIWDALRAAAEA----ELSLAQAIIDSAGVIVQN
        GC G   ++T G GS            +KK  KPK WK   P+T  QL   RDEFWDTAP + GRKEIWDAL+AAA A    +  LAQAI+D A + + +
Subjt:  GCAG--SSQTNGDGS------------IKKIRKPKSWKHPQPITRSQLMQLRDEFWDTAPHYGGRKEIWDALRAAAEA----ELSLAQAIIDSAGVIVQN

Query:  ADLTICYDERGAKYELPNYVLSEPTNLIRNSS
          LT CYDE G +Y+LP Y L+ P NLI   S
Subjt:  ADLTICYDERGAKYELPNYVLSEPTNLIRNSS

Q5EAE3 Ubiquitin domain-containing protein 22.3e-2250.43Show/hide
Query:  GSSQTNGDGSIKKIRKPKSWKHPQPITRSQLMQLRDEFWDTAPHYGGRKEIWDALRAAAEA----ELSLAQAIIDSAGVIVQNADLTICYDERGAKYELP
        G+    G     K  KPK WK   P+T  QL   RDEFWDTAP + GRKEIWDAL+AAA A    +  LAQAIID A + + +  LT CYDE G +Y+LP
Subjt:  GSSQTNGDGSIKKIRKPKSWKHPQPITRSQLMQLRDEFWDTAPHYGGRKEIWDALRAAAEA----ELSLAQAIIDSAGVIVQNADLTICYDERGAKYELP

Query:  NYVLSEPTNLIRNSS
         Y L+ P N+I   S
Subjt:  NYVLSEPTNLIRNSS

Q640W6 Ubiquitin domain-containing protein 11.8e-2249.6Show/hide
Query:  AGSSQTNGDGS---------IKKIRKPKSWKHPQPITRSQLMQLRDEFWDTAPHYGGRKEIWDALRAAAEA----ELSLAQAIIDSAGVIVQNADLTICY
        +GS   N DG+         +KK  KPK WK   P+T  QL   RDEFWDTAP + GRKEIWDAL+AAA A    +  LAQAIID A + + +  LT CY
Subjt:  AGSSQTNGDGS---------IKKIRKPKSWKHPQPITRSQLMQLRDEFWDTAPHYGGRKEIWDALRAAAEA----ELSLAQAIIDSAGVIVQNADLTICY

Query:  DERGAKYELPNYVLSEPTNLIRNSS
        DE G +Y+LP Y L+ P N+I   S
Subjt:  DERGAKYELPNYVLSEPTNLIRNSS

Q6DG43 Ubiquitin domain-containing protein 22.8e-2350Show/hide
Query:  AGSSQTNGDGS--------IKKIRKPKSWKHPQPITRSQLMQLRDEFWDTAPHYGGRKEIWDALRAAAEA----ELSLAQAIIDSAGVIVQNADLTICYD
        +GS   N DG+          K  KPK WK   P+T  QL   RDEFWDTAP + GRKEIWDAL+AAA+A    +  LAQAIID A + + +  LT CYD
Subjt:  AGSSQTNGDGS--------IKKIRKPKSWKHPQPITRSQLMQLRDEFWDTAPHYGGRKEIWDALRAAAEA----ELSLAQAIIDSAGVIVQNADLTICYD

Query:  ERGAKYELPNYVLSEPTNLIRNSS
        E G +Y+LP Y LS P N+I   S
Subjt:  ERGAKYELPNYVLSEPTNLIRNSS

Q6PGH0 Ubiquitin domain-containing protein 21.1e-2249.6Show/hide
Query:  AGSSQTNGDGS---------IKKIRKPKSWKHPQPITRSQLMQLRDEFWDTAPHYGGRKEIWDALRAAAEA----ELSLAQAIIDSAGVIVQNADLTICY
        +GS   N DG+         +KK  KPK WK   P+T  QL   RDEFWDTAP + GRKEIWDAL+AAA A    +  LAQAIID A + + +  LT CY
Subjt:  AGSSQTNGDGS---------IKKIRKPKSWKHPQPITRSQLMQLRDEFWDTAPHYGGRKEIWDALRAAAEA----ELSLAQAIIDSAGVIVQNADLTICY

Query:  DERGAKYELPNYVLSEPTNLIRNSS
        DE G +Y+LP Y L+ P N+I   S
Subjt:  DERGAKYELPNYVLSEPTNLIRNSS

Arabidopsis top hitse value%identityAlignment
AT1G16960.1 Ubiquitin domain-containing protein1.4e-4372.32Show/hide
Query:  MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLMQLRDEFWDTAPHYGGRKEIWDALRAAAEA-ELSLAQAIIDSAGVIVQNADLTICYDERGAKYEL
        MGC+ SS+T  +G  +KIR+PK+WKHPQPI+R +L Q+R+EFWDTAPHYGG+KEIWDALRAAAE  +LSLAQ I++SAGVIVQN DLTICYDE+G+KYEL
Subjt:  MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLMQLRDEFWDTAPHYGGRKEIWDALRAAAEA-ELSLAQAIIDSAGVIVQNADLTICYDERGAKYEL

