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Lsi07G004590 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G004590
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionNucleolar GTPase
Genome locationchr07:4891163..4893158
RNA-Seq ExpressionLsi07G004590
SyntenyLsi07G004590
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139183.2 uncharacterized protein LOC101210593 isoform X3 [Cucumis sativus]2.7e-5373.79Show/hide
Query:  GKRYVCALGEIYRVVQVLRASVVLYKPWILLGRVDPSDLISLLNECSDIWLSSGLVGALCKIDGPIDCKALLDSINVIQNLDEW----------------
        GK+Y+CALGEIYRV QVLRAS VLYKPW+LLG+VDPS LISL+NECS+IWLSSGLVGALCKIDGPIDCKALLDSIN I NLDEW                
Subjt:  GKRYVCALGEIYRVVQVLRASVVLYKPWILLGRVDPSDLISLLNECSDIWLSSGLVGALCKIDGPIDCKALLDSINVIQNLDEW----------------

Query:  ---------GMDLVVWNGENYFLKLANLWANLIGRDPPFIQHSNN
                 GMDLVVWNGENYFLKLANLWANLIGRDPP IQHS+N
Subjt:  ---------GMDLVVWNGENYFLKLANLWANLIGRDPPFIQHSNN

XP_011648807.1 uncharacterized protein LOC101210593 isoform X1 [Cucumis sativus]2.7e-5373.79Show/hide
Query:  GKRYVCALGEIYRVVQVLRASVVLYKPWILLGRVDPSDLISLLNECSDIWLSSGLVGALCKIDGPIDCKALLDSINVIQNLDEW----------------
        GK+Y+CALGEIYRV QVLRAS VLYKPW+LLG+VDPS LISL+NECS+IWLSSGLVGALCKIDGPIDCKALLDSIN I NLDEW                
Subjt:  GKRYVCALGEIYRVVQVLRASVVLYKPWILLGRVDPSDLISLLNECSDIWLSSGLVGALCKIDGPIDCKALLDSINVIQNLDEW----------------

Query:  ---------GMDLVVWNGENYFLKLANLWANLIGRDPPFIQHSNN
                 GMDLVVWNGENYFLKLANLWANLIGRDPP IQHS+N
Subjt:  ---------GMDLVVWNGENYFLKLANLWANLIGRDPPFIQHSNN

XP_011648808.1 uncharacterized protein LOC101210593 isoform X2 [Cucumis sativus]2.7e-5373.79Show/hide
Query:  GKRYVCALGEIYRVVQVLRASVVLYKPWILLGRVDPSDLISLLNECSDIWLSSGLVGALCKIDGPIDCKALLDSINVIQNLDEW----------------
        GK+Y+CALGEIYRV QVLRAS VLYKPW+LLG+VDPS LISL+NECS+IWLSSGLVGALCKIDGPIDCKALLDSIN I NLDEW                
Subjt:  GKRYVCALGEIYRVVQVLRASVVLYKPWILLGRVDPSDLISLLNECSDIWLSSGLVGALCKIDGPIDCKALLDSINVIQNLDEW----------------

Query:  ---------GMDLVVWNGENYFLKLANLWANLIGRDPPFIQHSNN
                 GMDLVVWNGENYFLKLANLWANLIGRDPP IQHS+N
Subjt:  ---------GMDLVVWNGENYFLKLANLWANLIGRDPPFIQHSNN

XP_038887011.1 uncharacterized protein LOC120077179 isoform X1 [Benincasa hispida]2.2e-5577.93Show/hide
Query:  GKRYVCALGEIYRVVQVLRASVVLYKPWILLGRVDPSDLISLLNECSDIWLSSGLVGALCKIDGPIDCKALLDSINVIQNLDEW----------------
        GK+Y+CALGEIYRVVQVLRASVVLYKPWILLG+V PS LISLLNECS IWLSSGL GALCKIDGPIDCKALLDSINVIQNLDEW                
Subjt:  GKRYVCALGEIYRVVQVLRASVVLYKPWILLGRVDPSDLISLLNECSDIWLSSGLVGALCKIDGPIDCKALLDSINVIQNLDEW----------------

Query:  ---------GMDLVVWNGENYFLKLANLWANLIGRDPPFIQHSNN
                 GMDLVVWNGENYFLKLANLWANLIGRDPPFIQHSNN
Subjt:  ---------GMDLVVWNGENYFLKLANLWANLIGRDPPFIQHSNN

XP_038887012.1 uncharacterized protein LOC120077179 isoform X2 [Benincasa hispida]2.2e-5577.93Show/hide
Query:  GKRYVCALGEIYRVVQVLRASVVLYKPWILLGRVDPSDLISLLNECSDIWLSSGLVGALCKIDGPIDCKALLDSINVIQNLDEW----------------
        GK+Y+CALGEIYRVVQVLRASVVLYKPWILLG+V PS LISLLNECS IWLSSGL GALCKIDGPIDCKALLDSINVIQNLDEW                
Subjt:  GKRYVCALGEIYRVVQVLRASVVLYKPWILLGRVDPSDLISLLNECSDIWLSSGLVGALCKIDGPIDCKALLDSINVIQNLDEW----------------

Query:  ---------GMDLVVWNGENYFLKLANLWANLIGRDPPFIQHSNN
                 GMDLVVWNGENYFLKLANLWANLIGRDPPFIQHSNN
Subjt:  ---------GMDLVVWNGENYFLKLANLWANLIGRDPPFIQHSNN

TrEMBL top hitse value%identityAlignment
A0A0A0LJK9 Uncharacterized protein1.3e-5373.79Show/hide
Query:  GKRYVCALGEIYRVVQVLRASVVLYKPWILLGRVDPSDLISLLNECSDIWLSSGLVGALCKIDGPIDCKALLDSINVIQNLDEW----------------
        GK+Y+CALGEIYRV QVLRAS VLYKPW+LLG+VDPS LISL+NECS+IWLSSGLVGALCKIDGPIDCKALLDSIN I NLDEW                
Subjt:  GKRYVCALGEIYRVVQVLRASVVLYKPWILLGRVDPSDLISLLNECSDIWLSSGLVGALCKIDGPIDCKALLDSINVIQNLDEW----------------

Query:  ---------GMDLVVWNGENYFLKLANLWANLIGRDPPFIQHSNN
                 GMDLVVWNGENYFLKLANLWANLIGRDPP IQHS+N
Subjt:  ---------GMDLVVWNGENYFLKLANLWANLIGRDPPFIQHSNN

A0A1S3C046 uncharacterized protein LOC103495090 isoform X16.1e-5172.41Show/hide
Query:  GKRYVCALGEIYRVVQVLRASVVLYKPWILLGRVDPSDLISLLNECSDIWLSSGLVGALCKIDGPIDCKALLDSINVIQNLDEW----------------
        GK+Y+CALGEIYRVVQVLRAS VLYKPWILLG+VDP++LISL NECS+IWLSSGLV ALCKIDGPIDCKALLDSIN I NLDEW                
Subjt:  GKRYVCALGEIYRVVQVLRASVVLYKPWILLGRVDPSDLISLLNECSDIWLSSGLVGALCKIDGPIDCKALLDSINVIQNLDEW----------------

Query:  ---------GMDLVVWNGENYFLKLANLWANLIGRDPPFIQHSNN
                 GMDLVVWNGENYFLKLANLWANLIGRDPP IQ+  N
Subjt:  ---------GMDLVVWNGENYFLKLANLWANLIGRDPPFIQHSNN

A0A6J1G4X0 uncharacterized protein LOC1114507293.2e-5272.79Show/hide
Query:  LSGKRYVCALGEIYRVVQVLRASVVLYKPWILLGRVDPSDLISLLNECSDIWLSSGLVGALCKIDGPIDCKALLDSINVIQNLDEW--------------
        L GKRY+CALGEIYRVVQVLRASV LYKPWILLG+VDPS LISLLNECS+IW SSGLV ALCK DGPIDCKALLDSIN IQNLDEW              
Subjt:  LSGKRYVCALGEIYRVVQVLRASVVLYKPWILLGRVDPSDLISLLNECSDIWLSSGLVGALCKIDGPIDCKALLDSINVIQNLDEW--------------

Query:  -----------GMDLVVWNGENYFLKLANLWANLIGRDPPFIQHSNN
                   G+DLVVW+GE+YFLKLANLWANLI RDPPFIQH NN
Subjt:  -----------GMDLVVWNGENYFLKLANLWANLIGRDPPFIQHSNN

A0A6J1KC64 uncharacterized protein LOC1114935911.2e-5173.1Show/hide
Query:  GKRYVCALGEIYRVVQVLRASVVLYKPWILLGRVDPSDLISLLNECSDIWLSSGLVGALCKIDGPIDCKALLDSINVIQNLDEW----------------
        GKRY+CALGEIYRVVQVLRASV LYKPWILLG+VDPS LISLLNECS+IW SSGLV ALCKIDGPIDCKALLDSIN IQNLDEW                
Subjt:  GKRYVCALGEIYRVVQVLRASVVLYKPWILLGRVDPSDLISLLNECSDIWLSSGLVGALCKIDGPIDCKALLDSINVIQNLDEW----------------

Query:  ---------GMDLVVWNGENYFLKLANLWANLIGRDPPFIQHSNN
                 G+ LVVW+GE+YFLKLANLWANLI RDPPFIQH NN
Subjt:  ---------GMDLVVWNGENYFLKLANLWANLIGRDPPFIQHSNN

A6YTC8 Nucleolar GTPase6.1e-5172.41Show/hide
Query:  GKRYVCALGEIYRVVQVLRASVVLYKPWILLGRVDPSDLISLLNECSDIWLSSGLVGALCKIDGPIDCKALLDSINVIQNLDEW----------------
        GK+Y+CALGEIYRVVQVLRAS VLYKPWILLG+VDP++LISL NECS+IWLSSGLV ALCKIDGPIDCKALLDSIN I NLDEW                
Subjt:  GKRYVCALGEIYRVVQVLRASVVLYKPWILLGRVDPSDLISLLNECSDIWLSSGLVGALCKIDGPIDCKALLDSINVIQNLDEW----------------

Query:  ---------GMDLVVWNGENYFLKLANLWANLIGRDPPFIQHSNN
                 GMDLVVWNGENYFLKLANLWANLIGRDPP IQ+  N
Subjt:  ---------GMDLVVWNGENYFLKLANLWANLIGRDPPFIQHSNN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G54920.2 unknown protein1.4e-2344.2Show/hide
Query:  GKRYVCALGEIYRVVQVLRASVVLYKPWILLGRVDPSDLISLLNECSDIWLSSGLVGALCKIDGPIDCKALLDSINVIQNLDEW----------------
        GK Y  ++GEIYRVV++LRAS  LYKPWILL     S+++++L+EC  +WLSSGLV AL           LL+SI  I  +D +                
Subjt:  GKRYVCALGEIYRVVQVLRASVVLYKPWILLGRVDPSDLISLLNECSDIWLSSGLVGALCKIDGPIDCKALLDSINVIQNLDEW----------------

Query:  ---------GMDLVVWNGENYFLKLANLWANLIGRDPP
                 G+  V WNGE+Y L LAN+WANLI RDPP
Subjt:  ---------GMDLVVWNGENYFLKLANLWANLIGRDPP

AT1G54920.3 unknown protein1.4e-2344.2Show/hide
Query:  GKRYVCALGEIYRVVQVLRASVVLYKPWILLGRVDPSDLISLLNECSDIWLSSGLVGALCKIDGPIDCKALLDSINVIQNLDEW----------------
        GK Y  ++GEIYRVV++LRAS  LYKPWILL     S+++++L+EC  +WLSSGLV AL           LL+SI  I  +D +                
Subjt:  GKRYVCALGEIYRVVQVLRASVVLYKPWILLGRVDPSDLISLLNECSDIWLSSGLVGALCKIDGPIDCKALLDSINVIQNLDEW----------------

Query:  ---------GMDLVVWNGENYFLKLANLWANLIGRDPP
                 G+  V WNGE+Y L LAN+WANLI RDPP
Subjt:  ---------GMDLVVWNGENYFLKLANLWANLIGRDPP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGCCATTCTTTCAGGAAAACGATATGTCTGCGCCCTCGGAGAGATTTATAGGGTAGTTCAAGTGCTTAGAGCCTCAGTTGTACTTTACAAGCCATGGATACTGTT
AGGTCGGGTTGATCCCAGTGACTTGATTTCTCTTCTGAATGAGTGCTCCGATATTTGGTTGAGTTCAGGACTCGTTGGAGCTCTCTGCAAGATAGATGGTCCTATTGATT
GCAAAGCATTATTGGATTCTATCAATGTTATTCAGAATCTTGATGAATGGGGTATGGATTTGGTGGTCTGGAATGGGGAGAACTACTTTTTAAAGCTCGCAAACTTATGG
GCAAATCTAATAGGTCGTGATCCTCCATTCATTCAGCACTCGAATAAT
mRNA sequenceShow/hide mRNA sequence
ATGTCTGCCATTCTTTCAGGAAAACGATATGTCTGCGCCCTCGGAGAGATTTATAGGGTAGTTCAAGTGCTTAGAGCCTCAGTTGTACTTTACAAGCCATGGATACTGTT
AGGTCGGGTTGATCCCAGTGACTTGATTTCTCTTCTGAATGAGTGCTCCGATATTTGGTTGAGTTCAGGACTCGTTGGAGCTCTCTGCAAGATAGATGGTCCTATTGATT
GCAAAGCATTATTGGATTCTATCAATGTTATTCAGAATCTTGATGAATGGGGTATGGATTTGGTGGTCTGGAATGGGGAGAACTACTTTTTAAAGCTCGCAAACTTATGG
GCAAATCTAATAGGTCGTGATCCTCCATTCATTCAGCACTCGAATAAT
Protein sequenceShow/hide protein sequence
MSAILSGKRYVCALGEIYRVVQVLRASVVLYKPWILLGRVDPSDLISLLNECSDIWLSSGLVGALCKIDGPIDCKALLDSINVIQNLDEWGMDLVVWNGENYFLKLANLW
ANLIGRDPPFIQHSNN