CuGenDBv2

Gene ID	Lsi07G003130
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages;
Genome location	chr07:3333936..3334880
RNA-Seq Expression	Lsi07G003130
Synteny	Lsi07G003130
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR019685 - Protein of unknown function DUF2534

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0058999.1 hypothetical protein E6C27_scaffold233G00150 [Cucumis melo var. makuwa]

9.2e-119

75.53

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Query:  MFFI-APLSFLDPSTFDLTTVFFIALILLLSLLSLSFIFHLRLKSRTSHHLQRFNSLWTVRFLLVSFISFWALNELLRLSFFRRRYLYPFLPSLPSLHQS
        MFF+ A LSF+DP+TFDLTT+ FIALILLLSLLS+SFIFHL LKSRTSHHLQRFNSLWTVRFLLVSFISFWALNE LRLSF        FLPS  SLHQS
Subjt:  MFFI-APLSFLDPSTFDLTTVFFIALILLLSLLSLSFIFHLRLKSRTSHHLQRFNSLWTVRFLLVSFISFWALNELLRLSFFRRRYLYPFLPSLPSLHQS

Query:  TLCQIHALLSLGLFQPCFLITLLFLINASAKNN-------------------TPHHY-TPFAFLLLASMPLFLLQVFIVFYSPFNHKLPPTFNQTYILIK
        TLCQIHALLSLGLFQPCFLI LLFLINAS  NN                   T H Y  P   LLL S+ +FLL + IVFYSPFNHKLPP+FNQ+Y+LIK
Subjt:  TLCQIHALLSLGLFQPCFLITLLFLINASAKNN-------------------TPHHY-TPFAFLLLASMPLFLLQVFIVFYSPFNHKLPPTFNQTYILIK

Query:  HDFNNTTVLCAYPLLSSIAFAAFAIGYMLCFFFSSWKVASMVINKSLRIRLYGLAFTVMISLPLQIIFLGLSALWRPDQPAYSVVSLVVFFSTFLCAAAG
        HD NNT V C+YPLLSSIAFAAFA+GYMLCFFFS+WKVASMVINKSLRIRL+ LAFTVMISL LQIIFLGLSALWRPD P YS++SL+VF S FLCA AG
Subjt:  HDFNNTTVLCAYPLLSSIAFAAFAIGYMLCFFFSSWKVASMVINKSLRIRLYGLAFTVMISLPLQIIFLGLSALWRPDQPAYSVVSLVVFFSTFLCAAAG

Query:  EGILVIVPIADSLAAGGDSRWEDSGQLLKTA
        EGILVIVPIADSLAA GDS +EDSG  LKTA
Subjt:  EGILVIVPIADSLAAGGDSRWEDSGQLLKTA

KAF3954763.1 hypothetical protein CMV_019938 [Castanea mollissima]

8.7e-85

57.81

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Query:  MFFIAPLSFLDPSTFDLTTVFFIALILLLSLLSLSFIFHLRLKSRTSHHLQRFNSLWTVRFLLVSFISFWALNELLRLSFFRRRYLYPFLPSLPSLHQST
        MFF  PL   D    D TT+ FIAL+LLLS+LSL FIFHLR KSRT +HLQ FNSLW+VRF+LV+FI FWALNELLR+ F+ RR+LYP LPS+   +Q++
Subjt:  MFFIAPLSFLDPSTFDLTTVFFIALILLLSLLSLSFIFHLRLKSRTSHHLQRFNSLWTVRFLLVSFISFWALNELLRLSFFRRRYLYPFLPSLPSLHQST

Query:  LCQIHALLSLGLFQPCFLITLLFLINASAKNNTPHHYTPFAFLLLASMPLFLLQVFIVFYSPFNHKLPPTFNQTYILIKHDFNNTTVLCAYPLLSSIAFA
        LC+IH +LSLG F+P FL+TLLFL+N S K         F F+L++  P+   QV  +F  P   KLP  F ++Y+++K  F N  VLC YPLLS+IAF 
Subjt:  LCQIHALLSLGLFQPCFLITLLFLINASAKNNTPHHYTPFAFLLLASMPLFLLQVFIVFYSPFNHKLPPTFNQTYILIKHDFNNTTVLCAYPLLSSIAFA