Query:  PNYVLSEPTNLI
        P YVL +P+NLI
Subjt:  PNYVLSEPTNLI

AT1G53400.1 Ubiquitin domain-containing protein2.2e-5283.64Show/hide
Query:  MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLMQLRDEFWDTAPHYGGRKEIWDALRAAAEAELSLAQAIIDSAGVIVQNADLTICYDERGAKYELP
        MGCAGS+Q+  DGS+KKIRKPK WKH QPIT+++LM+LR+EFWDTAPHYGGRKEIWDALRAAAEA++SLAQAI+DSAGVIVQN DLT+CYDERGAKYELP
Subjt:  MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLMQLRDEFWDTAPHYGGRKEIWDALRAAAEAELSLAQAIIDSAGVIVQNADLTICYDERGAKYELP

Query:  NYVLSEPTNL
         YVLSEPTNL
Subjt:  NYVLSEPTNL

AT5G45740.1 Ubiquitin domain-containing protein1.0e-4471.93Show/hide
Query:  MGCAGSSQTNGDGSI--KKIRKPKSWKHPQPITRSQLMQLRDEFWDTAPHYGGRKEIWDALRAAAEAELSLAQAIIDSAGVIVQNADLTICYDERGAKYE
        MGC GSSQ   +G    KKI KPK W H +PITR+QL  +R+EFWDT+PHYGG++EIW+ALRAAAEA+L LAQ I+DSAGVIVQN DLT+C+DERGA+YE
Subjt:  MGCAGSSQTNGDGSI--KKIRKPKSWKHPQPITRSQLMQLRDEFWDTAPHYGGRKEIWDALRAAAEAELSLAQAIIDSAGVIVQNADLTICYDERGAKYE

Query:  LPNYVLSEPTNLIR
        LP YVLSEPTNLIR
Subjt:  LPNYVLSEPTNLIR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCTGTGCTGGATCGTCGCAGACCAACGGAGACGGATCGATAAAGAAGATACGGAAGCCAAAATCTTGGAAGCATCCTCAGCCAATTACAAGGTCTCAGCTCATGCA
ACTACGGGATGAGTTCTGGGACACTGCACCTCACTATGGTGGCCGGAAAGAGATTTGGGACGCACTACGAGCAGCTGCTGAAGCTGAGCTTTCTCTTGCTCAAGCAATTA
TAGACAGTGCAGGGGTCATCGTTCAAAATGCAGATTTGACAATCTGTTACGATGAGAGAGGCGCGAAATATGAACTGCCCAACTATGTTTTGAGTGAGCCGACCAATTTG
ATTCGTAACAGTTCATAA
mRNA sequenceShow/hide mRNA sequence
ATTCAATATTCGGAGCTTCTTCTTCTTCCTATTCTACAAAGAGCTTATTCTTCAGCTCTGCAAAATTAATCTTTCTCTCCGGCCTAATCTTTCTCTCCATCTACCTGTGG
ATTGAGGCTTCAGTTCAAGCGAAGCGCAATGGGCTGTGCTGGATCGTCGCAGACCAACGGAGACGGATCGATAAAGAAGATACGGAAGCCAAAATCTTGGAAGCATCCTC
AGCCAATTACAAGGTCTCAGCTCATGCAACTACGGGATGAGTTCTGGGACACTGCACCTCACTATGGTGGCCGGAAAGAGATTTGGGACGCACTACGAGCAGCTGCTGAA
GCTGAGCTTTCTCTTGCTCAAGCAATTATAGACAGTGCAGGGGTCATCGTTCAAAATGCAGATTTGACAATCTGTTACGATGAGAGAGGCGCGAAATATGAACTGCCCAA
CTATGTTTTGAGTGAGCCGACCAATTTGATTCGTAACAGTTCATAAAAAAGAGCTGATCGATTAAATGCATTCACTCCTTTCACTTGGGCTTCCTCTAACTTCCTGTAAG
TTGCTTCTCACTTAATGGGCAAAGTGCAACATCATCCATTACATTGCTTGTACAAAAAAGAAAAAACAAAGATCAGAAAATGGTGGGGAAAAACCCTTCTGCCAGTTTAG
CTGTGTCATAAATTACTTGTATAAATAAAGATTCAATGAAAGTTTGAAAGCACAGTGATCGAACGTCGTATAGAGGGAAAAAAAACGCAATATTGTGGAATGGTGCTTTC
TTGGTGTTTTTAGGTGTTTTTCCTTTTAAATTTGGTTTGATTACGAGCTTACCTAAAGATTTTTTTAGGATGTGTGGTGTGCATTGCCACATTGGTATATTTTTAGTTAA
ATCTTGTTTTGGTTCA
Protein sequenceShow/hide protein sequence
MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLMQLRDEFWDTAPHYGGRKEIWDALRAAAEAELSLAQAIIDSAGVIVQNADLTICYDERGAKYELPNYVLSEPTNL
IRNSS