; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi07G003690 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G003690
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionTify domain-containing protein
Genome locationchr07:3954215..3958537
RNA-Seq ExpressionLsi07G003690
SyntenyLsi07G003690
Gene Ontology termsGO:0009611 - response to wounding (biological process)
GO:0031347 - regulation of defense response (biological process)
GO:2000022 - regulation of jasmonic acid mediated signaling pathway (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR010399 - Tify domain
IPR040390 - TIFY/JAZ family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004152149.1 protein TIFY 9 isoform X1 [Cucumis sativus]1.7e-5574.03Show/hide
Query:  MSIVELDFFAMENQSAA--SKSSLFRRQRSFKDIQSAISKINPAILKSLIVSGSADHCSDFTIPIAISRKFPLPTPYRSANEDHNLSTVLPVYSASTSRH
        MS VELDFFAMENQS++  + S+LFRRQRSFKDIQSAISKINPAILKSLIVSGSADH SDFT+P AIS KF      RS N D NLST LPVYS S SR 
Subjt:  MSIVELDFFAMENQSAA--SKSSLFRRQRSFKDIQSAISKINPAILKSLIVSGSADHCSDFTIPIAISRKFPLPTPYRSANEDHNLSTVLPVYSASTSRH

Query:  SSNPLLSPEIAS-DKYPLTIFYNETVAVFHVSRDEFKSILRFAETGSSASNGKGEAEKGKSMAEIPSNQHQRLVDVDPQDE
             LS EI S DKYPLTIFYNETVAVFHVSRDE KSIL FAE   S SNGK  AE+ KS+AEIPSNQ+Q+L+DVDPQDE
Subjt:  SSNPLLSPEIAS-DKYPLTIFYNETVAVFHVSRDEFKSILRFAETGSSASNGKGEAEKGKSMAEIPSNQHQRLVDVDPQDE

XP_008454115.1 PREDICTED: protein TIFY 9-like [Cucumis melo]1.5e-5472.83Show/hide
Query:  MSIVELDFFAMENQSA-----ASKSSLFRRQRSFKDIQSAISKINPAILKSLIVSGSADHCSDFTIPIAISRKFPLPTPYRSANEDHNLSTVLPVYSAST
        MSIVELDFFAMENQS+     A+ S+LFRRQRS KDIQSAISKINPAILKSLIVSGS DH SDFT+P AIS KF      RS N D NL T LPVYSAS 
Subjt:  MSIVELDFFAMENQSA-----ASKSSLFRRQRSFKDIQSAISKINPAILKSLIVSGSADHCSDFTIPIAISRKFPLPTPYRSANEDHNLSTVLPVYSAST

Query:  SRHSSNPLLSPEIAS-DKYPLTIFYNETVAVFHVSRDEFKSILRFAETGSSASNGKGEAEKGKSMAEIPSNQHQRLVDVDPQDE
        SR      LS EI S DKYPLTIFYNETVAVFHVSRDE KSIL FAE   S SN K  AE+GKS+AEIPSNQ+Q+L+DVDPQDE
Subjt:  SRHSSNPLLSPEIAS-DKYPLTIFYNETVAVFHVSRDEFKSILRFAETGSSASNGKGEAEKGKSMAEIPSNQHQRLVDVDPQDE

XP_023528529.1 protein TIFY 9-like isoform X2 [Cucurbita pepo subsp. pepo]7.0e-4962.3Show/hide
Query:  MSIVELDFFAMENQSAASKS--SLFRRQRSFKDIQSAISKINPAILKSLIVSGSADHCSDFTIPIAISRKFPLPTPYRSANEDHNLSTVLPVYSASTSRH
        MSIVELDFFAM+N+S  S S  +LFRR RSFKDIQ AISKINP ILKSLI SGS +H SDF  P  I +KFP  +  R+ N D NLST  PVYSA+TSR 
Subjt:  MSIVELDFFAMENQSAASKS--SLFRRQRSFKDIQSAISKINPAILKSLIVSGSADHCSDFTIPIAISRKFPLPTPYRSANEDHNLSTVLPVYSASTSRH

