CuGenDBv2

Gene ID	Lsi07G003370
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	54S ribosomal protein L51, mitochondrial-like
Genome location	chr07:3566982..3569664
RNA-Seq Expression	Lsi07G003370
Synteny	Lsi07G003370
Gene Ontology terms	GO:0032543 - mitochondrial translation (biological process) GO:0005762 - mitochondrial large ribosomal subunit (cellular component) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR007741 - Ribosomal protein/NADH dehydrogenase domain IPR036249 - Thioredoxin-like superfamily IPR039927 - 39S ribosomal protein L43/54S ribosomal protein L51

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004152128.1 54S ribosomal protein L51, mitochondrial [Cucumis sativus]

3.4e-55

73.33

Show/hide

Query:  MALRGVWQLKKLVVSYCDWGGSSKGIRFVGLLNYYLLDYFTTKCVMQNRVKIRVLGVWAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKGFYKSNNHRV
        MALRGVWQLKKLVVSYCDWGGSS+GIR                               AFM+SQ+PAFKEKNPQLEVVTELIRGQHPHLKGF++SNN+RV
Subjt:  MALRGVWQLKKLVVSYCDWGGSSKGIRFVGLLNYYLLDYFTTKCVMQNRVKIRVLGVWAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKGFYKSNNHRV

Query:  VCVKNLDPEEIHLCAMRLRNALGRKVVKLRTRHVTKNPSVQGTWNTDVRF
        VCVKN+DPEEIH CAMRLRN+LGRKVVKLRTRHVTKNPSVQGTWNTDVRF
Subjt:  VCVKNLDPEEIHLCAMRLRNALGRKVVKLRTRHVTKNPSVQGTWNTDVRF

XP_008454040.1 PREDICTED: 54S ribosomal protein L51, mitochondrial [Cucumis melo]

8.5e-54

72.67

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Query:  MALRGVWQLKKLVVSYCDWGGSSKGIRFVGLLNYYLLDYFTTKCVMQNRVKIRVLGVWAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKGFYKSNNHRV
        MALRGVWQLKKLVVSYCDWGGSS+GIR                               AFM+SQ+PAFKEKNPQLEVVTEL RGQHP+LKGFYKSNN+RV
Subjt:  MALRGVWQLKKLVVSYCDWGGSSKGIRFVGLLNYYLLDYFTTKCVMQNRVKIRVLGVWAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKGFYKSNNHRV

Query:  VCVKNLDPEEIHLCAMRLRNALGRKVVKLRTRHVTKNPSVQGTWNTDVRF
        VCVKN+DPEEIH CA RLRN+LGRKVVKLRTRHVTKNPSVQGTWNTDVRF
Subjt:  VCVKNLDPEEIHLCAMRLRNALGRKVVKLRTRHVTKNPSVQGTWNTDVRF

XP_022158383.1 54S ribosomal protein L51, mitochondrial [Momordica charantia]

1.9e-53

72.67

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Query:  MALRGVWQLKKLVVSYCDWGGSSKGIRFVGLLNYYLLDYFTTKCVMQNRVKIRVLGVWAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKGFYKSNNHRV
        MALRGVWQL+KL+VSYCDWGGSS+GIR                               AFMDSQLPAFKEKNPQLEVVTELIRGQHPHLK FYK+NN RV
Subjt:  MALRGVWQLKKLVVSYCDWGGSSKGIRFVGLLNYYLLDYFTTKCVMQNRVKIRVLGVWAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKGFYKSNNHRV

Query:  VCVKNLDPEEIHLCAMRLRNALGRKVVKLRTRHVTKNPSVQGTWNTDVRF
        VCVKNLDPEEI+L A+RLRNALGRKV+KLRTRHVTKNPSVQGTWNTDVRF
Subjt:  VCVKNLDPEEIHLCAMRLRNALGRKVVKLRTRHVTKNPSVQGTWNTDVRF

XP_022979453.1 54S ribosomal protein L51, mitochondrial-like [Cucurbita maxima]

6.5e-54

70.67

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Query:  MALRGVWQLKKLVVSYCDWGGSSKGIRFVGLLNYYLLDYFTTKCVMQNRVKIRVLGVWAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKGFYKSNNHRV
        MALRGVWQLKKL+VSYCDWGGSS+GIR                               AFMDS+LPAF+EKNPQL++VTELIRGQHPHLKGFYKSNNHRV
Subjt:  MALRGVWQLKKLVVSYCDWGGSSKGIRFVGLLNYYLLDYFTTKCVMQNRVKIRVLGVWAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKGFYKSNNHRV

Query:  VCVKNLDPEEIHLCAMRLRNALGRKVVKLRTRHVTKNPSVQGTWNTDVRF
        +CVKN+DPE+IHL A RLRNALGRKV+KLRTRHVTKNPS QGTWNTDVRF
Subjt:  VCVKNLDPEEIHLCAMRLRNALGRKVVKLRTRHVTKNPSVQGTWNTDVRF

XP_038877046.1 54S ribosomal protein L51, mitochondrial [Benincasa hispida]

9.7e-58

77.33

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Query:  MALRGVWQLKKLVVSYCDWGGSSKGIRFVGLLNYYLLDYFTTKCVMQNRVKIRVLGVWAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKGFYKSNNHRV
        MALRGVWQLKKLVVSYCDWGGSS+GIR                               AFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKGFYKSNN+RV
Subjt:  MALRGVWQLKKLVVSYCDWGGSSKGIRFVGLLNYYLLDYFTTKCVMQNRVKIRVLGVWAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKGFYKSNNHRV

Query:  VCVKNLDPEEIHLCAMRLRNALGRKVVKLRTRHVTKNPSVQGTWNTDVRF
        VCVKN+DPEEIHLCAMRLRNALGRKVVKLRTRHVTKNPSVQGTWNTDVRF
Subjt:  VCVKNLDPEEIHLCAMRLRNALGRKVVKLRTRHVTKNPSVQGTWNTDVRF

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KU37 L51_S25_CI-B8 domain-containing protein

1.7e-55

73.33

Show/hide

Query:  MALRGVWQLKKLVVSYCDWGGSSKGIRFVGLLNYYLLDYFTTKCVMQNRVKIRVLGVWAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKGFYKSNNHRV
        MALRGVWQLKKLVVSYCDWGGSS+GIR                               AFM+SQ+PAFKEKNPQLEVVTELIRGQHPHLKGF++SNN+RV
Subjt:  MALRGVWQLKKLVVSYCDWGGSSKGIRFVGLLNYYLLDYFTTKCVMQNRVKIRVLGVWAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKGFYKSNNHRV

Query:  VCVKNLDPEEIHLCAMRLRNALGRKVVKLRTRHVTKNPSVQGTWNTDVRF
        VCVKN+DPEEIH CAMRLRN+LGRKVVKLRTRHVTKNPSVQGTWNTDVRF
Subjt:  VCVKNLDPEEIHLCAMRLRNALGRKVVKLRTRHVTKNPSVQGTWNTDVRF

A0A1S3BXU0 54S ribosomal protein L51, mitochondrial

4.1e-54

72.67

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Query:  MALRGVWQLKKLVVSYCDWGGSSKGIRFVGLLNYYLLDYFTTKCVMQNRVKIRVLGVWAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKGFYKSNNHRV
        MALRGVWQLKKLVVSYCDWGGSS+GIR                               AFM+SQ+PAFKEKNPQLEVVTEL RGQHP+LKGFYKSNN+RV
Subjt:  MALRGVWQLKKLVVSYCDWGGSSKGIRFVGLLNYYLLDYFTTKCVMQNRVKIRVLGVWAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKGFYKSNNHRV

Query:  VCVKNLDPEEIHLCAMRLRNALGRKVVKLRTRHVTKNPSVQGTWNTDVRF
        VCVKN+DPEEIH CA RLRN+LGRKVVKLRTRHVTKNPSVQGTWNTDVRF
Subjt:  VCVKNLDPEEIHLCAMRLRNALGRKVVKLRTRHVTKNPSVQGTWNTDVRF

A0A6J1DVX7 54S ribosomal protein L51, mitochondrial

9.2e-54

72.67

Show/hide

Query:  MALRGVWQLKKLVVSYCDWGGSSKGIRFVGLLNYYLLDYFTTKCVMQNRVKIRVLGVWAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKGFYKSNNHRV
        MALRGVWQL+KL+VSYCDWGGSS+GIR                               AFMDSQLPAFKEKNPQLEVVTELIRGQHPHLK FYK+NN RV
Subjt:  MALRGVWQLKKLVVSYCDWGGSSKGIRFVGLLNYYLLDYFTTKCVMQNRVKIRVLGVWAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKGFYKSNNHRV

Query:  VCVKNLDPEEIHLCAMRLRNALGRKVVKLRTRHVTKNPSVQGTWNTDVRF
        VCVKNLDPEEI+L A+RLRNALGRKV+KLRTRHVTKNPSVQGTWNTDVRF
Subjt:  VCVKNLDPEEIHLCAMRLRNALGRKVVKLRTRHVTKNPSVQGTWNTDVRF

A0A6J1IW90 54S ribosomal protein L51, mitochondrial-like

3.1e-54

70.67

Show/hide

Query:  MALRGVWQLKKLVVSYCDWGGSSKGIRFVGLLNYYLLDYFTTKCVMQNRVKIRVLGVWAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKGFYKSNNHRV
        MALRGVWQLKKL+VSYCDWGGSS+GIR                               AFMDS+LPAF+EKNPQL++VTELIRGQHPHLKGFYKSNNHRV
Subjt:  MALRGVWQLKKLVVSYCDWGGSSKGIRFVGLLNYYLLDYFTTKCVMQNRVKIRVLGVWAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKGFYKSNNHRV

Query:  VCVKNLDPEEIHLCAMRLRNALGRKVVKLRTRHVTKNPSVQGTWNTDVRF
        +CVKN+DPE+IHL A RLRNALGRKV+KLRTRHVTKNPS QGTWNTDVRF
Subjt:  VCVKNLDPEEIHLCAMRLRNALGRKVVKLRTRHVTKNPSVQGTWNTDVRF

A0A7J9HTW2 L51_S25_CI-B8 domain-containing protein

7.8e-53

71.33

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Query:  MALRGVWQLKKLVVSYCDWGGSSKGIRFVGLLNYYLLDYFTTKCVMQNRVKIRVLGVWAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKGFYKSNNHRV
        MALRGVWQLKKL+VSYCDWGGSS+GIR    L + LL+      ++ N     +L  WAFM+S+LP FKEKNPQLEVVTELIRGQHPHLKGFYK+ N RV
Subjt:  MALRGVWQLKKLVVSYCDWGGSSKGIRFVGLLNYYLLDYFTTKCVMQNRVKIRVLGVWAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKGFYKSNNHRV

Query:  VCVKNLDPEEIHLCAMRLRNALGRKVVKLRTRHVTKNPSVQGTWNTDVRF
        VCVKN+ PE+I L A RLRNALGRKVVKL+TRHVTK+PSVQGTW TDV+F
Subjt:  VCVKNLDPEEIHLCAMRLRNALGRKVVKLRTRHVTKNPSVQGTWNTDVRF

SwissProt top hits

e value

%identity

Alignment

Q758S3 54S ribosomal protein L51, mitochondrial

8.6e-09

27.21

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Query:  VWQLKKLVVSYCDWGGSSKGIRFVGLLNYYLLDYFTTKCVMQNRVKIRVLGVWAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKGFYKSNNHRVVCVKN
        ++  KK+ + YC+WGGSS+G+R          D+ T+K                    +L  + EK PQ++    + +  HP LK  Y +  ++ +CV+N
Subjt:  VWQLKKLVVSYCDWGGSSKGIRFVGLLNYYLLDYFTTKCVMQNRVKIRVLGVWAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKGFYKSNNHRVVCVKN

Query:  LDPEEIHLCAMRLRNALGRKVVKLRTRHVTK-------NPSVQGTWN
        L+ + + L    LR + G ++     RH  K       N SV+G W+
Subjt:  LDPEEIHLCAMRLRNALGRKVVKLRTRHVTK-------NPSVQGTWN

Q9UUC8 54S ribosomal protein L51, mitochondrial

5.6e-08

22.06

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Query:  KKLVVSYCDWGGSSKGIRFVGLLNYYLLDYFTTKCVMQNRVKIRVLGVWAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKGFYKSNNHRVVCVKNLDPE
        +++  SYC+WGGSSKG++                                F+ ++L +  +++  +E      +G+HP ++ +Y +   +V+C + +   
Subjt:  KKLVVSYCDWGGSSKGIRFVGLLNYYLLDYFTTKCVMQNRVKIRVLGVWAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKGFYKSNNHRVVCVKNLDPE

Query:  EIHLCAMRLRNALGRKVVKLRTRHVTKNPSVQGTWN
         I   A+  R++ G K   ++    + NPSV+G W+
Subjt:  EIHLCAMRLRNALGRKVVKLRTRHVTKNPSVQGTWN