Query:  AFAIGYMLCFFFSSWKVASMVINKSLRIRLYGLAFTVMISLPLQIIFLGLSALWRPDQPAYSVVSLVVFFSTFLCAAAGEGILVIVPIADSLAAGGD-SR
        +F I Y LCF FS WK  S+ INKSLR+R+Y LA +V+ SL +QI+ LGLS+ W P++ AY  V+LVVF STFLCAA GEG+LVI PIAD+LAAGG+  R
Subjt:  AFAIGYMLCFFFSSWKVASMVINKSLRIRLYGLAFTVMISLPLQIIFLGLSALWRPDQPAYSVVSLVVFFSTFLCAAAGEGILVIVPIADSLAAGGD-SR

Query:  W
        W
Subjt:  W

KGN53609.1 hypothetical protein Csa_014834 [Cucumis sativus]

9.2e-127

80.31

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Query:  MFFI-APLSFLDPSTFDLTTVFFIALILLLSLLSLSFIFHLRLKSRTSHHLQRFNSLWTVRFLLVSFISFWALNELLRLSFFRRRYLYPFLPSLPSLHQS
        MFF+ A LSF+DP+TFDLTT+ FIALILLLSLLSLSFIFHLRLKSRTSHHLQRFNSLWTVRFLLVSFISFWALNELLRLSF        FLPSLPSLHQS
Subjt:  MFFI-APLSFLDPSTFDLTTVFFIALILLLSLLSLSFIFHLRLKSRTSHHLQRFNSLWTVRFLLVSFISFWALNELLRLSFFRRRYLYPFLPSLPSLHQS

Query:  TLCQIHALLSLGLFQPCFLITLLFLINASAKNNT---------PHHYTPFAFLLLASMPLFLLQVFIVFYSPFNHKLPPTFNQTYILIKHDFNNTTVLCA
        TLCQIH+LLSLGLFQPCFLI LLFLINAS  NN           HH+ P  FLLL S  +FLL + IVFYSPFNHKLPP+FNQ+Y+LIKHD NNT V C+
Subjt:  TLCQIHALLSLGLFQPCFLITLLFLINASAKNNT---------PHHYTPFAFLLLASMPLFLLQVFIVFYSPFNHKLPPTFNQTYILIKHDFNNTTVLCA

Query:  YPLLSSIAFAAFAIGYMLCFFFSSWKVASMVINKSLRIRLYGLAFTVMISLPLQIIFLGLSALWRPDQPAYSVVSLVVFFSTFLCAAAGEGILVIVPIAD
        YPLLSSIAFAAFA+GYMLCFFFS+WKVASMVINKSLRIRLY LAFTVMISLPLQIIFLGLSALWRPDQP YS++SL+VF S FLCA AGEGILVIVPIAD
Subjt:  YPLLSSIAFAAFAIGYMLCFFFSSWKVASMVINKSLRIRLYGLAFTVMISLPLQIIFLGLSALWRPDQPAYSVVSLVVFFSTFLCAAAGEGILVIVPIAD

Query:  SLAAGGDSRWEDSGQLLKTA
        SLAA GDS +EDSG  LKTA
Subjt:  SLAAGGDSRWEDSGQLLKTA

TYK19555.1 hypothetical protein E5676_scaffold416G00530 [Cucumis melo var. makuwa]