Query:  SSNPLLSPEIASDKYPLTIFYNETVAVFHVSRDEFKSILRFAE--TGSSASNGKGEAEKGKSMAEIPSNQHQRLVDVDPQDEGTSSIGKEK
             +SPEIAS+KYPLTIFYNETV+VFHVSRDE K+I+RFAE  +G+ +  GKGEAEKG+ MAEI SNQ+Q+ V +DP+D+    + +++
Subjt:  SSNPLLSPEIASDKYPLTIFYNETVAVFHVSRDEFKSILRFAE--TGSSASNGKGEAEKGKSMAEIPSNQHQRLVDVDPQDEGTSSIGKEK

XP_031739596.1 protein TIFY 9 isoform X2 [Cucumis sativus]1.7e-5574.03Show/hide
Query:  MSIVELDFFAMENQSAA--SKSSLFRRQRSFKDIQSAISKINPAILKSLIVSGSADHCSDFTIPIAISRKFPLPTPYRSANEDHNLSTVLPVYSASTSRH
        MS VELDFFAMENQS++  + S+LFRRQRSFKDIQSAISKINPAILKSLIVSGSADH SDFT+P AIS KF      RS N D NLST LPVYS S SR 
Subjt:  MSIVELDFFAMENQSAA--SKSSLFRRQRSFKDIQSAISKINPAILKSLIVSGSADHCSDFTIPIAISRKFPLPTPYRSANEDHNLSTVLPVYSASTSRH

Query:  SSNPLLSPEIAS-DKYPLTIFYNETVAVFHVSRDEFKSILRFAETGSSASNGKGEAEKGKSMAEIPSNQHQRLVDVDPQDE
             LS EI S DKYPLTIFYNETVAVFHVSRDE KSIL FAE   S SNGK  AE+ KS+AEIPSNQ+Q+L+DVDPQDE
Subjt:  SSNPLLSPEIAS-DKYPLTIFYNETVAVFHVSRDEFKSILRFAETGSSASNGKGEAEKGKSMAEIPSNQHQRLVDVDPQDE

XP_038905062.1 protein TIFY 9-like [Benincasa hispida]2.8e-6683.43Show/hide
Query:  MSIVELDFFAMENQS--AASKSSLFRRQRSFKDIQSAISKINPAILKSLIVSGSADH-CSDFTIPIAISRKFPLPTPYRSANEDHNLSTVLPVYSASTSR
        MSIVELDFFAMENQS  AAS S+LFRRQRS KDIQSAISKINPAILKSLIVSGSADH  SDFTIPIAI  KF  P PYRS N D NLST LPVYSASTSR
Subjt:  MSIVELDFFAMENQS--AASKSSLFRRQRSFKDIQSAISKINPAILKSLIVSGSADH-CSDFTIPIAISRKFPLPTPYRSANEDHNLSTVLPVYSASTSR

Query:  HSSNPLLSPEIASDKYPLTIFYNETVAVFHVSRDEFKSILRFAETGSSASNGKGEAEKGKSMAEIPSNQHQRLVDVDPQDE
              LSPEIAS+KYPLTIFYNETVAVFHVSR+E KSIL FAE GSSASNGKGEAEKGKSMAEI SNQHQ+LV+VDPQDE
Subjt:  HSSNPLLSPEIASDKYPLTIFYNETVAVFHVSRDEFKSILRFAETGSSASNGKGEAEKGKSMAEIPSNQHQRLVDVDPQDE

TrEMBL top hitse value%identityAlignment
A0A0A0KX64 Tify domain-containing protein8.3e-5674.03Show/hide
Query:  MSIVELDFFAMENQSAA--SKSSLFRRQRSFKDIQSAISKINPAILKSLIVSGSADHCSDFTIPIAISRKFPLPTPYRSANEDHNLSTVLPVYSASTSRH
        MS VELDFFAMENQS++  + S+LFRRQRSFKDIQSAISKINPAILKSLIVSGSADH SDFT+P AIS KF      RS N D NLST LPVYS S SR 
Subjt:  MSIVELDFFAMENQSAA--SKSSLFRRQRSFKDIQSAISKINPAILKSLIVSGSADHCSDFTIPIAISRKFPLPTPYRSANEDHNLSTVLPVYSASTSRH

