; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi07G003680 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G003680
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionrho GTPase-activating protein gacH
Genome locationchr07:3947708..3948850
RNA-Seq ExpressionLsi07G003680
SyntenyLsi07G003680
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR036020 - WW domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7029133.1 hypothetical protein SDJN02_10318 [Cucurbita argyrosperma subsp. argyrosperma]5.8e-5264.43Show/hide
Query:  MGTITEALECSLKKCSLSSHLQTTTQSISSSDSSNNDNDDDDDNNKIPSSIHQSTSLDLNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSTRE
        M TIT ALE SL+ CSLS H +           + N +  D         +   T+LDLNSH+SLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRS  E
Subjt:  MGTITEALECSLKKCSLSSHLQTTTQSISSSDSSNNDNDDDDDNNKIPSSIHQSTSLDLNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSTRE

Query:  DDQYSEDYCYYYSDDDDESSYDSEESSTESSNNNNNKNKKFVV------EEEEEEKDVLVVGGCKRCLMYFMVPKHLEDCPKC-NGQLLHFDRS
         D YSED  YYYSDDDD+   DS+ESSTESSNNNN  NK +        EEEEEE+DVLVV GCK CLMYFMVPK +EDCPKC NGQLLHFDRS
Subjt:  DDQYSEDYCYYYSDDDDESSYDSEESSTESSNNNNNKNKKFVV------EEEEEEKDVLVVGGCKRCLMYFMVPKHLEDCPKC-NGQLLHFDRS

XP_004152315.3 serine/threonine-protein kinase stk11 homolog [Cucumis sativus]2.4e-6170.42Show/hide
Query:  MGTITEALECSLKKCSLS------SHLQTTTQS-----ISSSDSSNNDNDDDDDNNKIPSSIH-----QSTSLDLNSHLSLPYHWEQCLDLKTGEIYYIN
        MGTITEALECSL+KCSL+       H   T Q+     ISSS SS++ +          SSIH     QSTSLDLNSHLSLPYHWEQCLDLKTGEIYYIN
Subjt:  MGTITEALECSLKKCSLS------SHLQTTTQS-----ISSSDSSNNDNDDDDDNNKIPSSIH-----QSTSLDLNSHLSLPYHWEQCLDLKTGEIYYIN

Query:  WRNGMKAKEDPRST-----REDDQYSEDYCYYYSDD----DDESSYDSEESSTESSNNNNNKNKKFVVEEEEEEKDVLVVGGCKRCLMYFMVPKHLEDCP
        WRNGMKAKEDPRST      +DD+YSEDYCYYYSDD    DD SSYDSEESSTES+  N  K KK  V EEEEEKDVLVVGGCKRCLMYFMVPKHL+DCP
Subjt:  WRNGMKAKEDPRST-----REDDQYSEDYCYYYSDD----DDESSYDSEESSTESSNNNNNKNKKFVVEEEEEEKDVLVVGGCKRCLMYFMVPKHLEDCP

Query:  KC-NGQLLHFDRS
        KC NGQLLHFDRS
Subjt:  KC-NGQLLHFDRS

XP_008454114.1 PREDICTED: knob-associated histidine-rich protein-like [Cucumis melo]3.3e-6369.81Show/hide
Query:  MGTITEALECSLKKCSLS--------SHLQTTTQSISSSDSSNNDNDDDDDNNKIPSSIHQSTSLDLNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAK
        MGTITEALECSL+KCSL+         H QT  Q + SS SS++ +     ++ I    HQSTSLDLNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAK
Subjt:  MGTITEALECSLKKCSLS--------SHLQTTTQSISSSDSSNNDNDDDDDNNKIPSSIHQSTSLDLNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAK

Query:  EDPRST-----REDDQYSEDYCYYYSD--------DDDESSYDSEESSTESSN---NNNNKNKKFVVEEEEEEKDVLVVGGCKRCLMYFMVPKHLEDCPK
        EDPRST      +DD+YSEDYCYYYSD        DDD SSYDSEESSTES+N       K K FVVEE EEEKDVLVVGGCKRCLMYFMVPKHL+DCPK
Subjt:  EDPRST-----REDDQYSEDYCYYYSD--------DDDESSYDSEESSTESSN---NNNNKNKKFVVEEEEEEKDVLVVGGCKRCLMYFMVPKHLEDCPK

