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Lsi07G004240 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G004240
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionCalcium-binding EF-hand family protein
Genome locationchr07:4496980..4498107
RNA-Seq ExpressionLsi07G004240
SyntenyLsi07G004240
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8649065.1 hypothetical protein Csa_014725 [Cucumis sativus]2.5e-6781.82Show/hide
Query:  MAEDQKRCHGHGTEADGSSHEMILRAFDRNGVAKNSWKDGNSSRVKACEVEKISRRLSILEEGTRTMKKDLFNSLEERRNLVYEINQQFQIINKGHTFSN
        MAE QKR HGHGTEADGSSHEM+LR FDRNGVAKNS KDG++S VKACEVEKI RRLSILEE TR MKK LF+SLEERRNLVYEINQQFQIINK H   N
Subjt:  MAEDQKRCHGHGTEADGSSHEMILRAFDRNGVAKNSWKDGNSSRVKACEVEKISRRLSILEEGTRTMKKDLFNSLEERRNLVYEINQQFQIINKGHTFSN

Query:  EVAAALMAYLEDDDETLHPPKEWKRGVGLSEIFDHQPNISLVFKHFKANSLAWTDSTKSLHLIRE
        EVAAALMA LED DETLH PKEW+ GVGLSEIF  Q NISLVFKHFK N LA+T+STKSLHL+RE
Subjt:  EVAAALMAYLEDDDETLHPPKEWKRGVGLSEIFDHQPNISLVFKHFKANSLAWTDSTKSLHLIRE

XP_011652992.1 uncharacterized protein LOC105435163 isoform X1 [Cucumis sativus]2.5e-6781.82Show/hide
Query:  MAEDQKRCHGHGTEADGSSHEMILRAFDRNGVAKNSWKDGNSSRVKACEVEKISRRLSILEEGTRTMKKDLFNSLEERRNLVYEINQQFQIINKGHTFSN
        MAE QKR HGHGTEADGSSHEM+LR FDRNGVAKNS KDG++S VKACEVEKI RRLSILEE TR MKK LF+SLEERRNLVYEINQQFQIINK H   N
Subjt:  MAEDQKRCHGHGTEADGSSHEMILRAFDRNGVAKNSWKDGNSSRVKACEVEKISRRLSILEEGTRTMKKDLFNSLEERRNLVYEINQQFQIINKGHTFSN

Query:  EVAAALMAYLEDDDETLHPPKEWKRGVGLSEIFDHQPNISLVFKHFKANSLAWTDSTKSLHLIRE
        EVAAALMA LED DETLH PKEW+ GVGLSEIF  Q NISLVFKHFK N LA+T+STKSLHL+RE
Subjt:  EVAAALMAYLEDDDETLHPPKEWKRGVGLSEIFDHQPNISLVFKHFKANSLAWTDSTKSLHLIRE

XP_011652993.1 uncharacterized protein LOC105435163 isoform X2 [Cucumis sativus]7.7e-5680.56Show/hide
Query:  MILRAFDRNGVAKNSWKDGNSSRVKACEVEKISRRLSILEEGTRTMKKDLFNSLEERRNLVYEINQQFQIINKGHTFSNEVAAALMAYLEDDDETLHPPK
        M+LR FDRNGVAKNS KDG++S VKACEVEKI RRLSILEE TR MKK LF+SLEERRNLVYEINQQFQIINK H   NEVAAALMA LED DETLH PK
Subjt:  MILRAFDRNGVAKNSWKDGNSSRVKACEVEKISRRLSILEEGTRTMKKDLFNSLEERRNLVYEINQQFQIINKGHTFSNEVAAALMAYLEDDDETLHPPK

Query:  EWKRGVGLSEIFDHQPNISLVFKHFKANSLAWTDSTKSLHLIRE
        EW+ GVGLSEIF  Q NISLVFKHFK N LA+T+STKSLHL+RE
Subjt:  EWKRGVGLSEIFDHQPNISLVFKHFKANSLAWTDSTKSLHLIRE

XP_022153486.1 uncharacterized protein LOC111020982 [Momordica charantia]2.7e-5370.99Show/hide
Query:  MAEDQKRCHGHGTEADGSSHEMILRAFDRNGVAKNSWKDGNSSRVKACEVEKISRRLSILEEGTRTMKKDLFNSLEERRNLVYEINQQFQIINKGHTFSN
        MAE Q+  H H  EADGS HEM+LRAFD+NGVAK   KD   SRVKACEVEKISRRL+ILEE TR MKK LF+SLEE RNLVYEINQQFQ INK H   N
Subjt:  MAEDQKRCHGHGTEADGSSHEMILRAFDRNGVAKNSWKDGNSSRVKACEVEKISRRLSILEEGTRTMKKDLFNSLEERRNLVYEINQQFQIINKGHTFSN