Query:  SSNPLLSPEIAS-DKYPLTIFYNETVAVFHVSRDEFKSILRFAETGSSASNGKGEAEKGKSMAEIPSNQHQRLVDVDPQDE
             LS EI S DKYPLTIFYNETVAVFHVSRDE KSIL FAE   S SNGK  AE+ KS+AEIPSNQ+Q+L+DVDPQDE
Subjt:  SSNPLLSPEIAS-DKYPLTIFYNETVAVFHVSRDEFKSILRFAETGSSASNGKGEAEKGKSMAEIPSNQHQRLVDVDPQDE

A0A1S3BYM2 protein TIFY 9-like7.0e-5572.83Show/hide
Query:  MSIVELDFFAMENQSA-----ASKSSLFRRQRSFKDIQSAISKINPAILKSLIVSGSADHCSDFTIPIAISRKFPLPTPYRSANEDHNLSTVLPVYSAST
        MSIVELDFFAMENQS+     A+ S+LFRRQRS KDIQSAISKINPAILKSLIVSGS DH SDFT+P AIS KF      RS N D NL T LPVYSAS 
Subjt:  MSIVELDFFAMENQSA-----ASKSSLFRRQRSFKDIQSAISKINPAILKSLIVSGSADHCSDFTIPIAISRKFPLPTPYRSANEDHNLSTVLPVYSAST

Query:  SRHSSNPLLSPEIAS-DKYPLTIFYNETVAVFHVSRDEFKSILRFAETGSSASNGKGEAEKGKSMAEIPSNQHQRLVDVDPQDE
        SR      LS EI S DKYPLTIFYNETVAVFHVSRDE KSIL FAE   S SN K  AE+GKS+AEIPSNQ+Q+L+DVDPQDE
Subjt:  SRHSSNPLLSPEIAS-DKYPLTIFYNETVAVFHVSRDEFKSILRFAETGSSASNGKGEAEKGKSMAEIPSNQHQRLVDVDPQDE

A0A6J1GWT1 protein TIFY 9-like isoform X22.4e-4760.73Show/hide
Query:  MSIVELDFFAMENQSAASKS--SLFRRQRSFKDIQSAISKINPAILKSLIVSGSADHCSDFTIPIAISRKFPLPTPYRSANEDHNLSTVLPVYSASTSRH
        MS VELDFFAM+++S  S S  +LFRR RSFKDIQ AISKINP ILKSLI SGS +H SDF  P  I +KFP  + +R+ N D NLST  PVYSA+TSR 
Subjt:  MSIVELDFFAMENQSAASKS--SLFRRQRSFKDIQSAISKINPAILKSLIVSGSADHCSDFTIPIAISRKFPLPTPYRSANEDHNLSTVLPVYSASTSRH

Query:  SSNPLLSPEIASDKYPLTIFYNETVAVFHVSRDEFKSILRFAETGSSASNG--KGEAEKGKSMAEIPSNQHQRLVDVDPQDEGTSSIGKEK
             +SP IAS+KYPLTIFYNETV+VFHVSRDE K+I+RFAE  S    G  KGEAEKG+ MAEI SNQ+Q+ V +DP+D+    + +++
Subjt:  SSNPLLSPEIASDKYPLTIFYNETVAVFHVSRDEFKSILRFAETGSSASNG--KGEAEKGKSMAEIPSNQHQRLVDVDPQDEGTSSIGKEK

A0A6J1ISR6 protein TIFY 9-like isoform X25.8e-4962.83Show/hide
Query:  MSIVELDFFAMENQSAASKS--SLFRRQRSFKDIQSAISKINPAILKSLIVSGSADHCSDFTIPIAISRKFPLPTPYRSANEDHNLSTVLPVYSASTSRH
        MSIVELDFFAM+N+S  S S  +LFRR RSFKDIQ AISKINP ILKSLI SGS +H SDF  P  I +KFP  + +R+   D NLST  PVYSA+TSR 
Subjt:  MSIVELDFFAMENQSAASKS--SLFRRQRSFKDIQSAISKINPAILKSLIVSGSADHCSDFTIPIAISRKFPLPTPYRSANEDHNLSTVLPVYSASTSRH

Query:  SSNPLLSPEIASDKYPLTIFYNETVAVFHVSRDEFKSILRFAETGSSASN--GKGEAEKGKSMAEIPSNQHQRLVDVDPQDEGTSSIGKEK
             +SPEIAS+KYPLTIFYNETV+VFHVSRDE K+I+RFAE GS      GKGEAE GK MAEI SNQHQ+LV  D +D+    + +++
Subjt:  SSNPLLSPEIASDKYPLTIFYNETVAVFHVSRDEFKSILRFAETGSSASN--GKGEAEKGKSMAEIPSNQHQRLVDVDPQDEGTSSIGKEK

A0A6J1IVD8 protein TIFY 9-like isoform X15.8e-4962.83Show/hide
Query:  MSIVELDFFAMENQSAASKS--SLFRRQRSFKDIQSAISKINPAILKSLIVSGSADHCSDFTIPIAISRKFPLPTPYRSANEDHNLSTVLPVYSASTSRH
        MSIVELDFFAM+N+S  S S  +LFRR RSFKDIQ AISKINP ILKSLI SGS +H SDF  P  I +KFP  + +R+   D NLST  PVYSA+TSR 
Subjt:  MSIVELDFFAMENQSAASKS--SLFRRQRSFKDIQSAISKINPAILKSLIVSGSADHCSDFTIPIAISRKFPLPTPYRSANEDHNLSTVLPVYSASTSRH

Query:  SSNPLLSPEIASDKYPLTIFYNETVAVFHVSRDEFKSILRFAETGSSASN--GKGEAEKGKSMAEIPSNQHQRLVDVDPQDEGTSSIGKEK
             +SPEIAS+KYPLTIFYNETV+VFHVSRDE K+I+RFAE GS      GKGEAE GK MAEI SNQHQ+LV  D +D+    + +++
Subjt:  SSNPLLSPEIASDKYPLTIFYNETVAVFHVSRDEFKSILRFAETGSSASN--GKGEAEKGKSMAEIPSNQHQRLVDVDPQDEGTSSIGKEK

SwissProt top hitse value%identityAlignment
Q93ZM9 Protein TIFY 91.0e-1038.78Show/hide
Query:  VELDFFAME----NQSAASKSSLF-RRQRSFKDIQSAISKINPAILKSLIVSGSADHCSDFTIPIAISRKFPLPTPYRSANEDHNLSTVLPVYSASTSRH
        +ELDF  +E    N +   K   F  R+RSF+DIQ AISKI+P I+KSL+ S   +  S      A SR  P  TP     ED     + PV       H
Subjt:  VELDFFAME----NQSAASKSSLF-RRQRSFKDIQSAISKINPAILKSLIVSGSADHCSDFTIPIAISRKFPLPTPYRSANEDHNLSTVLPVYSASTSRH

Query:  SSNPLLSPEIASDKYPLTIFYNETVAVFHVSRDEFKSILRFAETGSS
        +S    S E+ S   P+TIFYN +V+VF VSR++   I++ A   +S
Subjt:  SSNPLLSPEIASDKYPLTIFYNETVAVFHVSRDEFKSILRFAETGSS

