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Lsi07G004310 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G004310
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr07:4604058..4608600
RNA-Seq ExpressionLsi07G004310
SyntenyLsi07G004310
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5758116.1 hypothetical protein HanXRQr2_Chr16g0725631 [Helianthus annuus]2.0e-1057.75Show/hide
Query:  TSAPNPLDASYATRFLSVACVFTSSLAVGRYSIPVLALKVIVEIPPWEGEKRIPALKSSETEGIVISSVNG
        T+ P    ASYATRFL    VFTSS   GRY++ VL  K++ +IPP  GEKRIPAL  S T+GIVISS+ G
Subjt:  TSAPNPLDASYATRFLSVACVFTSSLAVGRYSIPVLALKVIVEIPPWEGEKRIPALKSSETEGIVISSVNG
XP_020223072.1 uncharacterized protein LOC109805420 [Cajanus cajan]1.7e-0635.65Show/hide
Query:  NQATAIKASKGQELWFTITPPSLSNLKSSLESTIPFINSVYLVKTSAPNPLDASYATRFLSVACVFTSSLAVGRYSIPVLALKVIVEIPPWEGEKRIPAL
        N AT++   +    WF+ TP SL    SS  S +PFI+SVY  +      + ASYATRF     + + +   GR+S+      +   +PP  G    P  
Subjt:  NQATAIKASKGQELWFTITPPSLSNLKSSLESTIPFINSVYLVKTSAPNPLDASYATRFLSVACVFTSSLAVGRYSIPVLALKVIVEIPPWEGEKRIPAL

Query:  KSSETEGIVISSVNG
        +SS T GI  SS NG
Subjt:  KSSETEGIVISSVNG
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGGCGCGAAAGCAACCAAACAGAGAGCAAAAAGCTTGGAGAGCGATCAAGAACAGAAACCAAGCGACCGCCATTAAAGCAAGCAAAGGCCAAGAACTATGGTTCAC
AATCACCCCTCCTTCTCTTAGCAATCTCAAATCCTCGTTGGAATCCACGATTCCGTTCATCAATTCCGTGTATCTTGTGAAAACCAGCGCCCCTAATCCGCTTGACGCTT
CGTATGCTACGAGGTTTCTCAGCGTTGCTTGTGTGTTCACGTCGAGTCTCGCCGTTGGAAGGTACAGCATTCCGGTTTTGGCGTTGAAGGTGATTGTAGAGATTCCGCCA
TGGGAGGGTGAGAAGCGGATTCCGGCTTTGAAGAGCTCCGAAACGGAAGGTATTGTTATTTCCTCTGTTAATGGCGGTCTATTTGCGTTTGGATTTGAATTAGGAATAGA
ATCTGTTTTAACACTGCGAATGGAGGGATCGTGGAGAGAATCGTCCATGGCAGCCGCGCGATCGTCTTCACATGTTGAGATTGCATCGCTCGCTTTAGGATTCGAATTGG
AATTCCATCATCTTCCTCAATACGAACAATGGAATTTGATTTTCGAGCATGATTATATCTCTGAGAACAGCGTTATGTGCCGGCTTCGTCCCGGCGTAATCCATCAAATG
CGACATTCTAGAAGAAACTCGCCGGAGACTCTTCAATTCTCCCGCGTAGACATGGAGAAACTCAAGCAAGAAAGAGGCATCAACGGCCATCATCCAGGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGGGCGCGAAAGCAACCAAACAGAGAGCAAAAAGCTTGGAGAGCGATCAAGAACAGAAACCAAGCGACCGCCATTAAAGCAAGCAAAGGCCAAGAACTATGGTTCAC
AATCACCCCTCCTTCTCTTAGCAATCTCAAATCCTCGTTGGAATCCACGATTCCGTTCATCAATTCCGTGTATCTTGTGAAAACCAGCGCCCCTAATCCGCTTGACGCTT
CGTATGCTACGAGGTTTCTCAGCGTTGCTTGTGTGTTCACGTCGAGTCTCGCCGTTGGAAGGTACAGCATTCCGGTTTTGGCGTTGAAGGTGATTGTAGAGATTCCGCCA
TGGGAGGGTGAGAAGCGGATTCCGGCTTTGAAGAGCTCCGAAACGGAAGGTATTGTTATTTCCTCTGTTAATGGCGGTCTATTTGCGTTTGGATTTGAATTAGGAATAGA
ATCTGTTTTAACACTGCGAATGGAGGGATCGTGGAGAGAATCGTCCATGGCAGCCGCGCGATCGTCTTCACATGTTGAGATTGCATCGCTCGCTTTAGGATTCGAATTGG
AATTCCATCATCTTCCTCAATACGAACAATGGAATTTGATTTTCGAGCATGATTATATCTCTGAGAACAGCGTTATGTGCCGGCTTCGTCCCGGCGTAATCCATCAAATG
CGACATTCTAGAAGAAACTCGCCGGAGACTCTTCAATTCTCCCGCGTAGACATGGAGAAACTCAAGCAAGAAAGAGGCATCAACGGCCATCATCCAGGCTAA
Protein sequenceShow/hide protein sequence
MRARKQPNREQKAWRAIKNRNQATAIKASKGQELWFTITPPSLSNLKSSLESTIPFINSVYLVKTSAPNPLDASYATRFLSVACVFTSSLAVGRYSIPVLALKVIVEIPP
WEGEKRIPALKSSETEGIVISSVNGGLFAFGFELGIESVLTLRMEGSWRESSMAAARSSSHVEIASLALGFELEFHHLPQYEQWNLIFEHDYISENSVMCRLRPGVIHQM
RHSRRNSPETLQFSRVDMEKLKQERGINGHHPG