Arabidopsis top hits

e value

%identity

Alignment

AT3G59650.1 mitochondrial ribosomal protein L51/S25/CI-B8 family protein

1.4e-49

Show/hide

Query:  MALRGVWQLKKLVVSYCDWGGSSKGIRFVGLLNYYLLDYFTTKCVMQNRVKIRVLGVWAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKGFYKSNNHRV
        MALRGVWQLKKLVVSYC+WGGSS+GIR                               AFM+S+LPA KEKNPQLEV+TEL RGQHP+LKG Y++ N RV
Subjt:  MALRGVWQLKKLVVSYCDWGGSSKGIRFVGLLNYYLLDYFTTKCVMQNRVKIRVLGVWAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKGFYKSNNHRV

Query:  VCVKNLDPEEIHLCAMRLRNALGRKVVKLRTRHVTKNPSVQGTWNTDVRF
        VCVKN+DPEE+ L A RLRN+LGRKVVKLRTRHVTK+PSVQGTW T V+F
Subjt:  VCVKNLDPEEIHLCAMRLRNALGRKVVKLRTRHVTKNPSVQGTWNTDVRF

AT3G59650.2 mitochondrial ribosomal protein L51/S25/CI-B8 family protein

5.9e-45

54.24

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Query:  MALRGVWQLKKLVVSYCDWGGSSKGIRFVGLLNYYLLDYFTTKCVMQNRVKIRVLGVWAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKGFYK------
        MALRGVWQLKKLVVSYC+WGGSS+GIR                               AFM+S+LPA KEKNPQLEV+TEL RGQHP+LKG Y       
Subjt:  MALRGVWQLKKLVVSYCDWGGSSKGIRFVGLLNYYLLDYFTTKCVMQNRVKIRVLGVWAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKGFYK------

Query:  ---------------------SNNHRVVCVKNLDPEEIHLCAMRLRNALGRKVVKLRTRHVTKNPSVQGTWNTDVRF
                             + N RVVCVKN+DPEE+ L A RLRN+LGRKVVKLRTRHVTK+PSVQGTW T V+F
Subjt:  ---------------------SNNHRVVCVKNLDPEEIHLCAMRLRNALGRKVVKLRTRHVTKNPSVQGTWNTDVRF

Sequences

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CDS sequence

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mRNA sequence

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ATGGCTTTGCGAGGTGTTTGGCAGCTTAAGAAGCTGGTTGTCAGCTATTGCGATTGGGGAGGAAGCAGCAAGGGTATCAGGTTTGTTGGATTGCTAAACTATTATCTACT
AGATTATTTCACTACTAAATGCGTTATGCAAAACAGGGTGAAGATAAGGGTTCTTGGAGTGTGGGCATTTATGGACTCGCAATTGCCAGCTTTTAAGGAGAAAAATCCTC
AGCTAGAAGTAGTTACTGAACTCATTCGTGGTCAGCATCCACACTTGAAGGGCTTCTACAAAAGCAATAATCATCGTGTGGTATGTGTGAAGAACTTGGATCCGGAAGAA
ATACATTTATGTGCAATGAGACTAAGGAATGCACTGGGACGAAAGGTCGTAAAACTGAGGACAAGACATGTAACCAAAAATCCTAGTGTGCAAGGTACCTGGAACACTGA
TGTAAGATTTTGAAGCCTAAAGAGCTTGATTTCGTTTGGAGGTTGTTTTTTCCATCAATAATAAGATGTTGAAACCAAACTTCTTTCATAGAATAGCTTGAGTTTGTTGT
TTGTAGTGAGTAGTATGTAACTTTTGAGGTTGTTACTGTTCCAGTGCTCTGAACACTCTCTCTGGAGAAAGATTTTCCATGAAACATGAGCTCATTTTGAGGAATACATG
AAACAGAAAAGGATTCTGATTTGATTTGCCAACTTCTTGTTCTAAACATTAAAAGTTGCAACAATAATTGAAATGGGCCTTCGTATTATTCATCAAGCGAGAATGCCCCA
AGAGTAATTTTATAGCTATTCCGGACATGGTTTTTTTTAATAGTTC

Protein sequence

Show/hide protein sequence

MALRGVWQLKKLVVSYCDWGGSSKGIRFVGLLNYYLLDYFTTKCVMQNRVKIRVLGVWAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKGFYKSNNHRVVCVKNLDPEE
IHLCAMRLRNALGRKVVKLRTRHVTKNPSVQGTWNTDVRF

Lsi07G003370 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome