; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi07G003500 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G003500
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionmembrane-associated 30 kDa protein, chloroplastic
Genome locationchr07:3729953..3748608
RNA-Seq ExpressionLsi07G003500
SyntenyLsi07G003500
Gene Ontology termsGO:0010027 - thylakoid membrane organization (biological process)
GO:0016020 - membrane (cellular component)
InterPro domainsIPR007157 - PspA/IM30


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7018428.1 Membrane-associated 30 kDa protein, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]1.8e-9377.21Show/hide
Query:  RGGALGARMNLFDRFARVIKSYANALVSSFEDPEKILEQTVLEMNDDLTKMRQATAQ-------------------------------------------
        RGGALGARMNLFDRFARV+KSYANALVSSFEDPEKILEQTVLEMNDDLTKMRQATAQ                                           
Subjt:  RGGALGARMNLFDRFARVIKSYANALVSSFEDPEKILEQTVLEMNDDLTKMRQATAQ-------------------------------------------

Query:  ------DNANALKAQLDQQKSVVENLVSNTRVANMIRIRTESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQAEAL
              DNAN+LKAQLDQQK+VVENLVSNTR+        ESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKV+AMESQAEAL
Subjt:  ------DNANALKAQLDQQKSVVENLVSNTRVANMIRIRTESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQAEAL

Query:  GQLTADDLEGKFALLEGSSVDDELANLKKELSGSSKKGELPPGRTVSGSAFPVRDAEIESELNELRQKAREL
        GQLTADDLEGKFALLEGSSVDDELANLKKELSGSSKKGELPPGRTVSGSAFPVRDAEIESELNELRQKAREL
Subjt:  GQLTADDLEGKFALLEGSSVDDELANLKKELSGSSKKGELPPGRTVSGSAFPVRDAEIESELNELRQKAREL

XP_022955518.1 membrane-associated 30 kDa protein, chloroplastic [Cucurbita moschata]1.8e-9377.21Show/hide
Query:  RGGALGARMNLFDRFARVIKSYANALVSSFEDPEKILEQTVLEMNDDLTKMRQATAQ-------------------------------------------
        RGGALGARMNLFDRFARV+KSYANALVSSFEDPEKILEQTVLEMNDDLTKMRQATAQ                                           
Subjt:  RGGALGARMNLFDRFARVIKSYANALVSSFEDPEKILEQTVLEMNDDLTKMRQATAQ-------------------------------------------

Query:  ------DNANALKAQLDQQKSVVENLVSNTRVANMIRIRTESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQAEAL
              DNAN+LKAQLDQQK+VVENLVSNTR+        ESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKV+AMESQAEAL
Subjt:  ------DNANALKAQLDQQKSVVENLVSNTRVANMIRIRTESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQAEAL

Query:  GQLTADDLEGKFALLEGSSVDDELANLKKELSGSSKKGELPPGRTVSGSAFPVRDAEIESELNELRQKAREL
        GQLTADDLEGKFALLEGSSVDDELANLKKELSGSSKKGELPPGRTVSGSAFPVRDAEIESELNELRQKAREL
Subjt:  GQLTADDLEGKFALLEGSSVDDELANLKKELSGSSKKGELPPGRTVSGSAFPVRDAEIESELNELRQKAREL

XP_022979446.1 membrane-associated 30 kDa protein, chloroplastic-like [Cucurbita maxima]3.0e-9376.84Show/hide
Query:  RGGALGARMNLFDRFARVIKSYANALVSSFEDPEKILEQTVLEMNDDLTKMRQATAQ-------------------------------------------
        RGGALGARMNLFDRFARV+KSYANALVSSFEDPEKILEQTVLEMNDDLTKMRQATAQ                                           
Subjt:  RGGALGARMNLFDRFARVIKSYANALVSSFEDPEKILEQTVLEMNDDLTKMRQATAQ-------------------------------------------

Query:  ------DNANALKAQLDQQKSVVENLVSNTRVANMIRIRTESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQAEAL
              DNAN+LKAQLDQQK+VVENLVSNTR+        ESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKV+AMESQAEAL
Subjt:  ------DNANALKAQLDQQKSVVENLVSNTRVANMIRIRTESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQAEAL

Query:  GQLTADDLEGKFALLEGSSVDDELANLKKELSGSSKKGELPPGRTVSGSAFPVRDAEIESELNELRQKAREL
        GQLTADDLEGKFALLEGSSVDDELANLKKELSGSSKKGELPPGRTVSGSAFPVRDAEIESELNELRQKARE+
Subjt:  GQLTADDLEGKFALLEGSSVDDELANLKKELSGSSKKGELPPGRTVSGSAFPVRDAEIESELNELRQKAREL

XP_023528686.1 membrane-associated 30 kDa protein, chloroplastic-like [Cucurbita pepo subsp. pepo]1.8e-9377.21Show/hide
Query:  RGGALGARMNLFDRFARVIKSYANALVSSFEDPEKILEQTVLEMNDDLTKMRQATAQ-------------------------------------------
        RGGALGARMNLFDRFARV+KSYANALVSSFEDPEKILEQTVLEMNDDLTKMRQATAQ                                           
Subjt:  RGGALGARMNLFDRFARVIKSYANALVSSFEDPEKILEQTVLEMNDDLTKMRQATAQ-------------------------------------------

Query:  ------DNANALKAQLDQQKSVVENLVSNTRVANMIRIRTESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQAEAL
              DNAN+LKAQLDQQK+VVENLVSNTR+        ESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKV+AMESQAEAL
Subjt:  ------DNANALKAQLDQQKSVVENLVSNTRVANMIRIRTESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQAEAL

Query:  GQLTADDLEGKFALLEGSSVDDELANLKKELSGSSKKGELPPGRTVSGSAFPVRDAEIESELNELRQKAREL
        GQLTADDLEGKFALLEGSSVDDELANLKKELSGSSKKGELPPGRTVSGSAFPVRDAEIESELNELRQKAREL
Subjt:  GQLTADDLEGKFALLEGSSVDDELANLKKELSGSSKKGELPPGRTVSGSAFPVRDAEIESELNELRQKAREL

XP_038882220.1 probable membrane-associated 30 kDa protein, chloroplastic [Benincasa hispida]3.0e-9377.94Show/hide
Query:  RGGALGARMNLFDRFARVIKSYANALVSSFEDPEKILEQTVLEMNDDLTKMRQATAQ-------------------------------------------
        RGGALGARM+L DRFARVIKSYANALVSSFEDPEKILEQTVLEMNDDLTKMRQATAQ                                           
Subjt:  RGGALGARMNLFDRFARVIKSYANALVSSFEDPEKILEQTVLEMNDDLTKMRQATAQ-------------------------------------------

Query:  ------DNANALKAQLDQQKSVVENLVSNTRVANMIRIRTESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQAEAL
              DNANALKAQLDQQKSVVENLVSNTR+        ESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQAEAL
Subjt:  ------DNANALKAQLDQQKSVVENLVSNTRVANMIRIRTESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQAEAL

Query:  GQLTADDLEGKFALLEGSSVDDELANLKKELSGSSKKGELPPGRTVSGSAFPVRDAEIESELNELRQKAREL
        GQLTADDLEGKFALLEGSSVDDELANLKKELSGSSKKGELPPGRTVSGSAFPVRDAEIESELNELRQKAREL
Subjt:  GQLTADDLEGKFALLEGSSVDDELANLKKELSGSSKKGELPPGRTVSGSAFPVRDAEIESELNELRQKAREL

TrEMBL top hitse value%identityAlignment
A0A0A0KXA3 Uncharacterized protein1.2e-9275.72Show/hide
Query:  HRPIRGGALGARMNLFDRFARVIKSYANALVSSFEDPEKILEQTVLEMNDDLTKMRQATAQ---------------------------------------
        H   RGGALGARMNLFDR AR++KSYANALVSSFEDPEKILEQTVLEMNDDLTKMRQATAQ                                       
Subjt:  HRPIRGGALGARMNLFDRFARVIKSYANALVSSFEDPEKILEQTVLEMNDDLTKMRQATAQ---------------------------------------