1.6e-118

75.08

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Query:  MFFI-APLSFLDPSTFDLTTVFFIALILLLSLLSLSFIFHLRLKSRTSHHLQRFNSLWTVRFLLVSFISFWALNELLRLSFFRRRYLYPFLPSLPSLHQS
        MFF+ A LSF+DP+TFDLTT+ FIALILLLSLLS+SFIFHL LKSRTSHHLQRFNSLWTVRFLLVSFISFWALNE LRLSF        FLPS  SLHQS
Subjt:  MFFI-APLSFLDPSTFDLTTVFFIALILLLSLLSLSFIFHLRLKSRTSHHLQRFNSLWTVRFLLVSFISFWALNELLRLSFFRRRYLYPFLPSLPSLHQS

Query:  TLCQIHALLSLGLFQPCFLITLLFLINASAKNN---------------------TPHHY-TPFAFLLLASMPLFLLQVFIVFYSPFNHKLPPTFNQTYIL
        TLCQIHALLSLGLFQPCFLI LLFLINAS  NN                     T H Y  P   LLL S+ +FLL + IVFYSPFNHKLPP+FNQ+Y+L
Subjt:  TLCQIHALLSLGLFQPCFLITLLFLINASAKNN---------------------TPHHY-TPFAFLLLASMPLFLLQVFIVFYSPFNHKLPPTFNQTYIL

Query:  IKHDFNNTTVLCAYPLLSSIAFAAFAIGYMLCFFFSSWKVASMVINKSLRIRLYGLAFTVMISLPLQIIFLGLSALWRPDQPAYSVVSLVVFFSTFLCAA
        IKHD NNT V C+YPLLSSIAFAAFA+GYMLCFFFS+WKVASMVINKSLRIRL+ LAFTVMISL LQIIFLGLSALWRPD P YS++SL+VF S FLCA 
Subjt:  IKHDFNNTTVLCAYPLLSSIAFAAFAIGYMLCFFFSSWKVASMVINKSLRIRLYGLAFTVMISLPLQIIFLGLSALWRPDQPAYSVVSLVVFFSTFLCAA

Query:  AGEGILVIVPIADSLAAGGDSRWEDSGQLLKTA
        AGEGILVIVPIADSLAA GDS +EDSG  LKTA
Subjt:  AGEGILVIVPIADSLAAGGDSRWEDSGQLLKTA

XP_023553121.1 uncharacterized protein LOC111810623 [Cucurbita pepo subsp. pepo]

8.9e-130

80.84

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Query:  MFFIAPLSFLDPSTFDLTTVFFIALILLLSLLSLSFIFHLRLKSRTSHHLQRFNSLWTVRFLLVSFISFWALNELLRLSFFRRRYLYPFLPSLPSLHQST
        MFFIAPLSFLDP+TFDLTT+ FI +ILLLSLLSLSFIFHL LKSRTSHHLQRFNSLWTVRFLLV+FI+ WALNELLRLSFFRRRYLYPFLPSL SLHQST
Subjt:  MFFIAPLSFLDPSTFDLTTVFFIALILLLSLLSLSFIFHLRLKSRTSHHLQRFNSLWTVRFLLVSFISFWALNELLRLSFFRRRYLYPFLPSLPSLHQST

Query:  LCQIHALLSLGLFQPCFLITLLFLINASAKNNTPHHYTPFAFLLLASMPLFLLQVFIVFYSPFNHKLPPTFNQTYILIKHDFNNTTVLCAYPLLSSIAFA
        LCQ+HAL SLGLFQPCFLITLL+LINASAKN TPH Y P AFLLL SMP+F L +FIVFY+PF  +LPP FNQ+Y++I+  F+N TVLCAYPLLSSIAF+
Subjt:  LCQIHALLSLGLFQPCFLITLLFLINASAKNNTPHHYTPFAFLLLASMPLFLLQVFIVFYSPFNHKLPPTFNQTYILIKHDFNNTTVLCAYPLLSSIAFA

