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Lsi07G004090 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G004090
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionSerrate RNA effector molecule-like protein
Genome locationchr07:4403090..4409343
RNA-Seq ExpressionLsi07G004090
SyntenyLsi07G004090
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7018384.1 hypothetical protein SDJN02_20252, partial [Cucurbita argyrosperma subsp. argyrosperma]2.5e-3579.83Show/hide
Query:  ADLELKKKKEEEEKAKQIELEETEEIHEKNGDLQEVKTRLDKLEETIKEIAVESRKQSGIGIMTKNSEKGQDVDETKQGENIDPSKSTDDHLGEQKIVPA
        ADLELKKKK EEE  KQI+LEE EEIH+KN +LQEVKTRLDKLEETIKEIAVESRKQSG GI+TKNSEK Q VD+TK G NIDPSKS DDHLG QKIVPA
Subjt:  ADLELKKKKEEEEKAKQIELEETEEIHEKNGDLQEVKTRLDKLEETIKEIAVESRKQSGIGIMTKNSEKGQDVDETKQGENIDPSKSTDDHLGEQKIVPA

Query:  PVLPKGRASESTTREDDRN
        PVLPK RA  STT ED ++
Subjt:  PVLPKGRASESTTREDDRN

XP_004152172.1 uncharacterized protein LOC101207869 [Cucumis sativus]1.1e-3880.67Show/hide
Query:  ADLELKKKKEEEEKAKQIELEETEEIHEKNGDLQEVKTRLDKLEETIKEIAVESRKQSGIGIMTKNSEKGQDVDETKQGENIDPSKSTDDHLGEQKIVPA
        ADLELKKKKEEEEKAKQIELEETE+IHE N +LQEVKTRLDKLE TIKEIAVESRKQSG G +TKNSEKG+D  +TK G NID +KS DDHLG QKIVPA
Subjt:  ADLELKKKKEEEEKAKQIELEETEEIHEKNGDLQEVKTRLDKLEETIKEIAVESRKQSGIGIMTKNSEKGQDVDETKQGENIDPSKSTDDHLGEQKIVPA

Query:  PVLPKGRASESTTREDDRN
        PVLPKGR SESTTR+D ++
Subjt:  PVLPKGRASESTTREDDRN

XP_008454169.1 PREDICTED: uncharacterized protein LOC103494654 [Cucumis melo]3.2e-3880.67Show/hide
Query:  ADLELKKKKEEEEKAKQIELEETEEIHEKNGDLQEVKTRLDKLEETIKEIAVESRKQSGIGIMTKNSEKGQDVDETKQGENIDPSKSTDDHLGEQKIVPA
        ADLELKKKKEEEEKAKQIELEE E+IHE N +LQEVKTRLDKLE+TIKEIAVESRKQSG G +TKNSEKG+D  +TK G NIDP+KS DDHLG QKIVPA
Subjt:  ADLELKKKKEEEEKAKQIELEETEEIHEKNGDLQEVKTRLDKLEETIKEIAVESRKQSGIGIMTKNSEKGQDVDETKQGENIDPSKSTDDHLGEQKIVPA

Query:  PVLPKGRASESTTREDDRN
        PVLPK  ASESTTRED ++
Subjt:  PVLPKGRASESTTREDDRN

XP_022980157.1 uncharacterized protein LOC111479631 [Cucurbita maxima]1.9e-3579.83Show/hide
Query:  ADLELKKKKEEEEKAKQIELEETEEIHEKNGDLQEVKTRLDKLEETIKEIAVESRKQSGIGIMTKNSEKGQDVDETKQGENIDPSKSTDDHLGEQKIVPA
        ADLELKKKK EEE AKQI+L+E EEIH+KN +LQEVKTRLDKLEETIKEIAVESRKQSG GI+TKNSEK Q VD+TK G NIDPSKS DDHLG QKIVPA
Subjt:  ADLELKKKKEEEEKAKQIELEETEEIHEKNGDLQEVKTRLDKLEETIKEIAVESRKQSGIGIMTKNSEKGQDVDETKQGENIDPSKSTDDHLGEQKIVPA

Query:  PVLPKGRASESTTREDDRN
        PVLPK RA  STT ED ++
Subjt:  PVLPKGRASESTTREDDRN

XP_038901255.1 uncharacterized protein LOC120088201 [Benincasa hispida]1.6e-4286.55Show/hide
Query:  ADLELKKKKEEEEKAKQIELEETEEIHEKNGDLQEVKTRLDKLEETIKEIAVESRKQSGIGIMTKNSEKGQDVDETKQGENIDPSKSTDDHLGEQKIVPA
        ADLELKKKKEEEEKAKQ+ELEETEEIHEKN +LQEVK RLDKLEETIKEIAVE RKQSG GI+TKNSEKGQDVD+TK G NIDPSKS DD LG QKIVPA
Subjt:  ADLELKKKKEEEEKAKQIELEETEEIHEKNGDLQEVKTRLDKLEETIKEIAVESRKQSGIGIMTKNSEKGQDVDETKQGENIDPSKSTDDHLGEQKIVPA

Query:  PVLPKGRASESTTREDDRN
        PVLPKGRASESTTRED ++
Subjt:  PVLPKGRASESTTREDDRN

TrEMBL top hitse value%identityAlignment
A0A0A0KTR7 Uncharacterized protein5.3e-3980.67Show/hide
Query:  ADLELKKKKEEEEKAKQIELEETEEIHEKNGDLQEVKTRLDKLEETIKEIAVESRKQSGIGIMTKNSEKGQDVDETKQGENIDPSKSTDDHLGEQKIVPA
        ADLELKKKKEEEEKAKQIELEETE+IHE N +LQEVKTRLDKLE TIKEIAVESRKQSG G +TKNSEKG+D  +TK G NID +KS DDHLG QKIVPA
Subjt:  ADLELKKKKEEEEKAKQIELEETEEIHEKNGDLQEVKTRLDKLEETIKEIAVESRKQSGIGIMTKNSEKGQDVDETKQGENIDPSKSTDDHLGEQKIVPA

Query:  PVLPKGRASESTTREDDRN
        PVLPKGR SESTTR+D ++
Subjt:  PVLPKGRASESTTREDDRN

A0A1S3BZ75 uncharacterized protein LOC1034946541.5e-3880.67Show/hide
Query:  ADLELKKKKEEEEKAKQIELEETEEIHEKNGDLQEVKTRLDKLEETIKEIAVESRKQSGIGIMTKNSEKGQDVDETKQGENIDPSKSTDDHLGEQKIVPA
        ADLELKKKKEEEEKAKQIELEE E+IHE N +LQEVKTRLDKLE+TIKEIAVESRKQSG G +TKNSEKG+D  +TK G NIDP+KS DDHLG QKIVPA
Subjt:  ADLELKKKKEEEEKAKQIELEETEEIHEKNGDLQEVKTRLDKLEETIKEIAVESRKQSGIGIMTKNSEKGQDVDETKQGENIDPSKSTDDHLGEQKIVPA

Query:  PVLPKGRASESTTREDDRN
        PVLPK  ASESTTRED ++
Subjt:  PVLPKGRASESTTREDDRN

A0A6J1DGT5 uncharacterized protein LOC1110209343.2e-2868.55Show/hide
Query:  ADLELKKKKEEEEKAKQIELEETEEIHEKNGDLQEVKTRLDKLEETIKEIAVESRKQSGIGIMTKNSEKGQDVDETKQGEN-----IDPSKSTDDHLGEQ
        ADLELK+KKEEEEKAKQ+ELEETEEI EKN +LQEVK RLDKLEETIKEIAVESRK SG G   KNSEK ++  + K GEN      + SKS +DHLG Q
Subjt:  ADLELKKKKEEEEKAKQIELEETEEIHEKNGDLQEVKTRLDKLEETIKEIAVESRKQSGIGIMTKNSEKGQDVDETKQGEN-----IDPSKSTDDHLGEQ

Query:  KIVPAPVLPKGRASESTTREDDRN
        KI  APVLPKGR SEST++E+ ++
Subjt:  KIVPAPVLPKGRASESTTREDDRN

A0A6J1GVZ5 uncharacterized protein LOC1114579851.2e-3580.67Show/hide
Query:  ADLELKKKKEEEEKAKQIELEETEEIHEKNGDLQEVKTRLDKLEETIKEIAVESRKQSGIGIMTKNSEKGQDVDETKQGENIDPSKSTDDHLGEQKIVPA
        ADLELKKKK EEE AKQI+LEE EEIH+KN +LQEVKTRLDKLEETIKEIAVESRKQSG GI+TKNSEK Q VD+TK G NIDPSKS DDHLG QKIVPA
Subjt:  ADLELKKKKEEEEKAKQIELEETEEIHEKNGDLQEVKTRLDKLEETIKEIAVESRKQSGIGIMTKNSEKGQDVDETKQGENIDPSKSTDDHLGEQKIVPA

Query:  PVLPKGRASESTTREDDRN
        PVLPK RA  STT ED ++
Subjt:  PVLPKGRASESTTREDDRN

A0A6J1IQM5 uncharacterized protein LOC1114796319.3e-3679.83Show/hide
Query:  ADLELKKKKEEEEKAKQIELEETEEIHEKNGDLQEVKTRLDKLEETIKEIAVESRKQSGIGIMTKNSEKGQDVDETKQGENIDPSKSTDDHLGEQKIVPA
        ADLELKKKK EEE AKQI+L+E EEIH+KN +LQEVKTRLDKLEETIKEIAVESRKQSG GI+TKNSEK Q VD+TK G NIDPSKS DDHLG QKIVPA
Subjt:  ADLELKKKKEEEEKAKQIELEETEEIHEKNGDLQEVKTRLDKLEETIKEIAVESRKQSGIGIMTKNSEKGQDVDETKQGENIDPSKSTDDHLGEQKIVPA

Query:  PVLPKGRASESTTREDDRN
        PVLPK RA  STT ED ++
Subjt:  PVLPKGRASESTTREDDRN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGATCTGGAGCTGAAAAAGAAGAAAGAAGAAGAAGAGAAAGCTAAACAAATAGAGTTAGAAGAGACTGAAGAAATTCATGAAAAAAACGGGGATCTTCAGGAGGT
AAAGACAAGACTCGATAAACTTGAGGAAACTATAAAGGAAATTGCTGTTGAATCCAGAAAACAATCAGGGATTGGTATTATGACAAAGAACTCTGAAAAGGGTCAAGACG
TTGATGAAACCAAACAGGGGGAAAATATTGATCCAAGCAAGTCTACGGATGACCATCTTGGTGAACAAAAAATAGTACCGGCTCCAGTTTTGCCCAAAGGTCGTGCAAGT
GAGTCTACAACACGAGAAGATGATCGTAACTCATTGTATGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGATCTGGAGCTGAAAAAGAAGAAAGAAGAAGAAGAGAAAGCTAAACAAATAGAGTTAGAAGAGACTGAAGAAATTCATGAAAAAAACGGGGATCTTCAGGAGGT
AAAGACAAGACTCGATAAACTTGAGGAAACTATAAAGGAAATTGCTGTTGAATCCAGAAAACAATCAGGGATTGGTATTATGACAAAGAACTCTGAAAAGGGTCAAGACG
TTGATGAAACCAAACAGGGGGAAAATATTGATCCAAGCAAGTCTACGGATGACCATCTTGGTGAACAAAAAATAGTACCGGCTCCAGTTTTGCCCAAAGGTCGTGCAAGT
GAGTCTACAACACGAGAAGATGATCGTAACTCATTGTATGAATGA
Protein sequenceShow/hide protein sequence
MADLELKKKKEEEEKAKQIELEETEEIHEKNGDLQEVKTRLDKLEETIKEIAVESRKQSGIGIMTKNSEKGQDVDETKQGENIDPSKSTDDHLGEQKIVPAPVLPKGRAS
ESTTREDDRNSLYE