Query:  C-NGQLLHFDRS
        C NGQLLHFDRS
Subjt:  C-NGQLLHFDRS

XP_022955477.1 uncharacterized protein LOC111457490 isoform X2 [Cucurbita moschata]5.8e-5267.2Show/hide
Query:  MGTITEALECSLKKCSLSSHLQTTTQSISSSDSSNNDNDDDDDNNKIPSSIHQSTSLDLNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSTRE
        M T+T ALE SL+ CSL SH Q      S S                 SS H    L LNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPR T E
Subjt:  MGTITEALECSLKKCSLSSHLQTTTQSISSSDSSNNDNDDDDDNNKIPSSIHQSTSLDLNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSTRE

Query:  DDQYSED-YCYYYSDDDDESSYDSEESSTESSNNNNNKNKKFVVEEEEEEKDVLVVGGCKRCLMYFMVPKHLEDCPKC-NGQLLHFDRS
        DDQYS+D YCY   DDDD+SSYDSEESST SS NN NKNK     EE++E+DVLVV GCKRCLMYFMVPKHLE+CPKC +G+LLHFDRS
Subjt:  DDQYSED-YCYYYSDDDDESSYDSEESSTESSNNNNNKNKKFVVEEEEEEKDVLVVGGCKRCLMYFMVPKHLEDCPKC-NGQLLHFDRS

XP_038880672.1 uncharacterized protein LOC120072288 [Benincasa hispida]7.8e-7383.07Show/hide
Query:  MGTITEALECSLKKCSLSSH-LQTTTQSISSSDSSNNDNDDDDDNNKIPSSIHQ-STSLDLNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRST
        MGTITEALECSLKKCSLS H      Q +SSSDSS+        NNK  SSIHQ +T+LDLNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRST
Subjt:  MGTITEALECSLKKCSLSSH-LQTTTQSISSSDSSNNDNDDDDDNNKIPSSIHQ-STSLDLNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRST

Query:  REDDQYSEDYCYYYSDDDDESSYDSEESSTESSNNNNNKNKKFVVEEEEEEKDVLVVGGCKRCLMYFMVPKHLEDCPKCNGQLLHFDRS
        +EDD+YSEDYCYYYSDDDD SSYDSEESSTESSNNNN  NKKF V EEEEEKDVLVVGGCKRC MYFMVPK+LEDCPKCNGQLLHFDRS
Subjt:  REDDQYSEDYCYYYSDDDDESSYDSEESSTESSNNNNNKNKKFVVEEEEEEKDVLVVGGCKRCLMYFMVPKHLEDCPKCNGQLLHFDRS

TrEMBL top hitse value%identityAlignment
A0A0A0KTY3 Uncharacterized protein1.5e-6172.28Show/hide
Query:  MGTITEALECSLKKCSLSSHLQTTTQSISSSDSSNNDNDDDDDNNKIPSSIH-----QSTSLDLNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDP
        MGTITEALECSL+K    SH Q    S SSS S ++ +          SSIH     QSTSLDLNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDP
Subjt:  MGTITEALECSLKKCSLSSHLQTTTQSISSSDSSNNDNDDDDDNNKIPSSIH-----QSTSLDLNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDP

Query:  RST-----REDDQYSEDYCYYYSDD----DDESSYDSEESSTESSNNNNNKNKKFVVEEEEEEKDVLVVGGCKRCLMYFMVPKHLEDCPKC-NGQLLHFD
        RST      +DD+YSEDYCYYYSDD    DD SSYDSEESSTES+  N  K KK  V EEEEEKDVLVVGGCKRCLMYFMVPKHL+DCPKC NGQLLHFD
Subjt:  RST-----REDDQYSEDYCYYYSDD----DDESSYDSEESSTESSNNNNNKNKKFVVEEEEEEKDVLVVGGCKRCLMYFMVPKHLEDCPKC-NGQLLHFD