Query:  AFAIGYMLCFFFSSWKVASMVINKSLRIRLYGLAFTVMISLPLQIIFLGLSALWRPDQPAYSVVSLVVFFSTFLCAAAGEGILVIVPIADSLAAGGDSRW
         F IGYMLCF FS WKVASMVINKSLRIR+Y LAFT++ISLP Q+IFLGLS LWRPD+PAYSV +LVVF  TFLCAAAGE ILVIVPIADSLAAGG SRW
Subjt:  AFAIGYMLCFFFSSWKVASMVINKSLRIRLYGLAFTVMISLPLQIIFLGLSALWRPDQPAYSVVSLVVFFSTFLCAAAGEGILVIVPIADSLAAGGDSRW

Query:  EDSGQLLK
          +G+ LK
Subjt:  EDSGQLLK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KXN9 Uncharacterized protein

4.5e-127

80.31

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Query:  MFFI-APLSFLDPSTFDLTTVFFIALILLLSLLSLSFIFHLRLKSRTSHHLQRFNSLWTVRFLLVSFISFWALNELLRLSFFRRRYLYPFLPSLPSLHQS
        MFF+ A LSF+DP+TFDLTT+ FIALILLLSLLSLSFIFHLRLKSRTSHHLQRFNSLWTVRFLLVSFISFWALNELLRLSF        FLPSLPSLHQS
Subjt:  MFFI-APLSFLDPSTFDLTTVFFIALILLLSLLSLSFIFHLRLKSRTSHHLQRFNSLWTVRFLLVSFISFWALNELLRLSFFRRRYLYPFLPSLPSLHQS

Query:  TLCQIHALLSLGLFQPCFLITLLFLINASAKNNT---------PHHYTPFAFLLLASMPLFLLQVFIVFYSPFNHKLPPTFNQTYILIKHDFNNTTVLCA
        TLCQIH+LLSLGLFQPCFLI LLFLINAS  NN           HH+ P  FLLL S  +FLL + IVFYSPFNHKLPP+FNQ+Y+LIKHD NNT V C+
Subjt:  TLCQIHALLSLGLFQPCFLITLLFLINASAKNNT---------PHHYTPFAFLLLASMPLFLLQVFIVFYSPFNHKLPPTFNQTYILIKHDFNNTTVLCA

Query:  YPLLSSIAFAAFAIGYMLCFFFSSWKVASMVINKSLRIRLYGLAFTVMISLPLQIIFLGLSALWRPDQPAYSVVSLVVFFSTFLCAAAGEGILVIVPIAD
        YPLLSSIAFAAFA+GYMLCFFFS+WKVASMVINKSLRIRLY LAFTVMISLPLQIIFLGLSALWRPDQP YS++SL+VF S FLCA AGEGILVIVPIAD
Subjt:  YPLLSSIAFAAFAIGYMLCFFFSSWKVASMVINKSLRIRLYGLAFTVMISLPLQIIFLGLSALWRPDQPAYSVVSLVVFFSTFLCAAAGEGILVIVPIAD

Query:  SLAAGGDSRWEDSGQLLKTA
        SLAA GDS +EDSG  LKTA
Subjt:  SLAAGGDSRWEDSGQLLKTA

A0A5A7UZP3 Uncharacterized protein

4.5e-119

75.53

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Query:  MFFI-APLSFLDPSTFDLTTVFFIALILLLSLLSLSFIFHLRLKSRTSHHLQRFNSLWTVRFLLVSFISFWALNELLRLSFFRRRYLYPFLPSLPSLHQS
        MFF+ A LSF+DP+TFDLTT+ FIALILLLSLLS+SFIFHL LKSRTSHHLQRFNSLWTVRFLLVSFISFWALNE LRLSF        FLPS  SLHQS
Subjt:  MFFI-APLSFLDPSTFDLTTVFFIALILLLSLLSLSFIFHLRLKSRTSHHLQRFNSLWTVRFLLVSFISFWALNELLRLSFFRRRYLYPFLPSLPSLHQS