Query:  ----------DNANALKAQLDQQKSVVENLVSNTRVANMIRIRTESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQ
                  DNANALKAQLDQQK VVENLVSNTR+        ESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQ
Subjt:  ----------DNANALKAQLDQQKSVVENLVSNTRVANMIRIRTESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQ

Query:  AEALGQLTADDLEGKFALLEGSSVDDELANLKKELSGSSKKGELPPGRTVSGSAFPVRDAEIESELNELRQKAREL
        AEALGQLT DDLEGKFALLEGSSVDDELANLKKELSGSSKKGELPPGRTVSGSAFPVRDAEIESELNELRQ+AREL
Subjt:  AEALGQLTADDLEGKFALLEGSSVDDELANLKKELSGSSKKGELPPGRTVSGSAFPVRDAEIESELNELRQKAREL

A0A1S3BX93 membrane-associated 30 kDa protein, chloroplastic4.2e-9376.09Show/hide
Query:  HRPIRGGALGARMNLFDRFARVIKSYANALVSSFEDPEKILEQTVLEMNDDLTKMRQATAQ---------------------------------------
        H   RGGALGARMNLFDR AR++KSYANALVSSFEDPEKILEQTVLEMNDDLTKMRQATAQ                                       
Subjt:  HRPIRGGALGARMNLFDRFARVIKSYANALVSSFEDPEKILEQTVLEMNDDLTKMRQATAQ---------------------------------------

Query:  ----------DNANALKAQLDQQKSVVENLVSNTRVANMIRIRTESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQ
                  DNANALKAQLDQQKSVVENLVSNTR+        ESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQ
Subjt:  ----------DNANALKAQLDQQKSVVENLVSNTRVANMIRIRTESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQ

Query:  AEALGQLTADDLEGKFALLEGSSVDDELANLKKELSGSSKKGELPPGRTVSGSAFPVRDAEIESELNELRQKAREL
        AEALGQLT DDLEGKFALLEGSSVDDELANLKKELSGSSKKGELPPGRTVSGSAFPVRDAEIESELNELRQ+AREL
Subjt:  AEALGQLTADDLEGKFALLEGSSVDDELANLKKELSGSSKKGELPPGRTVSGSAFPVRDAEIESELNELRQKAREL

A0A6J1CXL6 membrane-associated 30 kDa protein, chloroplastic1.9e-9377.21Show/hide
Query:  RGGALGARMNLFDRFARVIKSYANALVSSFEDPEKILEQTVLEMNDDLTKMRQATAQ-------------------------------------------
        RGG LGARMNLFDRFARVIKSYANALVSSFEDPEKILEQTVLEMNDDLTKMRQATAQ                                           
Subjt:  RGGALGARMNLFDRFARVIKSYANALVSSFEDPEKILEQTVLEMNDDLTKMRQATAQ-------------------------------------------

Query:  ------DNANALKAQLDQQKSVVENLVSNTRVANMIRIRTESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQAEAL
              DNANALKAQLDQQK+VVENLVSNTR+        ESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQAEAL
Subjt:  ------DNANALKAQLDQQKSVVENLVSNTRVANMIRIRTESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQAEAL

Query:  GQLTADDLEGKFALLEGSSVDDELANLKKELSGSSKKGELPPGRTVSGSAFPVRDAEIESELNELRQKAREL
        GQLTADDLEGKFALLEGSSVDDELANLKKELSGSSKKGELPPGRTVSGSAFP+RDAEIE+ELNELRQKAREL
Subjt:  GQLTADDLEGKFALLEGSSVDDELANLKKELSGSSKKGELPPGRTVSGSAFPVRDAEIESELNELRQKAREL

A0A6J1GWI0 membrane-associated 30 kDa protein, chloroplastic8.6e-9477.21Show/hide
Query:  RGGALGARMNLFDRFARVIKSYANALVSSFEDPEKILEQTVLEMNDDLTKMRQATAQ-------------------------------------------
        RGGALGARMNLFDRFARV+KSYANALVSSFEDPEKILEQTVLEMNDDLTKMRQATAQ                                           
Subjt:  RGGALGARMNLFDRFARVIKSYANALVSSFEDPEKILEQTVLEMNDDLTKMRQATAQ-------------------------------------------

Query:  ------DNANALKAQLDQQKSVVENLVSNTRVANMIRIRTESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQAEAL
              DNAN+LKAQLDQQK+VVENLVSNTR+        ESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKV+AMESQAEAL
Subjt:  ------DNANALKAQLDQQKSVVENLVSNTRVANMIRIRTESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQAEAL

Query:  GQLTADDLEGKFALLEGSSVDDELANLKKELSGSSKKGELPPGRTVSGSAFPVRDAEIESELNELRQKAREL
        GQLTADDLEGKFALLEGSSVDDELANLKKELSGSSKKGELPPGRTVSGSAFPVRDAEIESELNELRQKAREL
Subjt:  GQLTADDLEGKFALLEGSSVDDELANLKKELSGSSKKGELPPGRTVSGSAFPVRDAEIESELNELRQKAREL

A0A6J1INR4 membrane-associated 30 kDa protein, chloroplastic-like1.5e-9376.84Show/hide
Query:  RGGALGARMNLFDRFARVIKSYANALVSSFEDPEKILEQTVLEMNDDLTKMRQATAQ-------------------------------------------
        RGGALGARMNLFDRFARV+KSYANALVSSFEDPEKILEQTVLEMNDDLTKMRQATAQ                                           
Subjt:  RGGALGARMNLFDRFARVIKSYANALVSSFEDPEKILEQTVLEMNDDLTKMRQATAQ-------------------------------------------

Query:  ------DNANALKAQLDQQKSVVENLVSNTRVANMIRIRTESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQAEAL
              DNAN+LKAQLDQQK+VVENLVSNTR+        ESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKV+AMESQAEAL
Subjt:  ------DNANALKAQLDQQKSVVENLVSNTRVANMIRIRTESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQAEAL

Query:  GQLTADDLEGKFALLEGSSVDDELANLKKELSGSSKKGELPPGRTVSGSAFPVRDAEIESELNELRQKAREL
        GQLTADDLEGKFALLEGSSVDDELANLKKELSGSSKKGELPPGRTVSGSAFPVRDAEIESELNELRQKARE+
Subjt:  GQLTADDLEGKFALLEGSSVDDELANLKKELSGSSKKGELPPGRTVSGSAFPVRDAEIESELNELRQKAREL

SwissProt top hitse value%identityAlignment
O80796 Membrane-associated protein VIPP1, chloroplastic3.4e-7160.22Show/hide
Query:  IRGGALGARMNLFDRFARVIKSYANALVSSFEDPEKILEQTVLEMNDDLTKMRQATAQ------------------------------------------
        +R    GA MNLF+RF+RV+KSYANAL+SSFEDPEKILEQTV+EMN DLTKMRQATAQ                                          
Subjt:  IRGGALGARMNLFDRFARVIKSYANALVSSFEDPEKILEQTVLEMNDDLTKMRQATAQ------------------------------------------

Query:  -------DNANALKAQLDQQKSVVENLVSNTRVANMIRIRTESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQAEA
               DNA ALK QLDQQK VV+NLVSNTR+        ESKIQEA++KKDTL ARA++AKTATKV EM+G VNTS ALSAFEKMEEKV+AMES+A+A
Subjt:  -------DNANALKAQLDQQKSVVENLVSNTRVANMIRIRTESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQAEA

Query:  LGQLTADDLEGKFALLEGSSVDDELANLKKELSGSSKKGELPPGR-TVSGSA-FPVRDAEIESELNELRQKARE
        L Q+  D+LEGKF +LE SSVDD+LA+LKKELSGSSKKGELPPGR TV+ S  +P +D+EIE+ELNELR+KA +
Subjt:  LGQLTADDLEGKFALLEGSSVDDELANLKKELSGSSKKGELPPGR-TVSGSA-FPVRDAEIESELNELRQKARE

Q03943 Membrane-associated 30 kDa protein, chloroplastic1.6e-8165.6Show/hide
Query:  RPIR-GGALGARMNLFDRFARVIKSYANALVSSFEDPEKILEQTVLEMNDDLTKMRQATAQ---------------------------------------
        +P+R GGA+G RMNLFDRFARV+KSYANALVS+FEDPEKILEQ VLEMNDDLTKMRQATAQ                                       
Subjt:  RPIR-GGALGARMNLFDRFARVIKSYANALVSSFEDPEKILEQTVLEMNDDLTKMRQATAQ---------------------------------------

Query:  ----------DNANALKAQLDQQKSVVENLVSNTRVANMIRIRTESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQ
                  DNA++LKAQLDQQKSVV+NLVSNTR+        ESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKV+ MESQ
Subjt:  ----------DNANALKAQLDQQKSVVENLVSNTRVANMIRIRTESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQ

Query:  AEALGQLTADDLEGKFALLEGSSVDDELANLKKELSGSSKKGELPPGR------TVSGSAFPVRDAEIESELNELRQKAREL
        AEALGQLT DDLEGKFA+LE SSVDD+LANLKKEL+GSSKKGELPPGR      T + +  P RDA+IE EL +LR++++EL
Subjt:  AEALGQLTADDLEGKFALLEGSSVDDELANLKKELSGSSKKGELPPGR------TVSGSAFPVRDAEIESELNELRQKAREL

Q55707 Protein sll06177.9e-2835.4Show/hide
Query:  MNLFDRFARVIKSYANALVSSFEDPEKILEQTVLEMNDDLTKMRQATAQ-------------------------------------------------DN
        M LFDR  RV+++  N LVS  EDPEK+LEQ V++M +DL ++RQA A+                                                 D 
Subjt:  MNLFDRFARVIKSYANALVSSFEDPEKILEQTVLEMNDDLTKMRQATAQ-------------------------------------------------DN

Query:  ANALKAQLDQQKSVVENLVSNTRVANMIRIRTESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQAEALGQLTADDL
        A A + QL QQ+++ ENL  N           E+KI EA++KK+ L+ARA++AK   ++ + LG + TSSA SAFE+ME KVL ME+ ++A G+L    +
Subjt:  ANALKAQLDQQKSVVENLVSNTRVANMIRIRTESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQAEALGQLTADDL

Query:  EGKFALLEGSS-VDDELANLKKELSGSSKKG---------ELPPGRTVSGSAFPVRDAEIESELNELRQKAREL
        E +FA LE SS V+DELA LK  ++G +  G           P   +V  +     DA I+ EL++LR++   L
Subjt:  EGKFALLEGSS-VDDELANLKKELSGSSKKG---------ELPPGRTVSGSAFPVRDAEIESELNELRQKAREL

Q8S0J7 Probable membrane-associated 30 kDa protein, chloroplastic3.5e-7665.06Show/hide
Query:  GARMNLFDRFARVIKSYANALVSSFEDPEKILEQTVLEMNDDLTKMRQATAQ------------------------------------------------
        G R NL DRF+RV+KSYANA++SSFEDPEKIL+Q VLEMNDDLTKMRQATAQ                                                
Subjt:  GARMNLFDRFARVIKSYANALVSSFEDPEKILEQTVLEMNDDLTKMRQATAQ------------------------------------------------

