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Lsi07G004150 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G004150
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr07:4454170..4456046
RNA-Seq ExpressionLsi07G004150
SyntenyLsi07G004150
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004152177.2 uncharacterized protein LOC101209077 isoform X1 [Cucumis sativus]1.2e-5378.62Show/hide
Query:  MAAAATATGVLKIGVPAP----------AKPGKQPTSFARLAIRYPNCFLNTRLKFPVIRALGQGGNPSGNDDTDAGDFINQEDVQFLLKLAAGSIAGGC
        MAA ATATGVLKIGVPAP          AK G+ PT+FA L +RYPN FLNTR+KFP +RALGQGGNPSG+DD DAG FINQEDV+FLLKL AGSIAGG 
Subjt:  MAAAATATGVLKIGVPAP----------AKPGKQPTSFARLAIRYPNCFLNTRLKFPVIRALGQGGNPSGNDDTDAGDFINQEDVQFLLKLAAGSIAGGC

Query:  GIKYGSIIFPEITKPNIVQALIMISAPVFVAIWLLIKQSREERQS
        GIKYGSIIFPEITKPNIVQALIMIS PV VAIWLLIKQSREE QS
Subjt:  GIKYGSIIFPEITKPNIVQALIMISAPVFVAIWLLIKQSREERQS

XP_008454177.1 PREDICTED: uncharacterized protein LOC103494660 [Cucumis melo]1.0e-5281.02Show/hide
Query:  MAAAATATGVLKIGVPAP--AKPGKQPTSFARLAIRYPNCFLNTRLKFPVIRALGQGGNPSGNDDTDAGDFINQEDVQFLLKLAAGSIAGGCGIKYGSII
        MAA ATATGVLK G PAP  AK G+  T+FARL +RYPN FLNTR+KFP +RALGQGG PSGNDD DAG FINQEDV+F LKL AGSIAGG GIKYGSII
Subjt:  MAAAATATGVLKIGVPAP--AKPGKQPTSFARLAIRYPNCFLNTRLKFPVIRALGQGGNPSGNDDTDAGDFINQEDVQFLLKLAAGSIAGGCGIKYGSII

Query:  FPEITKPNIVQALIMISAPVFVAIWLLIKQSREERQS
        FPEITKPNIVQALIMIS PV VAIWLLIKQSREE QS
Subjt:  FPEITKPNIVQALIMISAPVFVAIWLLIKQSREERQS

XP_022153461.1 uncharacterized protein LOC111020963 [Momordica charantia]6.7e-4975.54Show/hide
Query:  AAAATATGVLKIGVPAPAKPGKQPTSFARLAIRYPNCFLNTRLKFPVIRAL-----GQGGNPSGNDDTDAGDFINQEDVQFLLKLAAGSIAGGCGIKYGS
        A AATATG LKIG+PAP KP K+ T+F RL +RYPNC LNT  K   IRAL     G+GGN SG+DDT AGDFINQEDVQFLLKL AGSIAGG GIKYGS
Subjt:  AAAATATGVLKIGVPAPAKPGKQPTSFARLAIRYPNCFLNTRLKFPVIRAL-----GQGGNPSGNDDTDAGDFINQEDVQFLLKLAAGSIAGGCGIKYGS

Query:  IIFPEITKPNIVQALIMISAPVFVAIWLLIKQSREERQS
        IIFP+I KPN+VQALIMIS PV +AIWLLIKQSREERQS
Subjt:  IIFPEITKPNIVQALIMISAPVFVAIWLLIKQSREERQS

XP_022980152.1 uncharacterized protein LOC111479627 isoform X1 [Cucurbita maxima]1.8e-4970.55Show/hide
Query:  GEQLR---EEAKIISRWPLKERKIIEKMAAAATATGVLKIGVPAPAKPGKQ-PTSFARLAIRYPNCFLNTRLKFPVIRALGQGGNPSGNDDTDAGDFINQ
        G+QLR   E AKII RWPLKE++I EKM + A AT  LKIGVPAP K  K+ PT+F RLA+ YPNCFLNTR K P IRALGQ GN SG DD D G  I+Q
Subjt:  GEQLR---EEAKIISRWPLKERKIIEKMAAAATATGVLKIGVPAPAKPGKQ-PTSFARLAIRYPNCFLNTRLKFPVIRALGQGGNPSGNDDTDAGDFINQ

Query:  EDVQFLLKLAAGSIAGGCGIKYGSIIFPEITKPNIVQALIMISAPVFVAIWLLIKQSREERQS
        +DVQF+LK+AAGSIA G GIKYGSIIFPE+TKPNIVQALIM+S PV VAI LLI QSR++RQS
Subjt:  EDVQFLLKLAAGSIAGGCGIKYGSIIFPEITKPNIVQALIMISAPVFVAIWLLIKQSREERQS

XP_038902938.1 uncharacterized protein LOC120089511 [Benincasa hispida]1.3e-6088.89Show/hide
Query:  MAAAATATGVLKIGVPAPAKPGKQPTSFARLAIRYPNCFLNTRLKFPVIRALGQGGNPSGNDDTDAGDFINQEDVQFLLKLAAGSIAGGCGIKYGSIIFP
        MAAA T TG LKIG+PAPAK  K+PT+FARL +RYPNCFLNTRLKFP IRALGQGGNPSGNDDTDAG FINQEDVQFLLKLAAGSIAGGCGIKYGSIIFP
Subjt:  MAAAATATGVLKIGVPAPAKPGKQPTSFARLAIRYPNCFLNTRLKFPVIRALGQGGNPSGNDDTDAGDFINQEDVQFLLKLAAGSIAGGCGIKYGSIIFP

Query:  EITKPNIVQALIMISAPVFVAIWLLIKQSREERQS
        E+TKPNIVQALIMISAPV VAIWLLI QSREERQS
Subjt:  EITKPNIVQALIMISAPVFVAIWLLIKQSREERQS

TrEMBL top hitse value%identityAlignment
A0A0A0KWZ3 Uncharacterized protein5.7e-5478.62Show/hide
Query:  MAAAATATGVLKIGVPAP----------AKPGKQPTSFARLAIRYPNCFLNTRLKFPVIRALGQGGNPSGNDDTDAGDFINQEDVQFLLKLAAGSIAGGC
        MAA ATATGVLKIGVPAP          AK G+ PT+FA L +RYPN FLNTR+KFP +RALGQGGNPSG+DD DAG FINQEDV+FLLKL AGSIAGG 
Subjt:  MAAAATATGVLKIGVPAP----------AKPGKQPTSFARLAIRYPNCFLNTRLKFPVIRALGQGGNPSGNDDTDAGDFINQEDVQFLLKLAAGSIAGGC

Query:  GIKYGSIIFPEITKPNIVQALIMISAPVFVAIWLLIKQSREERQS
        GIKYGSIIFPEITKPNIVQALIMIS PV VAIWLLIKQSREE QS
Subjt:  GIKYGSIIFPEITKPNIVQALIMISAPVFVAIWLLIKQSREERQS

A0A1S4E0N1 uncharacterized protein LOC1034946604.8e-5381.02Show/hide
Query:  MAAAATATGVLKIGVPAP--AKPGKQPTSFARLAIRYPNCFLNTRLKFPVIRALGQGGNPSGNDDTDAGDFINQEDVQFLLKLAAGSIAGGCGIKYGSII
        MAA ATATGVLK G PAP  AK G+  T+FARL +RYPN FLNTR+KFP +RALGQGG PSGNDD DAG FINQEDV+F LKL AGSIAGG GIKYGSII
Subjt:  MAAAATATGVLKIGVPAP--AKPGKQPTSFARLAIRYPNCFLNTRLKFPVIRALGQGGNPSGNDDTDAGDFINQEDVQFLLKLAAGSIAGGCGIKYGSII

Query:  FPEITKPNIVQALIMISAPVFVAIWLLIKQSREERQS
        FPEITKPNIVQALIMIS PV VAIWLLIKQSREE QS
Subjt:  FPEITKPNIVQALIMISAPVFVAIWLLIKQSREERQS

A0A6J1DKQ3 uncharacterized protein LOC1110209633.3e-4975.54Show/hide
Query:  AAAATATGVLKIGVPAPAKPGKQPTSFARLAIRYPNCFLNTRLKFPVIRAL-----GQGGNPSGNDDTDAGDFINQEDVQFLLKLAAGSIAGGCGIKYGS
        A AATATG LKIG+PAP KP K+ T+F RL +RYPNC LNT  K   IRAL     G+GGN SG+DDT AGDFINQEDVQFLLKL AGSIAGG GIKYGS
Subjt:  AAAATATGVLKIGVPAPAKPGKQPTSFARLAIRYPNCFLNTRLKFPVIRAL-----GQGGNPSGNDDTDAGDFINQEDVQFLLKLAAGSIAGGCGIKYGS

Query:  IIFPEITKPNIVQALIMISAPVFVAIWLLIKQSREERQS
        IIFP+I KPN+VQALIMIS PV +AIWLLIKQSREERQS
Subjt:  IIFPEITKPNIVQALIMISAPVFVAIWLLIKQSREERQS

A0A6J1GTV4 uncharacterized protein LOC111457518 isoform X13.1e-4474.26Show/hide
Query:  MAAAATATGVLKIGVPAPAKPGKQ-PTSFARLAIRYPNCFLNTRLKFPVIRALGQGGNPSGNDDTDAGDFINQEDVQFLLKLAAGSIAGGCGIKYGSIIF
        MAA A ATG  KIGVPAP K  K+ PT+F RL +RYPNCFLNTR K P IRALGQ GN SG DD D G  I+QEDVQF+LK+AAGSIA G GIKYGSIIF
Subjt:  MAAAATATGVLKIGVPAPAKPGKQ-PTSFARLAIRYPNCFLNTRLKFPVIRALGQGGNPSGNDDTDAGDFINQEDVQFLLKLAAGSIAGGCGIKYGSIIF

Query:  PEITKPNIVQALIMISAPVFVAIWLLIKQSREERQS
        PE+TKPNIVQALIM+S PV VAIWLLI QSR++RQS
Subjt:  PEITKPNIVQALIMISAPVFVAIWLLIKQSREERQS

A0A6J1IQM2 uncharacterized protein LOC111479627 isoform X18.6e-5070.55Show/hide
Query:  GEQLR---EEAKIISRWPLKERKIIEKMAAAATATGVLKIGVPAPAKPGKQ-PTSFARLAIRYPNCFLNTRLKFPVIRALGQGGNPSGNDDTDAGDFINQ
        G+QLR   E AKII RWPLKE++I EKM + A AT  LKIGVPAP K  K+ PT+F RLA+ YPNCFLNTR K P IRALGQ GN SG DD D G  I+Q
Subjt:  GEQLR---EEAKIISRWPLKERKIIEKMAAAATATGVLKIGVPAPAKPGKQ-PTSFARLAIRYPNCFLNTRLKFPVIRALGQGGNPSGNDDTDAGDFINQ

Query:  EDVQFLLKLAAGSIAGGCGIKYGSIIFPEITKPNIVQALIMISAPVFVAIWLLIKQSREERQS
        +DVQF+LK+AAGSIA G GIKYGSIIFPE+TKPNIVQALIM+S PV VAI LLI QSR++RQS
Subjt:  EDVQFLLKLAAGSIAGGCGIKYGSIIFPEITKPNIVQALIMISAPVFVAIWLLIKQSREERQS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G15900.1 unknown protein9.1e-1233.88Show/hide
Query:  LKIGVPAPAKPGK-----QPT-SFARLAIRYPNCFLNTRLKFPVIRALGQGGNPSGNDDTDAGDFINQEDVQFLLKLAAGSIAGGCGIKYGSIIFPEITK
        + IGVP  ++        +PT      ++++   F N        R+     +   ++  D G  I QED+ +LLK+  GS+AG   IKYGS++FP+IT+
Subjt:  LKIGVPAPAKPGK-----QPT-SFARLAIRYPNCFLNTRLKFPVIRALGQGGNPSGNDDTDAGDFINQEDVQFLLKLAAGSIAGGCGIKYGSIIFPEITK