Query:  TLCQIHALLSLGLFQPCFLITLLFLINASAKNN-------------------TPHHY-TPFAFLLLASMPLFLLQVFIVFYSPFNHKLPPTFNQTYILIK
        TLCQIHALLSLGLFQPCFLI LLFLINAS  NN                   T H Y  P   LLL S+ +FLL + IVFYSPFNHKLPP+FNQ+Y+LIK
Subjt:  TLCQIHALLSLGLFQPCFLITLLFLINASAKNN-------------------TPHHY-TPFAFLLLASMPLFLLQVFIVFYSPFNHKLPPTFNQTYILIK

Query:  HDFNNTTVLCAYPLLSSIAFAAFAIGYMLCFFFSSWKVASMVINKSLRIRLYGLAFTVMISLPLQIIFLGLSALWRPDQPAYSVVSLVVFFSTFLCAAAG
        HD NNT V C+YPLLSSIAFAAFA+GYMLCFFFS+WKVASMVINKSLRIRL+ LAFTVMISL LQIIFLGLSALWRPD P YS++SL+VF S FLCA AG
Subjt:  HDFNNTTVLCAYPLLSSIAFAAFAIGYMLCFFFSSWKVASMVINKSLRIRLYGLAFTVMISLPLQIIFLGLSALWRPDQPAYSVVSLVVFFSTFLCAAAG

Query:  EGILVIVPIADSLAAGGDSRWEDSGQLLKTA
        EGILVIVPIADSLAA GDS +EDSG  LKTA
Subjt:  EGILVIVPIADSLAAGGDSRWEDSGQLLKTA

A0A5D3D7N5 Uncharacterized protein

7.6e-119

75.08

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Query:  MFFI-APLSFLDPSTFDLTTVFFIALILLLSLLSLSFIFHLRLKSRTSHHLQRFNSLWTVRFLLVSFISFWALNELLRLSFFRRRYLYPFLPSLPSLHQS
        MFF+ A LSF+DP+TFDLTT+ FIALILLLSLLS+SFIFHL LKSRTSHHLQRFNSLWTVRFLLVSFISFWALNE LRLSF        FLPS  SLHQS
Subjt:  MFFI-APLSFLDPSTFDLTTVFFIALILLLSLLSLSFIFHLRLKSRTSHHLQRFNSLWTVRFLLVSFISFWALNELLRLSFFRRRYLYPFLPSLPSLHQS

Query:  TLCQIHALLSLGLFQPCFLITLLFLINASAKNN---------------------TPHHY-TPFAFLLLASMPLFLLQVFIVFYSPFNHKLPPTFNQTYIL
        TLCQIHALLSLGLFQPCFLI LLFLINAS  NN                     T H Y  P   LLL S+ +FLL + IVFYSPFNHKLPP+FNQ+Y+L
Subjt:  TLCQIHALLSLGLFQPCFLITLLFLINASAKNN---------------------TPHHY-TPFAFLLLASMPLFLLQVFIVFYSPFNHKLPPTFNQTYIL

Query:  IKHDFNNTTVLCAYPLLSSIAFAAFAIGYMLCFFFSSWKVASMVINKSLRIRLYGLAFTVMISLPLQIIFLGLSALWRPDQPAYSVVSLVVFFSTFLCAA
        IKHD NNT V C+YPLLSSIAFAAFA+GYMLCFFFS+WKVASMVINKSLRIRL+ LAFTVMISL LQIIFLGLSALWRPD P YS++SL+VF S FLCA 
Subjt:  IKHDFNNTTVLCAYPLLSSIAFAAFAIGYMLCFFFSSWKVASMVINKSLRIRLYGLAFTVMISLPLQIIFLGLSALWRPDQPAYSVVSLVVFFSTFLCAA

Query:  AGEGILVIVPIADSLAAGGDSRWEDSGQLLKTA
        AGEGILVIVPIADSLAA GDS +EDSG  LKTA
Subjt:  AGEGILVIVPIADSLAAGGDSRWEDSGQLLKTA