Query:  EVAAALMAYLEDDDETLHPPKEWKRGVGLSEIFDHQPNISLVFKHFKANSLAWTDSTKSLHL
        EVA+  MA LED DETL+ PK W+ GVGLSEIF HQPN+SLVFKHFKA  LA   S KS  L
Subjt:  EVAAALMAYLEDDDETLHPPKEWKRGVGLSEIFDHQPNISLVFKHFKANSLAWTDSTKSLHL

XP_038898278.1 uncharacterized protein LOC120085919 isoform X2 [Benincasa hispida]5.3e-6578.92Show/hide
Query:  MAEDQKRCHGHGTEADGSSHEMILRAFDRNGVAKNSWKDGNSSRVKACEVEKISRRLSILEEGTRTMKKDLFNSLEERRNLVYEINQQFQIINKGHTFSN
        M E QKR HGHGTEADGS+HE++L AFDRNG AKNS K G +SRV+ACEVE ISRRLSILEE TR MKK LFN+LEE RNLVYEINQQFQ IN+ HTF N
Subjt:  MAEDQKRCHGHGTEADGSSHEMILRAFDRNGVAKNSWKDGNSSRVKACEVEKISRRLSILEEGTRTMKKDLFNSLEERRNLVYEINQQFQIINKGHTFSN

Query:  EVAAALMAYLEDDDETLHPPKEWKRGVGLSEIFDHQPNISLVFKHFKANSLAWTDSTKSLHLIREK
        EVAAALMA LED DETLH PKEW+ GVGLSEIF HQ NISLVFKHFKAN LA TDS KSLHL++EK
Subjt:  EVAAALMAYLEDDDETLHPPKEWKRGVGLSEIFDHQPNISLVFKHFKANSLAWTDSTKSLHLIREK

TrEMBL top hitse value%identityAlignment
A0A0A0KVL6 Uncharacterized protein4.1e-4783.47Show/hide
Query:  MAEDQKRCHGHGTEADGSSHEMILRAFDRNGVAKNSWKDGNSSRVKACEVEKISRRLSILEEGTRTMKKDLFNSLEERRNLVYEINQQFQIINKGHTFSN
        MAE QKR HGHGTEADGSSHEM+LR FDRNGVAKNS KDG++S VKACEVEKI RRLSILEE TR MKK LF+SLEERRNLVYEINQQFQIINK H   N
Subjt:  MAEDQKRCHGHGTEADGSSHEMILRAFDRNGVAKNSWKDGNSSRVKACEVEKISRRLSILEEGTRTMKKDLFNSLEERRNLVYEINQQFQIINKGHTFSN

Query:  EVAAALMAYLEDDDETLHPPK
        EVAAALMA LED DETLH PK
Subjt:  EVAAALMAYLEDDDETLHPPK

A0A1S4DZN5 uncharacterized protein LOC103494669 isoform X37.3e-5277.78Show/hide
Query:  MILRAFDRNGVAKNSWKDGNSSRVKACEVEKISRRLSILEEGTRTMKKDLFNSLEERRNLVYEINQQFQIINKGHTFSNEVAAALMAYLEDDDETLHPPK
        M+LR FDRNGVAK S K G+ SRVKACEVE+I RRL+ILEE TR MKK LF+SLEER+NLVYEINQQFQIINK H   NEV AALMA LED DETLH PK
Subjt:  MILRAFDRNGVAKNSWKDGNSSRVKACEVEKISRRLSILEEGTRTMKKDLFNSLEERRNLVYEINQQFQIINKGHTFSNEVAAALMAYLEDDDETLHPPK

Query:  EWKRGVGLSEIFDHQPNISLVFKHFKANSLAWTDSTKSLHLIRE
        E + GVGLSEIF HQ NISLVFKHFK N LA+TDSTKSLHL+RE
Subjt:  EWKRGVGLSEIFDHQPNISLVFKHFKANSLAWTDSTKSLHLIRE

A0A6J1DKS8 uncharacterized protein LOC1110209821.3e-5370.99Show/hide
Query:  MAEDQKRCHGHGTEADGSSHEMILRAFDRNGVAKNSWKDGNSSRVKACEVEKISRRLSILEEGTRTMKKDLFNSLEERRNLVYEINQQFQIINKGHTFSN
        MAE Q+  H H  EADGS HEM+LRAFD+NGVAK   KD   SRVKACEVEKISRRL+ILEE TR MKK LF+SLEE RNLVYEINQQFQ INK H   N
Subjt:  MAEDQKRCHGHGTEADGSSHEMILRAFDRNGVAKNSWKDGNSSRVKACEVEKISRRLSILEEGTRTMKKDLFNSLEERRNLVYEINQQFQIINKGHTFSN

Query:  EVAAALMAYLEDDDETLHPPKEWKRGVGLSEIFDHQPNISLVFKHFKANSLAWTDSTKSLHL
        EVA+  MA LED DETL+ PK W+ GVGLSEIF HQPN+SLVFKHFKA  LA   S KS  L
Subjt:  EVAAALMAYLEDDDETLHPPKEWKRGVGLSEIFDHQPNISLVFKHFKANSLAWTDSTKSLHL

A0A6J1GYP8 uncharacterized protein LOC1114580523.1e-5070.97Show/hide
Query:  MAEDQKRCHGHGTEADGSSHEMILRAFDRNGVAKNSWKDGNSSRVKACEVEKISRRLSILEEGTRTMKKDLFNSLEERRNLVYEINQQFQIINKGHTFSN
        MAE QKR  GHG E D S HE  LRAFD+NGV +NS KDG S RVK CEVEKISRRLS+LEE TR MKK LF SLEERRNL+YEINQQFQ I+K H   N
Subjt:  MAEDQKRCHGHGTEADGSSHEMILRAFDRNGVAKNSWKDGNSSRVKACEVEKISRRLSILEEGTRTMKKDLFNSLEERRNLVYEINQQFQIINKGHTFSN

Query:  EVAAALMAYLEDDDETLHPPKEWKRGVGLSEIFDHQPNISLVFKHFKANSLAWTD
        EVA       ED DETL  P+EW+RGVGLS+IF HQPNISLVFKHFK N LA+TD
Subjt:  EVAAALMAYLEDDDETLHPPKEWKRGVGLSEIFDHQPNISLVFKHFKANSLAWTD

A0A6J1ISW5 uncharacterized protein LOC1114796418.9e-5067.47Show/hide
Query:  MAEDQKRCHGHGTEADGSSHEMILRAFDRNGVAKNSWKDGNSSRVKACEVEKISRRLSILEEGTRTMKKDLFNSLEERRNLVYEINQQFQIINKGHTFSN
        MAE+QKR  GHG E D S HE  LRAFD+NGV +NS KDG S RV+ CEVEKISRRLS+LEE TR MKK LF SLEERRNLVYEINQQFQ I+K H   N
Subjt:  MAEDQKRCHGHGTEADGSSHEMILRAFDRNGVAKNSWKDGNSSRVKACEVEKISRRLSILEEGTRTMKKDLFNSLEERRNLVYEINQQFQIINKGHTFSN

Query:  EVAAALMAYLEDDDETLHPPKEWKRGVGLSEIFDHQPNISLVFKHFKANSLAWTDSTKSLHLIREK
        EVA       ED DETL  P+EW+RG GLS+IF HQPNISLVFKHFK N LA++D     +L REK
Subjt:  EVAAALMAYLEDDDETLHPPKEWKRGVGLSEIFDHQPNISLVFKHFKANSLAWTDSTKSLHLIREK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGAAGACCAAAAACGCTGTCATGGTCATGGAACTGAAGCAGATGGTTCAAGTCATGAGATGATTTTAAGAGCATTTGATCGAAATGGGGTTGCAAAAAACTCGTG
GAAAGATGGCAACAGTTCGAGAGTGAAAGCTTGTGAAGTTGAAAAGATCAGTAGAAGACTGAGCATTCTTGAAGAAGGTACAAGAACTATGAAGAAAGATTTGTTTAACA
GTTTGGAGGAAAGAAGAAATCTTGTGTATGAGATAAACCAGCAATTTCAGATCATAAACAAAGGCCATACGTTCTCTAATGAGGTAGCGGCTGCTTTGATGGCTTATCTT
GAAGATGATGATGAGACACTCCATCCCCCTAAGGAATGGAAACGTGGTGTTGGCCTATCAGAAATCTTTGACCACCAACCAAATATATCTCTCGTCTTCAAACATTTCAA
AGCAAATTCGTTGGCATGGACAGATTCTACCAAATCTTTGCATCTTATAAGAGAAAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGAAGACCAAAAACGCTGTCATGGTCATGGAACTGAAGCAGATGGTTCAAGTCATGAGATGATTTTAAGAGCATTTGATCGAAATGGGGTTGCAAAAAACTCGTG
GAAAGATGGCAACAGTTCGAGAGTGAAAGCTTGTGAAGTTGAAAAGATCAGTAGAAGACTGAGCATTCTTGAAGAAGGTACAAGAACTATGAAGAAAGATTTGTTTAACA
GTTTGGAGGAAAGAAGAAATCTTGTGTATGAGATAAACCAGCAATTTCAGATCATAAACAAAGGCCATACGTTCTCTAATGAGGTAGCGGCTGCTTTGATGGCTTATCTT
GAAGATGATGATGAGACACTCCATCCCCCTAAGGAATGGAAACGTGGTGTTGGCCTATCAGAAATCTTTGACCACCAACCAAATATATCTCTCGTCTTCAAACATTTCAA
AGCAAATTCGTTGGCATGGACAGATTCTACCAAATCTTTGCATCTTATAAGAGAAAAATGA
Protein sequenceShow/hide protein sequence
MAEDQKRCHGHGTEADGSSHEMILRAFDRNGVAKNSWKDGNSSRVKACEVEKISRRLSILEEGTRTMKKDLFNSLEERRNLVYEINQQFQIINKGHTFSNEVAAALMAYL
EDDDETLHPPKEWKRGVGLSEIFDHQPNISLVFKHFKANSLAWTDSTKSLHLIREK