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Lsi07G003290 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G003290
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr07:3484238..3485101
RNA-Seq ExpressionLsi07G003290
SyntenyLsi07G003290
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056646.1 uncharacterized protein E6C27_scaffold288G001770 [Cucumis melo var. makuwa]4.8e-4978.06Show/hide
Query:  MGGCASKPKGMDLHPTEVPATPTDNKPQPQ----PAETISQGNNDGGESASTTLVDLSESNEPKQDEAGGDVEPEPAPVVPNDHKSTTPDVTHAEKVEAI
        MGGCASKPKGMDLHPTEVP TPT N+PQPQ      ETI+QGNNDGGE+ASTTLVDLS+S EPKQDEA GDV+ + AP V N  KSTTP++TH EKVE I
Subjt:  MGGCASKPKGMDLHPTEVPATPTDNKPQPQ----PAETISQGNNDGGESASTTLVDLSESNEPKQDEAGGDVEPEPAPVVPNDHKSTTPDVTHAEKVEAI

Query:  AKESEDKSEAIVGRNTQTKEGHPRTT-GADAAKSDATPTPTSEQYKTMAPIDVAI
        AKE+EDK+EAIV +NTQTKEGHPRTT GADAAKSDATPTPTSE +KTMAP+DVAI
Subjt:  AKESEDKSEAIVGRNTQTKEGHPRTT-GADAAKSDATPTPTSEQYKTMAPIDVAI
TYK04607.1 uncharacterized protein E5676_scaffold351G00110 [Cucumis melo var. makuwa]5.7e-5078.71Show/hide
Query:  MGGCASKPKGMDLHPTEVPATPTDNKPQPQ----PAETISQGNNDGGESASTTLVDLSESNEPKQDEAGGDVEPEPAPVVPNDHKSTTPDVTHAEKVEAI
        MGGCASKPKGMDLHPTEVP TPT N+PQPQ      ETI+QGNNDGGE+ASTTLVDLS+S EPKQDEA GDV+ + AP VPN  KSTTP++TH EKVE I
Subjt:  MGGCASKPKGMDLHPTEVPATPTDNKPQPQ----PAETISQGNNDGGESASTTLVDLSESNEPKQDEAGGDVEPEPAPVVPNDHKSTTPDVTHAEKVEAI

Query:  AKESEDKSEAIVGRNTQTKEGHPRTT-GADAAKSDATPTPTSEQYKTMAPIDVAI
        AKE+EDK+EAIV +NTQTKEGHPRTT GADAAKSDATPTPTSE +KTMAP+DVAI
Subjt:  AKESEDKSEAIVGRNTQTKEGHPRTT-GADAAKSDATPTPTSEQYKTMAPIDVAI
XP_011653400.1 uncharacterized protein LOC105435210 [Cucumis sativus]2.0e-4778.15Show/hide
Query:  MGGCASKPKGMDLHPTEVPATPTDNKPQPQPAETISQGNNDGGESASTTLVDLSESNEPKQDEAGGDVEPEPAPVVPNDHKSTTPDVTHAEKVEAIAKES
        MGGCASKPKGMDLHP+EV ATPT NKPQ Q  E ++QGNNDGG+SASTTLVDLS+SNE KQD+AGGDVE EPA  VPN  KST  ++T AEKVE IAKES
Subjt:  MGGCASKPKGMDLHPTEVPATPTDNKPQPQPAETISQGNNDGGESASTTLVDLSESNEPKQDEAGGDVEPEPAPVVPNDHKSTTPDVTHAEKVEAIAKES

Query:  EDKSEAIVGRNTQTKEGHPR-TTGADAAKSDATPTPTSEQYKTMAPIDVAI
        EDKSEAIV +NTQTKEGHPR T GADAAK DATPTPTSE  K MAP+DVAI
Subjt:  EDKSEAIVGRNTQTKEGHPR-TTGADAAKSDATPTPTSEQYKTMAPIDVAI
XP_038875809.1 uncharacterized protein LOC120068172 [Benincasa hispida]1.3e-5786Show/hide
Query:  MGGCASKPKGMDLHPTEVPATPTDNKPQPQPAETISQGNNDGGESASTTLVDLSESNEPKQDEAGGDVEPEPAPVVPNDHKSTTPDVTHAEKVEAIAKES
        MGGCASKPKGMDLHP EVPATPTD KPQPQ AETISQGNNDGGESASTTLVDLSESNEPKQDEAGGDVEPEPAP VPN HKSTTP++TH EKVEAIAKES
Subjt:  MGGCASKPKGMDLHPTEVPATPTDNKPQPQPAETISQGNNDGGESASTTLVDLSESNEPKQDEAGGDVEPEPAPVVPNDHKSTTPDVTHAEKVEAIAKES

Query:  EDKSEAIVGRNTQTKEGHPRTTGADAAKSDATPTPTSEQYKTMAPIDVAI
        ED        N QTKEGHPRTT ADAAKSDATPTPTSE +KTMAP+DVAI
Subjt:  EDKSEAIVGRNTQTKEGHPRTTGADAAKSDATPTPTSEQYKTMAPIDVAI
TrEMBL top hitse value%identityAlignment
A0A0A0KVU8 Uncharacterized protein9.8e-4878.15Show/hide
Query:  MGGCASKPKGMDLHPTEVPATPTDNKPQPQPAETISQGNNDGGESASTTLVDLSESNEPKQDEAGGDVEPEPAPVVPNDHKSTTPDVTHAEKVEAIAKES
        MGGCASKPKGMDLHP+EV ATPT NKPQ Q  E ++QGNNDGG+SASTTLVDLS+SNE KQD+AGGDVE EPA  VPN  KST  ++T AEKVE IAKES
Subjt:  MGGCASKPKGMDLHPTEVPATPTDNKPQPQPAETISQGNNDGGESASTTLVDLSESNEPKQDEAGGDVEPEPAPVVPNDHKSTTPDVTHAEKVEAIAKES

Query:  EDKSEAIVGRNTQTKEGHPR-TTGADAAKSDATPTPTSEQYKTMAPIDVAI
        EDKSEAIV +NTQTKEGHPR T GADAAK DATPTPTSE  K MAP+DVAI
Subjt:  EDKSEAIVGRNTQTKEGHPR-TTGADAAKSDATPTPTSEQYKTMAPIDVAI
A0A5A7UQQ8 Uncharacterized protein2.3e-4978.06Show/hide
Query:  MGGCASKPKGMDLHPTEVPATPTDNKPQPQ----PAETISQGNNDGGESASTTLVDLSESNEPKQDEAGGDVEPEPAPVVPNDHKSTTPDVTHAEKVEAI
        MGGCASKPKGMDLHPTEVP TPT N+PQPQ      ETI+QGNNDGGE+ASTTLVDLS+S EPKQDEA GDV+ + AP V N  KSTTP++TH EKVE I
Subjt:  MGGCASKPKGMDLHPTEVPATPTDNKPQPQ----PAETISQGNNDGGESASTTLVDLSESNEPKQDEAGGDVEPEPAPVVPNDHKSTTPDVTHAEKVEAI

Query:  AKESEDKSEAIVGRNTQTKEGHPRTT-GADAAKSDATPTPTSEQYKTMAPIDVAI
        AKE+EDK+EAIV +NTQTKEGHPRTT GADAAKSDATPTPTSE +KTMAP+DVAI
Subjt:  AKESEDKSEAIVGRNTQTKEGHPRTT-GADAAKSDATPTPTSEQYKTMAPIDVAI
A0A5D3BYJ6 Uncharacterized protein2.8e-5078.71Show/hide
Query:  MGGCASKPKGMDLHPTEVPATPTDNKPQPQ----PAETISQGNNDGGESASTTLVDLSESNEPKQDEAGGDVEPEPAPVVPNDHKSTTPDVTHAEKVEAI
        MGGCASKPKGMDLHPTEVP TPT N+PQPQ      ETI+QGNNDGGE+ASTTLVDLS+S EPKQDEA GDV+ + AP VPN  KSTTP++TH EKVE I
Subjt:  MGGCASKPKGMDLHPTEVPATPTDNKPQPQ----PAETISQGNNDGGESASTTLVDLSESNEPKQDEAGGDVEPEPAPVVPNDHKSTTPDVTHAEKVEAI