A0A6A5LTB3 Uncharacterized protein

9.1e-80

55.36

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Query:  STFDLTTVFFIALILLLSLLSLSFIFHLRLKSRTSHHLQRFNSLWTVRFLLVSFISFWALNELLRLSFFRRRYLYPFLPSLPSLHQSTLCQIHALLSLGL
        S FDLTTV FI+ +++LS+LSL FIFHLR KS++  HLQ FNS+WTVRFLLV FI FWA+ ELLRL FFRRRYLYPFLPS     Q  LC++H   SLG 
Subjt:  STFDLTTVFFIALILLLSLLSLSFIFHLRLKSRTSHHLQRFNSLWTVRFLLVSFISFWALNELLRLSFFRRRYLYPFLPSLPSLHQSTLCQIHALLSLGL

Query:  FQPCFLITLLFLINASAKNNTPHHYTPFAFLLLASMPLFLLQVFIVFYSPFNHKLPPTFNQTYILIKHDFNNTTVLCAYPLLSSIAFAAFAIGYMLCFFF
        F+P FL+TLLFL+NAS K  TP+     +F+L+  +P+  LQ F+++++P  +++P  F QT ++I   F + TVLC YP L+S+ FA F +GY L F  
Subjt:  FQPCFLITLLFLINASAKNNTPHHYTPFAFLLLASMPLFLLQVFIVFYSPFNHKLPPTFNQTYILIKHDFNNTTVLCAYPLLSSIAFAAFAIGYMLCFFF

Query:  SSWKVASMVINKSLRIRLYGLAFTVMISLPLQIIFLGLSALWRPDQPAYSVVSLVVFFSTFLCAAAGEGILVIVPIADSLAAGGD-SRW
        S W+V S+VINK LR+R+Y LA TV+++LPLQ++ LG +  W+PD+  Y VVSLV F   F CA  GEGILVI PI+D+L AGG   RW
Subjt:  SSWKVASMVINKSLRIRLYGLAFTVMISLPLQIIFLGLSALWRPDQPAYSVVSLVVFFSTFLCAAAGEGILVIVPIADSLAAGGD-SRW

A0A7N2MHV2 Uncharacterized protein

2.1e-84

57.48

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Query:  MFFIAPLSFLDPSTFDLTTVFFIALILLLSLLSLSFIFHLRLKSRTSHHLQRFNSLWTVRFLLVSFISFWALNELLRLSFFRRRYLYPFLPSLPSLHQST
        MFF  PL   D    D TT+ FIAL+LLLS+LSL FIFHLR KSRT +HLQ FNSLW VRF+LV+FI+ WALNELLR+ F  +R+LYP  PSL   +Q +
Subjt:  MFFIAPLSFLDPSTFDLTTVFFIALILLLSLLSLSFIFHLRLKSRTSHHLQRFNSLWTVRFLLVSFISFWALNELLRLSFFRRRYLYPFLPSLPSLHQST

Query:  LCQIHALLSLGLFQPCFLITLLFLINASAKNNTPHHYTPFAFLLLASMPLFLLQVFIVFYSPFNHKLPPTFNQTYILIKHDFNNTTVLCAYPLLSSIAFA
        LC+IH +LSLG F+P FL+TLLFL+N S K         F F+L++  P+   QV  VF  P   KLP  F +++++ K  F N  VLC YPLLS+IAF 
Subjt:  LCQIHALLSLGLFQPCFLITLLFLINASAKNNTPHHYTPFAFLLLASMPLFLLQVFIVFYSPFNHKLPPTFNQTYILIKHDFNNTTVLCAYPLLSSIAFA

Query:  AFAIGYMLCFFFSSWKVASMVINKSLRIRLYGLAFTVMISLPLQIIFLGLSALWRPDQPAYSVVSLVVFFSTFLCAAAGEGILVIVPIADSLAAGGD-SR
        +F I Y LCF FS WK  S+ INKSLR+R+Y LAF+V+ SL +QI+ LGLS+ W P++ AY  V+LVVF STFLCAA GEG+LVI PIAD+LAAGG+  R
Subjt:  AFAIGYMLCFFFSSWKVASMVINKSLRIRLYGLAFTVMISLPLQIIFLGLSALWRPDQPAYSVVSLVVFFSTFLCAAAGEGILVIVPIADSLAAGGD-SR

Query:  W
        W
Subjt:  W

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G57680.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP031277 (InterPro:IPR016971); Has 70 Blast hits to 70 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).