Query:  RS
        RS
Subjt:  RS

A0A1S3BXV1 knob-associated histidine-rich protein-like1.6e-6369.81Show/hide
Query:  MGTITEALECSLKKCSLS--------SHLQTTTQSISSSDSSNNDNDDDDDNNKIPSSIHQSTSLDLNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAK
        MGTITEALECSL+KCSL+         H QT  Q + SS SS++ +     ++ I    HQSTSLDLNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAK
Subjt:  MGTITEALECSLKKCSLS--------SHLQTTTQSISSSDSSNNDNDDDDDNNKIPSSIHQSTSLDLNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAK

Query:  EDPRST-----REDDQYSEDYCYYYSD--------DDDESSYDSEESSTESSN---NNNNKNKKFVVEEEEEEKDVLVVGGCKRCLMYFMVPKHLEDCPK
        EDPRST      +DD+YSEDYCYYYSD        DDD SSYDSEESSTES+N       K K FVVEE EEEKDVLVVGGCKRCLMYFMVPKHL+DCPK
Subjt:  EDPRST-----REDDQYSEDYCYYYSD--------DDDESSYDSEESSTESSN---NNNNKNKKFVVEEEEEEKDVLVVGGCKRCLMYFMVPKHLEDCPK

Query:  C-NGQLLHFDRS
        C NGQLLHFDRS
Subjt:  C-NGQLLHFDRS

A0A6J1GTR7 uncharacterized protein LOC111457490 isoform X22.8e-5267.2Show/hide
Query:  MGTITEALECSLKKCSLSSHLQTTTQSISSSDSSNNDNDDDDDNNKIPSSIHQSTSLDLNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSTRE
        M T+T ALE SL+ CSL SH Q      S S                 SS H    L LNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPR T E
Subjt:  MGTITEALECSLKKCSLSSHLQTTTQSISSSDSSNNDNDDDDDNNKIPSSIHQSTSLDLNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSTRE

Query:  DDQYSED-YCYYYSDDDDESSYDSEESSTESSNNNNNKNKKFVVEEEEEEKDVLVVGGCKRCLMYFMVPKHLEDCPKC-NGQLLHFDRS
        DDQYS+D YCY   DDDD+SSYDSEESST SS NN NKNK     EE++E+DVLVV GCKRCLMYFMVPKHLE+CPKC +G+LLHFDRS
Subjt:  DDQYSED-YCYYYSDDDDESSYDSEESSTESSNNNNNKNKKFVVEEEEEEKDVLVVGGCKRCLMYFMVPKHLEDCPKC-NGQLLHFDRS

A0A6J1GTV5 protein Tube-like isoform X15.9e-5063.68Show/hide
Query:  MGTITEALECSLKKCSLSSHLQTTTQSISSSDSSNNDNDDDDDNNKIPSSIHQSTSLDLNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSTRE
        M T+T ALE SL+ CSL SH Q      S S                 SS H    L LNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPR T E
Subjt:  MGTITEALECSLKKCSLSSHLQTTTQSISSSDSSNNDNDDDDDNNKIPSSIHQSTSLDLNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSTRE

Query:  DDQYSEDYCYYYS-------------DDDDESSYDSEESSTESSNNNNNKNKKFVVEEEEEEKDVLVVGGCKRCLMYFMVPKHLEDCPKC-NGQLLHFDR
        DDQYS+DY Y YS             DDDD+SSYDSEESST SS NN NKNK     EE++E+DVLVV GCKRCLMYFMVPKHLE+CPKC +G+LLHFDR
Subjt:  DDQYSEDYCYYYS-------------DDDDESSYDSEESSTESSNNNNNKNKKFVVEEEEEEKDVLVVGGCKRCLMYFMVPKHLEDCPKC-NGQLLHFDR

Query:  S
        S
Subjt:  S

A0A6J1IQL3 methionine aminopeptidase 2-like3.1e-5166.15Show/hide
Query:  MGTITEALECSLKKCSLSSHLQTTTQSISSSDSSNNDNDDDDDNNKIPSSIHQSTSLDLNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSTRE
        M T+T ALE SL+ CSL SH Q T    S S                 SS H    L LNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPR T E
Subjt:  MGTITEALECSLKKCSLSSHLQTTTQSISSSDSSNNDNDDDDDNNKIPSSIHQSTSLDLNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSTRE

Query:  DDQYSEDYCYYYS-------DDDDESSYDSEESSTESSNNNNNKNKKFVVEEEEEEKDVLVVGGCKRCLMYFMVPKHLEDCPKC-NGQLLHFDRS
        DDQYS+DY Y YS       DDDD+SSYDSEESSTESS NN NKNK     EE++E+DVLVV GCKRCLMYFMVPKHLE+CPKC +G+LL+FDRS
Subjt:  DDQYSEDYCYYYS-------DDDDESSYDSEESSTESSNNNNNKNKKFVVEEEEEEKDVLVVGGCKRCLMYFMVPKHLEDCPKC-NGQLLHFDRS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G28070.1 unknown protein2.7e-3145.55Show/hide
Query:  MGTITEALECSLKKCSLSSHLQTTTQSISSSDSSNNDNDDDDDNNKIPSSIHQSTSLDLNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSTRE
        M  ITE LE S++ CSL     +       SD              IP S      L+L+SH S+P H EQCLDLKTGEIYY +W +GM+ KEDPR +  
Subjt:  MGTITEALECSLKKCSLSSHLQTTTQSISSSDSSNNDNDDDDDNNKIPSSIHQSTSLDLNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSTRE

Query:  DDQYS-----EDYCYYYSDDDDESSYDSEESSTESSNNNNNKNKKFVVEEEEEEKDVLVVGGCKRCLMYFMVPKHLEDCPKCNGQLLHFDR
           Y+     E     +S ++  S Y+SEESS+ESS ++   +K      EE+++DVLVV GCK CLMYFMVPK  +DCPKC  QLLHFD+
Subjt:  DDQYS-----EDYCYYYSDDDDESSYDSEESSTESSNNNNNKNKKFVVEEEEEEKDVLVVGGCKRCLMYFMVPKHLEDCPKCNGQLLHFDR

AT2G33510.1 CONTAINS InterPro DOMAIN/s: WW/Rsp5/WWP (InterPro:IPR001202)1.4e-4053.44Show/hide
Query:  MGTITEALECSLKKCSLSSHLQTTTQSISSSDSSNNDNDDDDDNNKIPSSIHQSTSLDLNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSTRE
        M TITE+LE S+  CSL+   +          SSN       D            +L+LNSHLSLP HWEQCLDLKTGEIYYINW+NGM+ KEDPR    
Subjt:  MGTITEALECSLKKCSLSSHLQTTTQSISSSDSSNNDNDDDDDNNKIPSSIHQSTSLDLNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSTRE

Query:  DDQYSEDYCYYYSDDDDESSYDSEESSTE---SSNNNNNKNKKFVVEEEEEEKDVLVVGGCKRCLMYFMVPKHLEDCPKCNGQLLHFDR
         D  S D       ++D S YDSEESS+E   SS  N+ + ++   EEEEEE+DVLVV GCK C MYFMVPK +EDCPKC  QLLHFDR
Subjt:  DDQYSEDYCYYYSDDDDESSYDSEESSTE---SSNNNNNKNKKFVVEEEEEEKDVLVVGGCKRCLMYFMVPKHLEDCPKCNGQLLHFDR

AT2G33510.2 unknown protein1.5e-3749.51Show/hide
Query:  MGTITEALECSLKKCSLSSHLQTTTQSISSSDSSNNDNDDDDDNNKIPSSIHQSTSLDLNSHLSLPYHWEQCLDLK---------------TGEIYYINW
        M TITE+LE S+  CSL+   +          SSN       D            +L+LNSHLSLP HWEQCLDLK               TGEIYYINW
Subjt:  MGTITEALECSLKKCSLSSHLQTTTQSISSSDSSNNDNDDDDDNNKIPSSIHQSTSLDLNSHLSLPYHWEQCLDLK---------------TGEIYYINW