Arabidopsis top hitse value%identityAlignment
AT5G13220.1 jasmonate-zim-domain protein 107.3e-1238.78Show/hide
Query:  VELDFFAME----NQSAASKSSLF-RRQRSFKDIQSAISKINPAILKSLIVSGSADHCSDFTIPIAISRKFPLPTPYRSANEDHNLSTVLPVYSASTSRH
        +ELDF  +E    N +   K   F  R+RSF+DIQ AISKI+P I+KSL+ S   +  S      A SR  P  TP     ED     + PV       H
Subjt:  VELDFFAME----NQSAASKSSLF-RRQRSFKDIQSAISKINPAILKSLIVSGSADHCSDFTIPIAISRKFPLPTPYRSANEDHNLSTVLPVYSASTSRH

Query:  SSNPLLSPEIASDKYPLTIFYNETVAVFHVSRDEFKSILRFAETGSS
        +S    S E+ S   P+TIFYN +V+VF VSR++   I++ A   +S
Subjt:  SSNPLLSPEIASDKYPLTIFYNETVAVFHVSRDEFKSILRFAETGSS

AT5G13220.2 jasmonate-zim-domain protein 107.3e-1238.78Show/hide
Query:  VELDFFAME----NQSAASKSSLF-RRQRSFKDIQSAISKINPAILKSLIVSGSADHCSDFTIPIAISRKFPLPTPYRSANEDHNLSTVLPVYSASTSRH
        +ELDF  +E    N +   K   F  R+RSF+DIQ AISKI+P I+KSL+ S   +  S      A SR  P  TP     ED     + PV       H
Subjt:  VELDFFAME----NQSAASKSSLF-RRQRSFKDIQSAISKINPAILKSLIVSGSADHCSDFTIPIAISRKFPLPTPYRSANEDHNLSTVLPVYSASTSRH

Query:  SSNPLLSPEIASDKYPLTIFYNETVAVFHVSRDEFKSILRFAETGSS
        +S    S E+ S   P+TIFYN +V+VF VSR++   I++ A   +S
Subjt:  SSNPLLSPEIASDKYPLTIFYNETVAVFHVSRDEFKSILRFAETGSS

AT5G13220.3 jasmonate-zim-domain protein 107.3e-1238.78Show/hide
Query:  VELDFFAME----NQSAASKSSLF-RRQRSFKDIQSAISKINPAILKSLIVSGSADHCSDFTIPIAISRKFPLPTPYRSANEDHNLSTVLPVYSASTSRH
        +ELDF  +E    N +   K   F  R+RSF+DIQ AISKI+P I+KSL+ S   +  S      A SR  P  TP     ED     + PV       H
Subjt:  VELDFFAME----NQSAASKSSLF-RRQRSFKDIQSAISKINPAILKSLIVSGSADHCSDFTIPIAISRKFPLPTPYRSANEDHNLSTVLPVYSASTSRH

Query:  SSNPLLSPEIASDKYPLTIFYNETVAVFHVSRDEFKSILRFAETGSS
        +S    S E+ S   P+TIFYN +V+VF VSR++   I++ A   +S
Subjt:  SSNPLLSPEIASDKYPLTIFYNETVAVFHVSRDEFKSILRFAETGSS

AT5G13220.4 jasmonate-zim-domain protein 109.5e-1236.75Show/hide
Query:  VELDFFAME----NQSAASKSSLF-RRQRSFKDIQSAISKINPAILKSLIVSGSADHCSDFTIPIAISRKFPLPTPYRSANEDHNLSTVLPVYSASTSRH
        +ELDF  +E    N +   K   F  R+RSF+DIQ AISKI+P I+KSL+ S   +  S      A SR  P  TP     ED     + PV       H
Subjt:  VELDFFAME----NQSAASKSSLF-RRQRSFKDIQSAISKINPAILKSLIVSGSADHCSDFTIPIAISRKFPLPTPYRSANEDHNLSTVLPVYSASTSRH