3.6e-28

31.6

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Query:  PLSFLDPSTFDLTTVFFIALILLLSLLSLSFIFHLRLKSRTSHHLQ--RFNSLWTVRFLLVSFISFWALNELLRLSFFRRRYLYPFLPSLPSLHQSTLCQ
        PL+ L P  F + T+  +AL++LL LL +++ F+ +   R   ++Q   F+  W +R   + F  +WA+ E+ RLS  RR      L  L    Q  +C+
Subjt:  PLSFLDPSTFDLTTVFFIALILLLSLLSLSFIFHLRLKSRTSHHLQ--RFNSLWTVRFLLVSFISFWALNELLRLSFFRRRYLYPFLPSLPSLHQSTLCQ

Query:  IHALLSLGLFQPCFLITLLFLINASAKNNT-----PHHYTPFAFLLLASMPLFLLQVFIVFY-------SPFNHKLPPTFNQTY--ILIKHDFNNTTVLC
         + + +LG  +PC  +TL+FL+ A  K  +       +     +++L  +P+  LQ+ +V         S    KLP  F +TY  ++I HD      LC
Subjt:  IHALLSLGLFQPCFLITLLFLINASAKNNT-----PHHYTPFAFLLLASMPLFLLQVFIVFY-------SPFNHKLPPTFNQTY--ILIKHDFNNTTVLC

Query:  AYPLLSSIAFAAFAIGYMLCFFFSSWKVASMVINKSLRIRLYGLAFTVMISLPLQIIFLGLSALWRPDQPAYSVVSLVVFFSTFLCAAAGEGILVIVPIA
         YPLLS+I    FA       F+   ++  +VINK L+ R+Y L F+V   LPL+I+ L LS L   D+  +  +S + F S F        +LV  P++
Subjt:  AYPLLSSIAFAAFAIGYMLCFFFSSWKVASMVINKSLRIRLYGLAFTVMISLPLQIIFLGLSALWRPDQPAYSVVSLVVFFSTFLCAAAGEGILVIVPIA

Query:  DSLAAGG
        DS+A  G
Subjt:  DSLAAGG

AT1G57680.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP031277 (InterPro:IPR016971); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

3.6e-28

31.6

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Query:  PLSFLDPSTFDLTTVFFIALILLLSLLSLSFIFHLRLKSRTSHHLQ--RFNSLWTVRFLLVSFISFWALNELLRLSFFRRRYLYPFLPSLPSLHQSTLCQ
        PL+ L P  F + T+  +AL++LL LL +++ F+ +   R   ++Q   F+  W +R   + F  +WA+ E+ RLS  RR      L  L    Q  +C+
Subjt:  PLSFLDPSTFDLTTVFFIALILLLSLLSLSFIFHLRLKSRTSHHLQ--RFNSLWTVRFLLVSFISFWALNELLRLSFFRRRYLYPFLPSLPSLHQSTLCQ

Query:  IHALLSLGLFQPCFLITLLFLINASAKNNT-----PHHYTPFAFLLLASMPLFLLQVFIVFY-------SPFNHKLPPTFNQTY--ILIKHDFNNTTVLC
         + + +LG  +PC  +TL+FL+ A  K  +       +     +++L  +P+  LQ+ +V         S    KLP  F +TY  ++I HD      LC
Subjt:  IHALLSLGLFQPCFLITLLFLINASAKNNT-----PHHYTPFAFLLLASMPLFLLQVFIVFY-------SPFNHKLPPTFNQTY--ILIKHDFNNTTVLC