Query:  AKESEDKSEAIVGRNTQTKEGHPRTT-GADAAKSDATPTPTSEQYKTMAPIDVAI
        AKE+EDK+EAIV +NTQTKEGHPRTT GADAAKSDATPTPTSE +KTMAP+DVAI
Subjt:  AKESEDKSEAIVGRNTQTKEGHPRTT-GADAAKSDATPTPTSEQYKTMAPIDVAI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGGTTGTGCGAGCAAACCCAAGGGTATGGATCTCCACCCAACCGAGGTTCCCGCCACACCCACAGACAATAAGCCCCAGCCCCAGCCAGCTGAGACCATTTCCCA
GGGAAATAATGATGGAGGTGAGAGTGCATCAACAACATTGGTGGACCTGTCCGAGTCCAACGAACCAAAACAGGACGAAGCTGGTGGAGATGTTGAGCCCGAGCCCGCCC
CTGTAGTTCCTAATGATCATAAATCAACTACTCCCGACGTTACCCATGCCGAGAAAGTCGAAGCCATTGCAAAAGAATCAGAGGACAAGAGTGAGGCTATTGTCGGCCGG
AACACCCAGACCAAGGAGGGCCACCCTAGGACGACTGGTGCCGACGCTGCCAAATCAGATGCCACTCCAACTCCAACCTCTGAACAGTACAAAACCATGGCACCCATTGA
TGTAGCGATCTAA
mRNA sequenceShow/hide mRNA sequence
GATCATTCTCATCGCATCAATATATTTTGAGCCCTTTTGAGTTCGTGTGTGTAAATTGGTTTTAATCTCCCACCTCCACCAGGCTCGCATTAGTCCCAACCAACTTTATT
TTTCCACAATGGGAGGTTGTGCGAGCAAACCCAAGGGTATGGATCTCCACCCAACCGAGGTTCCCGCCACACCCACAGACAATAAGCCCCAGCCCCAGCCAGCTGAGACC
ATTTCCCAGGGAAATAATGATGGAGGTGAGAGTGCATCAACAACATTGGTGGACCTGTCCGAGTCCAACGAACCAAAACAGGACGAAGCTGGTGGAGATGTTGAGCCCGA
GCCCGCCCCTGTAGTTCCTAATGATCATAAATCAACTACTCCCGACGTTACCCATGCCGAGAAAGTCGAAGCCATTGCAAAAGAATCAGAGGACAAGAGTGAGGCTATTG
TCGGCCGGAACACCCAGACCAAGGAGGGCCACCCTAGGACGACTGGTGCCGACGCTGCCAAATCAGATGCCACTCCAACTCCAACCTCTGAACAGTACAAAACCATGGCA
CCCATTGATGTAGCGATCTAACCCATACTTTTCATTTATTTTTATATACATTCAACTCATCCATATATCTATCAACTTCCATCTATCTTTCTATTCATTTCTCCAAATCA
GCCAACAATTCTTAATTATATATATTATTCATCCTCTTCTAATTATTAATTAACTTTAATTGTTCTAATTACGTAATAAACTACATCTTTTTATTTTTCTC
Protein sequenceShow/hide protein sequence
MGGCASKPKGMDLHPTEVPATPTDNKPQPQPAETISQGNNDGGESASTTLVDLSESNEPKQDEAGGDVEPEPAPVVPNDHKSTTPDVTHAEKVEAIAKESEDKSEAIVGR
NTQTKEGHPRTTGADAAKSDATPTPTSEQYKTMAPIDVAI