Query:  PNIVQALIMISAPVFVAIWLL
        PN+  AL +I APV +++ LL
Subjt:  PNIVQALIMISAPVFVAIWLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCATGAACATCACTAGTGGAAACCAATGTAATGACAATTTTATGAGAATTTTATTTAAAATTTTTCCCATTAATTTTAAATATTTTATTTCTTGTGGAGAAAAAAA
CAAGAATGGACCAATCAGAACTTTGCGCACGTGGCACGCTGGCGAACAACTACGGGAAGAAGCAAAGATAATTTCGCGGTGGCCGTTAAAAGAAAGGAAGATAATAGAGA
AAATGGCAGCGGCGGCGACGGCGACGGGAGTCTTGAAGATCGGCGTTCCGGCTCCGGCCAAACCAGGAAAGCAGCCGACGAGTTTCGCAAGGCTCGCAATTCGCTATCCA
AATTGCTTTCTCAATACGCGGCTGAAATTTCCTGTCATTCGAGCACTTGGACAAGGAGGGAATCCGAGCGGCAACGACGACACCGATGCCGGCGATTTCATCAATCAGGA
GGATGTTCAATTTTTGTTGAAATTGGCGGCAGGTTCCATAGCAGGGGGATGTGGAATAAAGTATGGAAGCATAATATTTCCAGAGATAACCAAACCCAACATCGTACAAG
CTCTTATCATGATATCAGCTCCTGTGTTTGTAGCCATATGGCTTTTGATCAAGCAAAGTCGTGAAGAGAGACAAAGCTAA
mRNA sequenceShow/hide mRNA sequence
CTTCTTCACTCCCTCTTCCATTCCCTACCTAAACGAAAAATCTCATCCCGTTCGGGCATGGGTCCCACATGGCCATGAACATCACTAGTGGAAACCAATGTAATGACAAT
TTTATGAGAATTTTATTTAAAATTTTTCCCATTAATTTTAAATATTTTATTTCTTGTGGAGAAAAAAACAAGAATGGACCAATCAGAACTTTGCGCACGTGGCACGCTGG
CGAACAACTACGGGAAGAAGCAAAGATAATTTCGCGGTGGCCGTTAAAAGAAAGGAAGATAATAGAGAAAATGGCAGCGGCGGCGACGGCGACGGGAGTCTTGAAGATCG
GCGTTCCGGCTCCGGCCAAACCAGGAAAGCAGCCGACGAGTTTCGCAAGGCTCGCAATTCGCTATCCAAATTGCTTTCTCAATACGCGGCTGAAATTTCCTGTCATTCGA
GCACTTGGACAAGGAGGGAATCCGAGCGGCAACGACGACACCGATGCCGGCGATTTCATCAATCAGGAGGATGTTCAATTTTTGTTGAAATTGGCGGCAGGTTCCATAGC
AGGGGGATGTGGAATAAAGTATGGAAGCATAATATTTCCAGAGATAACCAAACCCAACATCGTACAAGCTCTTATCATGATATCAGCTCCTGTGTTTGTAGCCATATGGC
TTTTGATCAAGCAAAGTCGTGAAGAGAGACAAAGCTAACAATCTACTACTTTCATTTTTACAAAATGAATTGATTTTAACCATCCAAAAGCCCTTTTTTTTTCTTTGTAA
TATATATAGTCCTTGTTAAAAGCACTAGAAATTGAATACAGATGAAGCACTTCTTTACAGTTTTGCTATCATGCTTGCTGGATCATCTTCATTGTAAAAGTTAATACTAA
GAATAGAAATCATGCTCTTCGATC
Protein sequenceShow/hide protein sequence
MAMNITSGNQCNDNFMRILFKIFPINFKYFISCGEKNKNGPIRTLRTWHAGEQLREEAKIISRWPLKERKIIEKMAAAATATGVLKIGVPAPAKPGKQPTSFARLAIRYP
NCFLNTRLKFPVIRALGQGGNPSGNDDTDAGDFINQEDVQFLLKLAAGSIAGGCGIKYGSIIFPEITKPNIVQALIMISAPVFVAIWLLIKQSREERQS