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Lsi07G004460 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G004460
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionpalmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like
Genome locationchr07:4762383..4762850
RNA-Seq ExpressionLsi07G004460
SyntenyLsi07G004460
Gene Ontology termsGO:0006633 - fatty acid biosynthetic process (biological process)
GO:0005789 - endoplasmic reticulum membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0009979 - 16:0 monogalactosyldiacylglycerol desaturase activity (molecular function)
GO:0016717 - oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water (molecular function)
InterPro domainsIPR015876 - Acyl-CoA desaturase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008454221.1 PREDICTED: palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like [Cucumis melo]5.8e-2686.15Show/hide
Query:  LVSLLAFGEGWHNNHHAFQYSARFGLEWWQIDFGWFAIRFLQAIGVATNVKSPSPIHKQRLVIDY
        LVSLLAFGEGWHNNHHAF+YSARFGLEWWQIDFGW+ IR LQAIG+A NVK PS IHKQRL IDY
Subjt:  LVSLLAFGEGWHNNHHAFQYSARFGLEWWQIDFGWFAIRFLQAIGVATNVKSPSPIHKQRLVIDY

XP_011652980.1 palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic [Cucumis sativus]1.7e-2584.62Show/hide
Query:  LVSLLAFGEGWHNNHHAFQYSARFGLEWWQIDFGWFAIRFLQAIGVATNVKSPSPIHKQRLVIDY
        LV LLAFGEGWHNNHHAF+YSARFGL+WWQIDFGW+ IR LQAIGVA NVK PS IHKQRL IDY
Subjt:  LVSLLAFGEGWHNNHHAFQYSARFGLEWWQIDFGWFAIRFLQAIGVATNVKSPSPIHKQRLVIDY

XP_022158246.1 palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like [Momordica charantia]4.6e-2385Show/hide
Query:  VSLLAFGEGWHNNHHAFQYSARFGLEWWQIDFGWFAIRFLQAIGVATNVKSPSPIHKQRL
        V LL FGEGWHNNHHAF+YSARFGLEWWQIDFGW+ IR LQAIGVATNVK PS  HKQRL
Subjt:  VSLLAFGEGWHNNHHAFQYSARFGLEWWQIDFGWFAIRFLQAIGVATNVKSPSPIHKQRL

XP_022980838.1 palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like [Cucurbita maxima]4.1e-2484.13Show/hide
Query:  LVSLLAFGEGWHNNHHAFQYSARFGLEWWQIDFGWFAIRFLQAIGVATNVKSPSPIHKQRLVI
        LV LLAFGEGWHNNHHAF+YSARFG+EWW+ D GW+ IRFLQAIGVAT+VKSPS IHKQRLVI
Subjt:  LVSLLAFGEGWHNNHHAFQYSARFGLEWWQIDFGWFAIRFLQAIGVATNVKSPSPIHKQRLVI

XP_023526679.1 palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo]1.0e-2280.65Show/hide
Query:  LVSLLAFGEGWHNNHHAFQYSARFGLEWWQIDFGWFAIRFLQAIGVATNVKSPSPIHKQRLV
        LV LLAFGEGWHNNHHAF+YSARFG+EWW+ D GW+ IRFLQAIGVAT VK PS IHKQRL+
Subjt:  LVSLLAFGEGWHNNHHAFQYSARFGLEWWQIDFGWFAIRFLQAIGVATNVKSPSPIHKQRLV

TrEMBL top hitse value%identityAlignment
A0A0A0KYH4 FA_desaturase domain-containing protein8.2e-2684.62Show/hide
Query:  LVSLLAFGEGWHNNHHAFQYSARFGLEWWQIDFGWFAIRFLQAIGVATNVKSPSPIHKQRLVIDY
        LV LLAFGEGWHNNHHAF+YSARFGL+WWQIDFGW+ IR LQAIGVA NVK PS IHKQRL IDY
Subjt:  LVSLLAFGEGWHNNHHAFQYSARFGLEWWQIDFGWFAIRFLQAIGVATNVKSPSPIHKQRLVIDY

A0A1S3BYW2 palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like2.8e-2686.15Show/hide
Query:  LVSLLAFGEGWHNNHHAFQYSARFGLEWWQIDFGWFAIRFLQAIGVATNVKSPSPIHKQRLVIDY
        LVSLLAFGEGWHNNHHAF+YSARFGLEWWQIDFGW+ IR LQAIG+A NVK PS IHKQRL IDY
Subjt:  LVSLLAFGEGWHNNHHAFQYSARFGLEWWQIDFGWFAIRFLQAIGVATNVKSPSPIHKQRLVIDY

A0A6J1E0E4 palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like2.2e-2385Show/hide
Query:  VSLLAFGEGWHNNHHAFQYSARFGLEWWQIDFGWFAIRFLQAIGVATNVKSPSPIHKQRL
        V LL FGEGWHNNHHAF+YSARFGLEWWQIDFGW+ IR LQAIGVATNVK PS  HKQRL
Subjt:  VSLLAFGEGWHNNHHAFQYSARFGLEWWQIDFGWFAIRFLQAIGVATNVKSPSPIHKQRL

A0A6J1GWI3 palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like5.5e-2279.03Show/hide
Query:  LVSLLAFGEGWHNNHHAFQYSARFGLEWWQIDFGWFAIRFLQAIGVATNVKSPSPIHKQRLV
        LV LLAFGEGWHNNHHAF+YSAR G+EWWQ D GW+ I FLQAIGVAT+VK PS IHKQRL+
Subjt:  LVSLLAFGEGWHNNHHAFQYSARFGLEWWQIDFGWFAIRFLQAIGVATNVKSPSPIHKQRLV

A0A6J1J0F3 palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like2.0e-2484.13Show/hide
Query:  LVSLLAFGEGWHNNHHAFQYSARFGLEWWQIDFGWFAIRFLQAIGVATNVKSPSPIHKQRLVI
        LV LLAFGEGWHNNHHAF+YSARFG+EWW+ D GW+ IRFLQAIGVAT+VKSPS IHKQRLVI
Subjt:  LVSLLAFGEGWHNNHHAFQYSARFGLEWWQIDFGWFAIRFLQAIGVATNVKSPSPIHKQRLVI

SwissProt top hitse value%identityAlignment
P0DOW2 Acyl-CoA C20 Delta5-desaturase9.3e-1958.33Show/hide
Query:  VSLLAFGEGWHNNHHAFQYSARFGLEWWQIDFGWFAIRFLQAIGVATNVKSPSPIHKQRL
        +++L  GEGWHNNHHAF+YSAR G+EWWQID  W+ I+ L+ +G+AT++K PS IHK+++
Subjt:  VSLLAFGEGWHNNHHAFQYSARFGLEWWQIDFGWFAIRFLQAIGVATNVKSPSPIHKQRL

P0DOW3 Acyl-CoA 5-desaturase AL217.1e-1958.33Show/hide
Query:  VSLLAFGEGWHNNHHAFQYSARFGLEWWQIDFGWFAIRFLQAIGVATNVKSPSPIHKQRL
        +++L  GEGWHNNHHAF+YSAR G+EWWQID  W+ I+ L+ +G+AT+VK PS +HK+++
Subjt:  VSLLAFGEGWHNNHHAFQYSARFGLEWWQIDFGWFAIRFLQAIGVATNVKSPSPIHKQRL

Q949X0 Palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic4.5e-2168.33Show/hide
Query:  VSLLAFGEGWHNNHHAFQYSARFGLEWWQIDFGWFAIRFLQAIGVATNVKSPSPIHKQRL
        V+ LAFGEGWHNNHHAF++SAR GLEWWQ+D  W+ ++FLQAIG+AT+VK PS   KQR+
Subjt:  VSLLAFGEGWHNNHHAFQYSARFGLEWWQIDFGWFAIRFLQAIGVATNVKSPSPIHKQRL

Q9FV68 Icosanoyl-CoA 5-desaturase (Fragment)2.9e-2067.74Show/hide
Query:  LLVSLLAFGEGWHNNHHAFQYSARFGLEWWQIDFGWFAIRFLQAIGVATNVKSPSPIHKQRL
        + V+L AFGEGWHNNHHAF+ SAR GLEWW+ID  W+ IR LQAIG+ATNVK P+   KQ+L
Subjt:  LLVSLLAFGEGWHNNHHAFQYSARFGLEWWQIDFGWFAIRFLQAIGVATNVKSPSPIHKQRL

Q9LVZ3 Probable lipid desaturase ADS3.2, chloroplastic4.6e-1869.81Show/hide
Query:  VSLLAFGEGWHNNHHAFQYSARFGLEWWQIDFGWFAIRFLQAIGVATNVKSPS
        V++L  GEGWHNNHHAF++SAR GLEWWQ+D  W  IRFL+AIG+ATNVK P+
Subjt:  VSLLAFGEGWHNNHHAFQYSARFGLEWWQIDFGWFAIRFLQAIGVATNVKSPS

Arabidopsis top hitse value%identityAlignment
AT1G06080.1 delta 9 desaturase 14.3e-1958.06Show/hide
Query:  VSLLAFGEGWHNNHHAFQYSARFGLEWWQIDFGWFAIRFLQAIGVATNVKSPSPIHKQRLVI
        +S+ +FGE WHNNHHAF+ SAR GLEWWQID  W+ +RFL+ IG+AT+VK PS   ++R+ +
Subjt:  VSLLAFGEGWHNNHHAFQYSARFGLEWWQIDFGWFAIRFLQAIGVATNVKSPSPIHKQRLVI

AT1G06360.1 Fatty acid desaturase family protein9.5e-1959.68Show/hide
Query:  VSLLAFGEGWHNNHHAFQYSARFGLEWWQIDFGWFAIRFLQAIGVATNVKSPSPIHKQRLVI
        +SL   GE WHNNHHAF+ SAR GLEWWQID  W+ IR  + +G+AT+VK PS I KQ+L +
Subjt:  VSLLAFGEGWHNNHHAFQYSARFGLEWWQIDFGWFAIRFLQAIGVATNVKSPSPIHKQRLVI

AT2G31360.1 16:0delta9 desaturase 29.5e-1956.45Show/hide
Query:  VSLLAFGEGWHNNHHAFQYSARFGLEWWQIDFGWFAIRFLQAIGVATNVKSPSPIHKQRLVI
        +S+ +FGE WHNNHHAF+ SAR GLEWWQID  W+ +RF + IG+AT+VK P+   ++R+ I
Subjt:  VSLLAFGEGWHNNHHAFQYSARFGLEWWQIDFGWFAIRFLQAIGVATNVKSPSPIHKQRLVI

AT3G15850.1 fatty acid desaturase 53.2e-2268.33Show/hide
Query:  VSLLAFGEGWHNNHHAFQYSARFGLEWWQIDFGWFAIRFLQAIGVATNVKSPSPIHKQRL
        V+ LAFGEGWHNNHHAF++SAR GLEWWQ+D  W+ ++FLQAIG+AT+VK PS   KQR+
Subjt:  VSLLAFGEGWHNNHHAFQYSARFGLEWWQIDFGWFAIRFLQAIGVATNVKSPSPIHKQRL

AT3G15870.1 Fatty acid desaturase family protein3.3e-1969.81Show/hide
Query:  VSLLAFGEGWHNNHHAFQYSARFGLEWWQIDFGWFAIRFLQAIGVATNVKSPS
        V++L  GEGWHNNHHAF++SAR GLEWWQ+D  W  IRFL+AIG+ATNVK P+
Subjt:  VSLLAFGEGWHNNHHAFQYSARFGLEWWQIDFGWFAIRFLQAIGVATNVKSPS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTTTGTTGGTAAGTTTGCTTGCATTTGGAGAAGGTTGGCACAACAACCATCACGCTTTTCAATATTCAGCAAGGTTTGGACTTGAATGGTGGCAAATTGACTTTGG
TTGGTTTGCTATTAGGTTTCTTCAAGCCATTGGAGTTGCCACAAATGTAAAATCACCCTCTCCAATTCACAAGCAAAGGCTTGTTATAGACTATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGTTTGTTGGTAAGTTTGCTTGCATTTGGAGAAGGTTGGCACAACAACCATCACGCTTTTCAATATTCAGCAAGGTTTGGACTTGAATGGTGGCAAATTGACTTTGG
TTGGTTTGCTATTAGGTTTCTTCAAGCCATTGGAGTTGCCACAAATGTAAAATCACCCTCTCCAATTCACAAGCAAAGGCTTGTTATAGACTATTGAGTCTTAATGAAAT
TATTTATGTTTGGTAGTTGCAAGAGGGTAAATAAGGGTATAATTAGTTAATTAATTACGTTAGATTTTAAAGGACGGTATAAGCCCTAAGCCGTATTGATTATATAAAAG
CTACTATTGATCTTTATTTTTGAAGTTTTAGAAGCTTCTCATAAATAATTGTCTATCGATATTATTTTGGATAATGTTTCTTAATCTGTAGATATTTTTAT
Protein sequenceShow/hide protein sequence
MCLLVSLLAFGEGWHNNHHAFQYSARFGLEWWQIDFGWFAIRFLQAIGVATNVKSPSPIHKQRLVIDY