Query:  RNGMKAKEDPRSTREDDQYSEDYCYYYSDDDDESSYDSEESSTE---SSNNNNNKNKKFVVEEEEEEKDVLVVGGCKRCLMYFMVPKHLEDCPKCNGQLL
        +NGM+ KEDPR     D  S D       ++D S YDSEESS+E   SS  N+ + ++   EEEEEE+DVLVV GCK C MYFMVPK +EDCPKC  QLL
Subjt:  RNGMKAKEDPRSTREDDQYSEDYCYYYSDDDDESSYDSEESSTE---SSNNNNNKNKKFVVEEEEEEKDVLVVGGCKRCLMYFMVPKHLEDCPKCNGQLL

Query:  HFDR
        HFDR
Subjt:  HFDR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAACAATCACAGAGGCTTTAGAATGCTCTCTAAAAAAATGTTCTTTAAGCAGCCATCTTCAAACAACAACTCAATCTATTTCTTCTTCAGATTCTTCCAACAACGA
CAACGACGACGACGACGACAACAACAAAATCCCTTCTTCTATTCATCAATCAACCTCTTTGGATCTCAACTCCCATCTCTCTTTGCCTTACCATTGGGAGCAATGTCTTG
ATTTAAAGACAGGGGAGATATACTATATAAATTGGAGGAATGGAATGAAGGCAAAGGAAGATCCAAGGTCTACAAGAGAAGATGATCAATATAGTGAAGATTATTGTTAT
TACTATTCTGACGACGACGACGAGAGCTCTTACGACAGCGAAGAGTCGTCGACGGAATCGTCAAATAACAACAACAACAAAAACAAGAAGTTCGTGGTAGAAGAAGAAGA
AGAAGAAAAAGATGTTTTGGTGGTTGGAGGTTGCAAGAGATGCCTAATGTATTTTATGGTTCCAAAACATCTTGAAGATTGCCCTAAATGCAATGGTCAGCTTCTTCATT
TTGATCGCTCATGA
mRNA sequenceShow/hide mRNA sequence
ACGAGTTGTTCGTGAGATTAGTTGAGGTGTGTGTAAGTTGGTCCAGACACGGATCACAGATATAAAAAAAAAACTTTAGTTTTATAATTATTTGTCAATATTTCTCTAGC
TTAATCTCTTTGTATGTGTGTGTGGGTAGAAGAGTGTTTATATTTGGTATTTGGCTGTTTTTATTGATATATGATGTTAGGTAGAGTTTTGAAGGGGAGAAATTAGAAGA
GATCATCAGTTGCAAAAAGATGGGAACAATCACAGAGGCTTTAGAATGCTCTCTAAAAAAATGTTCTTTAAGCAGCCATCTTCAAACAACAACTCAATCTATTTCTTCTT
CAGATTCTTCCAACAACGACAACGACGACGACGACGACAACAACAAAATCCCTTCTTCTATTCATCAATCAACCTCTTTGGATCTCAACTCCCATCTCTCTTTGCCTTAC
CATTGGGAGCAATGTCTTGATTTAAAGACAGGGGAGATATACTATATAAATTGGAGGAATGGAATGAAGGCAAAGGAAGATCCAAGGTCTACAAGAGAAGATGATCAATA
TAGTGAAGATTATTGTTATTACTATTCTGACGACGACGACGAGAGCTCTTACGACAGCGAAGAGTCGTCGACGGAATCGTCAAATAACAACAACAACAAAAACAAGAAGT
TCGTGGTAGAAGAAGAAGAAGAAGAAAAAGATGTTTTGGTGGTTGGAGGTTGCAAGAGATGCCTAATGTATTTTATGGTTCCAAAACATCTTGAAGATTGCCCTAAATGC
AATGGTCAGCTTCTTCATTTTGATCGCTCATGAATATCAGACAAACCCCTTCCTCTATTTTTCAATTCCATTATTCCATTTCTTTTCTTTTTTTCTTTTTTCATGGGAAA
AAGAGAGGAAGAAAGAGGAAGAAATTAAAAGAGAGAGAGAGAG
Protein sequenceShow/hide protein sequence
MGTITEALECSLKKCSLSSHLQTTTQSISSSDSSNNDNDDDDDNNKIPSSIHQSTSLDLNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSTREDDQYSEDYCY
YYSDDDDESSYDSEESSTESSNNNNNKNKKFVVEEEEEEKDVLVVGGCKRCLMYFMVPKHLEDCPKCNGQLLHFDRS