Query:  -DNANALKAQLDQQKSVVENLVSNTRVANMIRIRTESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQAEALGQLTA
         DNA++LKAQLDQQK VVENLVSNTRV        ESKI EA+ KKDTLKARAQSAKT+TKVSEMLGNVNTS ALSAFEKMEEKV+AMESQAEALGQL  
Subjt:  -DNANALKAQLDQQKSVVENLVSNTRVANMIRIRTESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQAEALGQLTA

Query:  DDLEGKFALLEGSSVDDELANLKKELSGSSKKGELPPGRTV---SGSAFPVRDAEIESELNELRQKARE
        DDLEGKFALLE SSVDD+LA +KKE+SGSS KGELPPGRT    SG+A P RD EIE+ELNELR+KA E
Subjt:  DDLEGKFALLEGSSVDDELANLKKELSGSSKKGELPPGRTV---SGSAFPVRDAEIESELNELRQKARE

Q9RUB7 Phage shock protein A homolog3.1e-0825.99Show/hide
Query:  MNLFDRFARVIKSYANALVSSFEDPEKILEQTVLEMNDDLTKMRQATAQDNANALKAQ------------------------------------------
        M++FDR +R++++  N ++S  EDP KI++Q + +M       R   A   A A K +                                          
Subjt:  MNLFDRFARVIKSYANALVSSFEDPEKILEQTVLEMNDDLTKMRQATAQDNANALKAQ------------------------------------------

Query:  ---LDQQKSVVENLVSNTRVANMIRIRT-ESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQAEALGQLTAD-DLEG
            D+Q++V ++ V   +     ++R  E+KI E  SKK  L AR ++A+    +  + G      A+ AF +ME+KV  ME + +A+G+L  D D + 
Subjt:  ---LDQQKSVVENLVSNTRVANMIRIRT-ESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQAEALGQLTAD-DLEG

Query:  KFA-LLEGSSVDDELANLKKELSGSSK
        +   L     VDD LA LK ++  S++
Subjt:  KFA-LLEGSSVDDELANLKKELSGSSK

Arabidopsis top hitse value%identityAlignment
AT1G65260.1 plastid transcriptionally active 42.4e-7260.22Show/hide
Query:  IRGGALGARMNLFDRFARVIKSYANALVSSFEDPEKILEQTVLEMNDDLTKMRQATAQ------------------------------------------
        +R    GA MNLF+RF+RV+KSYANAL+SSFEDPEKILEQTV+EMN DLTKMRQATAQ                                          
Subjt:  IRGGALGARMNLFDRFARVIKSYANALVSSFEDPEKILEQTVLEMNDDLTKMRQATAQ------------------------------------------

Query:  -------DNANALKAQLDQQKSVVENLVSNTRVANMIRIRTESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQAEA
               DNA ALK QLDQQK VV+NLVSNTR+        ESKIQEA++KKDTL ARA++AKTATKV EM+G VNTS ALSAFEKMEEKV+AMES+A+A
Subjt:  -------DNANALKAQLDQQKSVVENLVSNTRVANMIRIRTESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQAEA

Query:  LGQLTADDLEGKFALLEGSSVDDELANLKKELSGSSKKGELPPGR-TVSGSA-FPVRDAEIESELNELRQKARE
        L Q+  D+LEGKF +LE SSVDD+LA+LKKELSGSSKKGELPPGR TV+ S  +P +D+EIE+ELNELR+KA +
Subjt:  LGQLTADDLEGKFALLEGSSVDDELANLKKELSGSSKKGELPPGR-TVSGSA-FPVRDAEIESELNELRQKARE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCGAGTTTGGTTGGTCTGAAGTGAATGAGGATTTTGAATTGCATCGTCCCATACGTGGAGGTGCTCTTGGTGCTCGCATGAATCTTTTTGACCGTTTTGCAAGGGT
TATTAAGTCATATGCAAATGCACTTGTGAGTTCCTTTGAGGATCCTGAAAAAATCCTGGAGCAGACAGTGCTTGAAATGAATGATGATTTGACAAAGATGCGTCAAGCCA
CAGCACAGGATAATGCAAATGCTTTGAAAGCTCAACTTGATCAACAAAAGAGTGTTGTGGAAAATCTTGTTTCTAATACACGGGTTGCAAATATGATTAGAATTAGAACA
GAGAGCAAGATACAAGAGGCGAGGTCAAAGAAAGACACACTGAAAGCGCGTGCTCAGTCTGCAAAGACTGCAACCAAAGTGAGTGAAATGTTGGGGAATGTTAACACAAG
TAGTGCTCTCTCTGCTTTCGAGAAGATGGAAGAGAAAGTTTTGGCAATGGAGTCTCAAGCAGAAGCTCTTGGACAGTTAACTGCTGATGATCTTGAAGGAAAGTTTGCTC
TGTTGGAGGGCTCATCCGTTGATGATGAGCTAGCAAACTTGAAGAAAGAGTTATCTGGAAGCTCAAAGAAAGGAGAACTTCCACCAGGAAGAACTGTTTCTGGCAGCGCA
TTTCCGGTTCGTGATGCTGAGATCGAGTCGGAACTCAATGAACTGAGGCAAAAAGCAAGAGAATTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTGCGAGTTTGGTTGGTCTGAAGTGAATGAGGATTTTGAATTGCATCGTCCCATACGTGGAGGTGCTCTTGGTGCTCGCATGAATCTTTTTGACCGTTTTGCAAGGGT
TATTAAGTCATATGCAAATGCACTTGTGAGTTCCTTTGAGGATCCTGAAAAAATCCTGGAGCAGACAGTGCTTGAAATGAATGATGATTTGACAAAGATGCGTCAAGCCA
CAGCACAGGATAATGCAAATGCTTTGAAAGCTCAACTTGATCAACAAAAGAGTGTTGTGGAAAATCTTGTTTCTAATACACGGGTTGCAAATATGATTAGAATTAGAACA
GAGAGCAAGATACAAGAGGCGAGGTCAAAGAAAGACACACTGAAAGCGCGTGCTCAGTCTGCAAAGACTGCAACCAAAGTGAGTGAAATGTTGGGGAATGTTAACACAAG
TAGTGCTCTCTCTGCTTTCGAGAAGATGGAAGAGAAAGTTTTGGCAATGGAGTCTCAAGCAGAAGCTCTTGGACAGTTAACTGCTGATGATCTTGAAGGAAAGTTTGCTC
TGTTGGAGGGCTCATCCGTTGATGATGAGCTAGCAAACTTGAAGAAAGAGTTATCTGGAAGCTCAAAGAAAGGAGAACTTCCACCAGGAAGAACTGTTTCTGGCAGCGCA
TTTCCGGTTCGTGATGCTGAGATCGAGTCGGAACTCAATGAACTGAGGCAAAAAGCAAGAGAATTGTAGGGAATAACATTGTACAGGAAGAAAAGGATCCAAACAGATCA
ACAATTGTATAGCTAAACAACCAACTTGAAAGACAGTAATTTTTGGAGTGAGAGTGCAATAACTTGTATTGATAAATCTGTTTAGGTCATATATATTGATGAATCTGTGG
GATCAAATGTTGTTTGTAAGTTAAAATACACAACTTTCTGAACATAGATCAAATGTTTTTGGTTATCTATTTGCTGTTTTTTCACCAACTTTCTGTAGATACCCAGGTTT
GTTTGCAAAATGCTGGCTGGGATCTTTTGCATCATGTAATTGAAAATTAAGTTTAAGGACTC
Protein sequenceShow/hide protein sequence
MCEFGWSEVNEDFELHRPIRGGALGARMNLFDRFARVIKSYANALVSSFEDPEKILEQTVLEMNDDLTKMRQATAQDNANALKAQLDQQKSVVENLVSNTRVANMIRIRT
ESKIQEARSKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLAMESQAEALGQLTADDLEGKFALLEGSSVDDELANLKKELSGSSKKGELPPGRTVSGSA
FPVRDAEIESELNELRQKAREL