Query:  SSNPLLSPEIASDKYPLTIFYNETVAVFHVSRDEFKSILRFAETGSSASNGKGEAEKGKSMAEIPS
        +S    S E+ S   P+TIFYN +V+VF VSR++   I++ A   + A++ K E+     ++  PS
Subjt:  SSNPLLSPEIASDKYPLTIFYNETVAVFHVSRDEFKSILRFAETGSSASNGKGEAEKGKSMAEIPS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCATTGTTGAGCTTGATTTCTTCGCCATGGAAAATCAATCCGCTGCCTCAAAATCCTCTCTCTTCCGTCGCCAAAGAAGCTTCAAAGATATTCAGAGCGCCATTTC
CAAAATCAATCCTGCGATTCTCAAATCTCTTATTGTCTCTGGCTCTGCCGATCATTGTTCTGATTTCACTATTCCGATTGCGATTTCTCGGAAATTTCCATTGCCGACAC
CGTATCGGAGTGCTAATGAAGATCACAATCTCTCGACAGTACTGCCTGTTTATTCCGCATCTACATCTAGGCATTCTTCTAATCCTCTGTTGAGTCCAGAGATCGCTTCC
GATAAATATCCTCTAACGATTTTCTACAATGAAACCGTCGCCGTTTTCCACGTTTCTCGTGATGAGTTCAAAAGCATTCTGAGGTTTGCCGAAACGGGCAGCAGCGCTAG
CAATGGGAAGGGTGAAGCTGAAAAAGGAAAATCAATGGCTGAAATTCCTTCAAATCAGCACCAACGACTGGTGGACGTTGATCCTCAAGATGAGGGTACATCTTCCATTG
GCAAGGAAAAGGTCACTTCAGAGATTTTTGGAGAAGCGCAAGGAGAGGTAACAGCCCCCCCAATGTTGATTTACATAGCTTTCATTAGATATATGGTGAGATAA
mRNA sequenceShow/hide mRNA sequence
ATTGGACTCTGATCTTTCATAATCAAAATCCTTCACTCTCTTTCTCTCACACTTTCAGTTCGTTCCTCAAAATATGTCCATTGTTGAGCTTGATTTCTTCGCCATGGAAA
ATCAATCCGCTGCCTCAAAATCCTCTCTCTTCCGTCGCCAAAGAAGCTTCAAAGATATTCAGAGCGCCATTTCCAAAATCAATCCTGCGATTCTCAAATCTCTTATTGTC
TCTGGCTCTGCCGATCATTGTTCTGATTTCACTATTCCGATTGCGATTTCTCGGAAATTTCCATTGCCGACACCGTATCGGAGTGCTAATGAAGATCACAATCTCTCGAC
AGTACTGCCTGTTTATTCCGCATCTACATCTAGGCATTCTTCTAATCCTCTGTTGAGTCCAGAGATCGCTTCCGATAAATATCCTCTAACGATTTTCTACAATGAAACCG
TCGCCGTTTTCCACGTTTCTCGTGATGAGTTCAAAAGCATTCTGAGGTTTGCCGAAACGGGCAGCAGCGCTAGCAATGGGAAGGGTGAAGCTGAAAAAGGAAAATCAATG
GCTGAAATTCCTTCAAATCAGCACCAACGACTGGTGGACGTTGATCCTCAAGATGAGGGTACATCTTCCATTGGCAAGGAAAAGGTCACTTCAGAGATTTTTGGAGAAGC
GCAAGGAGAGGTAACAGCCCCCCCAATGTTGATTTACATAGCTTTCATTAGATATATGGTGAGATAATTTAATTCAGTCTACACTAGATTTCTCTGTTTATGTGTGATAC
ATATGCTAAAAACAAGATCAT
Protein sequenceShow/hide protein sequence
MSIVELDFFAMENQSAASKSSLFRRQRSFKDIQSAISKINPAILKSLIVSGSADHCSDFTIPIAISRKFPLPTPYRSANEDHNLSTVLPVYSASTSRHSSNPLLSPEIAS
DKYPLTIFYNETVAVFHVSRDEFKSILRFAETGSSASNGKGEAEKGKSMAEIPSNQHQRLVDVDPQDEGTSSIGKEKVTSEIFGEAQGEVTAPPMLIYIAFIRYMVR