Query:  AYPLLSSIAFAAFAIGYMLCFFFSSWKVASMVINKSLRIRLYGLAFTVMISLPLQIIFLGLSALWRPDQPAYSVVSLVVFFSTFLCAAAGEGILVIVPIA
         YPLLS+I    FA       F+   ++  +VINK L+ R+Y L F+V   LPL+I+ L LS L   D+  +  +S + F S F        +LV  P++
Subjt:  AYPLLSSIAFAAFAIGYMLCFFFSSWKVASMVINKSLRIRLYGLAFTVMISLPLQIIFLGLSALWRPDQPAYSVVSLVVFFSTFLCAAAGEGILVIVPIA

Query:  DSLAAGG
        DS+A  G
Subjt:  DSLAAGG

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTTCTTCATTGCTCCATTGTCTTTTCTAGATCCTTCTACCTTCGATCTCACCACCGTCTTTTTCATTGCCCTAATTCTCCTTCTCTCTCTCCTTTCCCTCTCCTTCAT
CTTCCACCTCCGTCTCAAGTCTCGTACCTCCCACCATCTCCAGCGCTTCAATTCCCTATGGACCGTTCGTTTCCTCCTCGTTTCCTTCATCTCCTTCTGGGCTCTCAATG
AACTCCTCCGCCTCTCCTTCTTCCGCCGCCGCTATCTCTACCCTTTCCTCCCTTCCCTTCCCTCCCTTCACCAATCCACTCTCTGCCAAATCCACGCCCTTCTCTCCCTT
GGCCTCTTCCAGCCTTGTTTTTTGATTACTCTTCTCTTTCTCATCAATGCCTCCGCTAAGAATAATACCCCTCACCATTATACCCCTTTTGCTTTCCTTCTTCTCGCTTC
CATGCCCCTTTTTCTTCTCCAGGTTTTTATCGTTTTCTATTCCCCTTTCAACCATAAACTTCCCCCAACCTTCAATCAGACCTACATTCTCATCAAGCATGATTTTAACA
ATACCACCGTCTTGTGCGCCTACCCTCTCTTGAGTTCCATTGCCTTCGCTGCCTTTGCTATTGGTTACATGCTCTGCTTCTTCTTCTCCTCCTGGAAAGTTGCATCCATG
GTCATCAATAAGTCTCTTCGGATTCGTCTTTACGGCCTCGCTTTCACCGTCATGATTTCCTTGCCCTTGCAGATTATATTCCTCGGCCTCTCCGCGCTCTGGAGGCCGGA
CCAGCCCGCTTATTCCGTCGTTTCGCTGGTTGTCTTTTTTAGTACGTTTCTATGCGCCGCTGCTGGGGAAGGCATTTTGGTCATTGTTCCCATCGCTGATTCCTTGGCCG
CCGGTGGAGACTCTCGGTGGGAAGATTCTGGTCAGCTTTTGAAGACCGCCGCGGCCGACGGTTGA

mRNA sequence

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Protein sequence

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MFFIAPLSFLDPSTFDLTTVFFIALILLLSLLSLSFIFHLRLKSRTSHHLQRFNSLWTVRFLLVSFISFWALNELLRLSFFRRRYLYPFLPSLPSLHQSTLCQIHALLSL
GLFQPCFLITLLFLINASAKNNTPHHYTPFAFLLLASMPLFLLQVFIVFYSPFNHKLPPTFNQTYILIKHDFNNTTVLCAYPLLSSIAFAAFAIGYMLCFFFSSWKVASM
VINKSLRIRLYGLAFTVMISLPLQIIFLGLSALWRPDQPAYSVVSLVVFFSTFLCAAAGEGILVIVPIADSLAAGGDSRWEDSGQLLKTAAADG

Lsi07G003130 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome