CuGenDBv2

Gene ID	Lsi07G004680
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	DCC family protein At1g52590, chloroplastic
Genome location	chr07:4957965..4959829
RNA-Seq Expression	Lsi07G004680
Synteny	Lsi07G004680
Gene Ontology terms	GO:0015035 - protein disulfide oxidoreductase activity (molecular function)
InterPro domains	IPR007263 - DCC1-like thiol-disulfide oxidoreductase family

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004152205.1 DCC family protein At1g52590, chloroplastic [Cucumis sativus]

4.3e-76

83.15

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Query:  MALPLPGGIPARFVPPSTAKARLPHPTTSASLSPITKDETIDWVEATFDFFEKDTRPIMLFDGVCNLCNGGVRFVRANDRNRRIRFEALQSEAGTRLLRR
        MALPL G  PA F+PPS  KA L HP  SASLSP  KDETIDWVEAT +FFEKDTRPIMLFDGVCNLCNGGVRFVRANDRNRRIR EALQS+AG +LLRR
Subjt:  MALPLPGGIPARFVPPSTAKARLPHPTTSASLSPITKDETIDWVEATFDFFEKDTRPIMLFDGVCNLCNGGVRFVRANDRNRRIRFEALQSEAGTRLLRR

Query:  SGRAPDDLSSVVIVEKDRYMHAAPRLKSYIKSEAVLRIMEHLELPFPQLALFLQFVPLFVRNIVYDNIADNRYTLFGRSESCEI
        SGRAPDD+SSVV+VEKDR         SYIKSEAVLRIME+LELPFPQLALFLQFVPLFVRNIVYDNIADNRYTLFGRSESCEI
Subjt:  SGRAPDDLSSVVIVEKDRYMHAAPRLKSYIKSEAVLRIMEHLELPFPQLALFLQFVPLFVRNIVYDNIADNRYTLFGRSESCEI

XP_008454244.1 PREDICTED: DCC family protein At1g52590, chloroplastic [Cucumis melo]

3.3e-76

83.78

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Query:  MALPLPGGIPARFVPPSTAKA-RLPHPTTSASLSPITKDETIDWVEATFDFFEKDTRPIMLFDGVCNLCNGGVRFVRANDRNRRIRFEALQSEAGTRLLR
        MALPL G  PA F+PPS  KA  L HP  SASLSPITKDETIDWVEAT DFFEKDTRPIMLFDGVCNLCNGGVRFVRANDRNRRIR EALQS+AG +LLR
Subjt:  MALPLPGGIPARFVPPSTAKA-RLPHPTTSASLSPITKDETIDWVEATFDFFEKDTRPIMLFDGVCNLCNGGVRFVRANDRNRRIRFEALQSEAGTRLLR

Query:  RSGRAPDDLSSVVIVEKDRYMHAAPRLKSYIKSEAVLRIMEHLELPFPQLALFLQFVPLFVRNIVYDNIADNRYTLFGRSESCEI
        RSGRAPDD+SSVV+VEKDR         SYIKSEAVLRIME+LELPFPQLA FLQFVPLFVRNIVYDNIADNRYTLFGRSESCEI
Subjt:  RSGRAPDDLSSVVIVEKDRYMHAAPRLKSYIKSEAVLRIMEHLELPFPQLALFLQFVPLFVRNIVYDNIADNRYTLFGRSESCEI

XP_022153577.1 DCC family protein At1g52590, chloroplastic [Momordica charantia]

3.1e-74

79.35

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Query:  MALPLPGGIPARFVPPSTAKARLPHPTTSASLSPITKDETIDWVEATFDFFEKDTRPIMLFDGVCNLCNGGVRFVRANDRNRRIRFEALQSEAGTRLLRR
        MA+P+PG IPARF+PP  A+AR  H    ASLSP TK ETIDW+EAT DFFEKD+RPIMLFDGVCNLCNGGVRFVRANDRNRRIR EALQSEAG +LLRR
Subjt:  MALPLPGGIPARFVPPSTAKARLPHPTTSASLSPITKDETIDWVEATFDFFEKDTRPIMLFDGVCNLCNGGVRFVRANDRNRRIRFEALQSEAGTRLLRR

Query:  SGRAPDDLSSVVIVEKDRYMHAAPRLKSYIKSEAVLRIMEHLELPFPQLALFLQFVPLFVRNIVYDNIADNRYTLFGRSESCEI
        SGRAPDD+SSVV+VEKDR         SYIKSEAV+RIMEHLELPFPQLA FLQFVPLFVRN VY+N+ADNRY LFGRSESCEI
Subjt:  SGRAPDDLSSVVIVEKDRYMHAAPRLKSYIKSEAVLRIMEHLELPFPQLALFLQFVPLFVRNIVYDNIADNRYTLFGRSESCEI

XP_022980169.1 DCC family protein At1g52590, chloroplastic [Cucurbita maxima]

9.1e-74

81.52

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Query:  MALPLPGGIPARFVPPSTAKARLPHPTTSASLSPITKDETIDWVEATFDFFEKDTRPIMLFDGVCNLCNGGVRFVRANDRNRRIRFEALQSEAGTRLLRR
        MALPL G +PARFV PSTA  R   P    SLS  T D TIDWVEAT DFFEKDTRPIMLFDGVCNLCNGGVRFVRANDRNRRIR EALQSEAG +LLRR
Subjt:  MALPLPGGIPARFVPPSTAKARLPHPTTSASLSPITKDETIDWVEATFDFFEKDTRPIMLFDGVCNLCNGGVRFVRANDRNRRIRFEALQSEAGTRLLRR

Query:  SGRAPDDLSSVVIVEKDRYMHAAPRLKSYIKSEAVLRIMEHLELPFPQLALFLQFVPLFVRNIVYDNIADNRYTLFGRSESCEI
        SGRAPDD+SSVV+VEKDR         SYIKSEAVLRIMEHLELPFPQLALFL+FVPLFVRNI YDNIADNRYTLFGRSESCEI
Subjt:  SGRAPDDLSSVVIVEKDRYMHAAPRLKSYIKSEAVLRIMEHLELPFPQLALFLQFVPLFVRNIVYDNIADNRYTLFGRSESCEI

XP_038900615.1 DCC family protein At1g52590, chloroplastic [Benincasa hispida]

3.4e-81

87.5

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Query:  MALPLPGGIPARFVPPSTAKARLPHPTTSASLSPITKDETIDWVEATFDFFEKDTRPIMLFDGVCNLCNGGVRFVRANDRNRRIRFEALQSEAGTRLLRR
        MALPL GGIPARFVPPS AKAR PH  +SASLSP TKDETIDWVEAT DFFEKDTRPIMLFDGVCNLCNGGVRFVRANDRNRRIR EALQSEAG +LLRR
Subjt:  MALPLPGGIPARFVPPSTAKARLPHPTTSASLSPITKDETIDWVEATFDFFEKDTRPIMLFDGVCNLCNGGVRFVRANDRNRRIRFEALQSEAGTRLLRR

Query:  SGRAPDDLSSVVIVEKDRYMHAAPRLKSYIKSEAVLRIMEHLELPFPQLALFLQFVPLFVRNIVYDNIADNRYTLFGRSESCEI
        SGRAPDD+SSVV+VEKDR         SYIKSEAVLRIME+LELPFPQLALFLQFVPLFVRNIVYDNIADNRYTLFGRSESCEI
Subjt:  SGRAPDDLSSVVIVEKDRYMHAAPRLKSYIKSEAVLRIMEHLELPFPQLALFLQFVPLFVRNIVYDNIADNRYTLFGRSESCEI

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KVF0 Uncharacterized protein

2.1e-76

83.15

Show/hide

Query:  MALPLPGGIPARFVPPSTAKARLPHPTTSASLSPITKDETIDWVEATFDFFEKDTRPIMLFDGVCNLCNGGVRFVRANDRNRRIRFEALQSEAGTRLLRR
        MALPL G  PA F+PPS  KA L HP  SASLSP  KDETIDWVEAT +FFEKDTRPIMLFDGVCNLCNGGVRFVRANDRNRRIR EALQS+AG +LLRR
Subjt:  MALPLPGGIPARFVPPSTAKARLPHPTTSASLSPITKDETIDWVEATFDFFEKDTRPIMLFDGVCNLCNGGVRFVRANDRNRRIRFEALQSEAGTRLLRR

Query:  SGRAPDDLSSVVIVEKDRYMHAAPRLKSYIKSEAVLRIMEHLELPFPQLALFLQFVPLFVRNIVYDNIADNRYTLFGRSESCEI
        SGRAPDD+SSVV+VEKDR         SYIKSEAVLRIME+LELPFPQLALFLQFVPLFVRNIVYDNIADNRYTLFGRSESCEI
Subjt:  SGRAPDDLSSVVIVEKDRYMHAAPRLKSYIKSEAVLRIMEHLELPFPQLALFLQFVPLFVRNIVYDNIADNRYTLFGRSESCEI

A0A1S3BZD9 DCC family protein At1g52590, chloroplastic

1.6e-76

83.78

Show/hide

Query:  MALPLPGGIPARFVPPSTAKA-RLPHPTTSASLSPITKDETIDWVEATFDFFEKDTRPIMLFDGVCNLCNGGVRFVRANDRNRRIRFEALQSEAGTRLLR
        MALPL G  PA F+PPS  KA  L HP  SASLSPITKDETIDWVEAT DFFEKDTRPIMLFDGVCNLCNGGVRFVRANDRNRRIR EALQS+AG +LLR
Subjt:  MALPLPGGIPARFVPPSTAKA-RLPHPTTSASLSPITKDETIDWVEATFDFFEKDTRPIMLFDGVCNLCNGGVRFVRANDRNRRIRFEALQSEAGTRLLR

Query:  RSGRAPDDLSSVVIVEKDRYMHAAPRLKSYIKSEAVLRIMEHLELPFPQLALFLQFVPLFVRNIVYDNIADNRYTLFGRSESCEI
        RSGRAPDD+SSVV+VEKDR         SYIKSEAVLRIME+LELPFPQLA FLQFVPLFVRNIVYDNIADNRYTLFGRSESCEI
Subjt:  RSGRAPDDLSSVVIVEKDRYMHAAPRLKSYIKSEAVLRIMEHLELPFPQLALFLQFVPLFVRNIVYDNIADNRYTLFGRSESCEI

A0A5D3E0H0 DCC family protein

1.6e-76

83.78

Show/hide

Query:  MALPLPGGIPARFVPPSTAKA-RLPHPTTSASLSPITKDETIDWVEATFDFFEKDTRPIMLFDGVCNLCNGGVRFVRANDRNRRIRFEALQSEAGTRLLR
        MALPL G  PA F+PPS  KA  L HP  SASLSPITKDETIDWVEAT DFFEKDTRPIMLFDGVCNLCNGGVRFVRANDRNRRIR EALQS+AG +LLR
Subjt:  MALPLPGGIPARFVPPSTAKA-RLPHPTTSASLSPITKDETIDWVEATFDFFEKDTRPIMLFDGVCNLCNGGVRFVRANDRNRRIRFEALQSEAGTRLLR

Query:  RSGRAPDDLSSVVIVEKDRYMHAAPRLKSYIKSEAVLRIMEHLELPFPQLALFLQFVPLFVRNIVYDNIADNRYTLFGRSESCEI
        RSGRAPDD+SSVV+VEKDR         SYIKSEAVLRIME+LELPFPQLA FLQFVPLFVRNIVYDNIADNRYTLFGRSESCEI
Subjt:  RSGRAPDDLSSVVIVEKDRYMHAAPRLKSYIKSEAVLRIMEHLELPFPQLALFLQFVPLFVRNIVYDNIADNRYTLFGRSESCEI

A0A6J1DJB0 DCC family protein At1g52590, chloroplastic

1.5e-74

79.35

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Query:  MALPLPGGIPARFVPPSTAKARLPHPTTSASLSPITKDETIDWVEATFDFFEKDTRPIMLFDGVCNLCNGGVRFVRANDRNRRIRFEALQSEAGTRLLRR
        MA+P+PG IPARF+PP  A+AR  H    ASLSP TK ETIDW+EAT DFFEKD+RPIMLFDGVCNLCNGGVRFVRANDRNRRIR EALQSEAG +LLRR
Subjt:  MALPLPGGIPARFVPPSTAKARLPHPTTSASLSPITKDETIDWVEATFDFFEKDTRPIMLFDGVCNLCNGGVRFVRANDRNRRIRFEALQSEAGTRLLRR

Query:  SGRAPDDLSSVVIVEKDRYMHAAPRLKSYIKSEAVLRIMEHLELPFPQLALFLQFVPLFVRNIVYDNIADNRYTLFGRSESCEI
        SGRAPDD+SSVV+VEKDR         SYIKSEAV+RIMEHLELPFPQLA FLQFVPLFVRN VY+N+ADNRY LFGRSESCEI
Subjt:  SGRAPDDLSSVVIVEKDRYMHAAPRLKSYIKSEAVLRIMEHLELPFPQLALFLQFVPLFVRNIVYDNIADNRYTLFGRSESCEI

A0A6J1IYJ5 DCC family protein At1g52590, chloroplastic

4.4e-74

81.52

Show/hide

Query:  MALPLPGGIPARFVPPSTAKARLPHPTTSASLSPITKDETIDWVEATFDFFEKDTRPIMLFDGVCNLCNGGVRFVRANDRNRRIRFEALQSEAGTRLLRR
        MALPL G +PARFV PSTA  R   P    SLS  T D TIDWVEAT DFFEKDTRPIMLFDGVCNLCNGGVRFVRANDRNRRIR EALQSEAG +LLRR
Subjt:  MALPLPGGIPARFVPPSTAKARLPHPTTSASLSPITKDETIDWVEATFDFFEKDTRPIMLFDGVCNLCNGGVRFVRANDRNRRIRFEALQSEAGTRLLRR

Query:  SGRAPDDLSSVVIVEKDRYMHAAPRLKSYIKSEAVLRIMEHLELPFPQLALFLQFVPLFVRNIVYDNIADNRYTLFGRSESCEI
        SGRAPDD+SSVV+VEKDR         SYIKSEAVLRIMEHLELPFPQLALFL+FVPLFVRNI YDNIADNRYTLFGRSESCEI
Subjt:  SGRAPDDLSSVVIVEKDRYMHAAPRLKSYIKSEAVLRIMEHLELPFPQLALFLQFVPLFVRNIVYDNIADNRYTLFGRSESCEI

SwissProt top hits

e value

%identity

Alignment

P40761 Uncharacterized protein YuxK

2.5e-18

41.6

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Query:  IMLFDGVCNLCNGGVRFVRANDRNRRIRFEALQSEAGTRLLRRSGRAPDDLSSVVIVEKDRYMHAAPRLKSYIKSEAVLRIMEHLELPFPQLALFLQFVP
        ++LFDGVCNLCNG V+F+   D +  I F +LQSE G  LL++SG   D   S V +E  +          Y KS A +++  HL  P+    LF   VP
Subjt:  IMLFDGVCNLCNGGVRFVRANDRNRRIRFEALQSEAGTRLLRRSGRAPDDLSSVVIVEKDRYMHAAPRLKSYIKSEAVLRIMEHLELPFPQLALFLQFVP

Query:  LFVRNIVYDNIADNRYTLFGRSESC
          VR++VY  IA NRY  FG+   C
Subjt:  LFVRNIVYDNIADNRYTLFGRSESC

Q9SSR1 DCC family protein At1g52590, chloroplastic

1.3e-54

60.87

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Query:  MALPLPGGIPARFVPPSTAKARLPHPTTSASLSPITKDETIDWVEATFDFFEKDTRPIMLFDGVCNLCNGGVRFVRANDRNRRIRFEALQSEAGTRLLRR
        MA+ +P     R    S A+ R+   + SA+   I +D ++DWV+ T  FFE+D RPIMLFDGVCNLCNGGV+FVR +DRNR IRFEALQSEAG +LL R
Subjt:  MALPLPGGIPARFVPPSTAKARLPHPTTSASLSPITKDETIDWVEATFDFFEKDTRPIMLFDGVCNLCNGGVRFVRANDRNRRIRFEALQSEAGTRLLRR

Query:  SGRAPDDLSSVVIVEKDRYMHAAPRLKSYIKSEAVLRIMEHLELPFPQLALFLQFVPLFVRNIVYDNIADNRYTLFGRSESCEI
        SGRAPDD+SSVV+VE DR         SYIKSEAVL+IM++++LPFPQLA FLQF PLFVR+ +Y+N+A+NRY +FGRS+SCE+
Subjt:  SGRAPDDLSSVVIVEKDRYMHAAPRLKSYIKSEAVLRIMEHLELPFPQLALFLQFVPLFVRNIVYDNIADNRYTLFGRSESCEI

Arabidopsis top hits

e value

%identity

Alignment

AT1G24095.1 Putative thiol-disulphide oxidoreductase DCC

2.4e-16

33.14

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Query:  PHPT-TSASLSPITKDETIDWVEATFDFFEKDTR-----------PIMLFDGVCNLCNGGVRFVRANDRNRRIRFEALQSEAGTRLLRRSGRAPDDLSS-
        P P  ++ ++S  T +   D V A  D  E  T+            ++++DGVC+LC+GGV+++   D+ R+I+F  LQS+A    L  SG   +D+   
Subjt:  PHPT-TSASLSPITKDETIDWVEATFDFFEKDTR-----------PIMLFDGVCNLCNGGVRFVRANDRNRRIRFEALQSEAGTRLLRRSGRAPDDLSS-

Query:  VVIVEKDRYMHAAPRLKSYIKSEAVLRIMEHLELPFPQLALFLQFVPLFVRNIVYDNIADNRYTLFGRSESC
         + +E   + H A        S A LR++ +L LP+  L  F   VP  +R+ VYD +A NRY  FG++E C
Subjt:  VVIVEKDRYMHAAPRLKSYIKSEAVLRIMEHLELPFPQLALFLQFVPLFVRNIVYDNIADNRYTLFGRSESC

AT1G52590.1 Putative thiol-disulphide oxidoreductase DCC

9.1e-56

60.87

Show/hide

Query:  MALPLPGGIPARFVPPSTAKARLPHPTTSASLSPITKDETIDWVEATFDFFEKDTRPIMLFDGVCNLCNGGVRFVRANDRNRRIRFEALQSEAGTRLLRR
        MA+ +P     R    S A+ R+   + SA+   I +D ++DWV+ T  FFE+D RPIMLFDGVCNLCNGGV+FVR +DRNR IRFEALQSEAG +LL R
Subjt:  MALPLPGGIPARFVPPSTAKARLPHPTTSASLSPITKDETIDWVEATFDFFEKDTRPIMLFDGVCNLCNGGVRFVRANDRNRRIRFEALQSEAGTRLLRR

Query:  SGRAPDDLSSVVIVEKDRYMHAAPRLKSYIKSEAVLRIMEHLELPFPQLALFLQFVPLFVRNIVYDNIADNRYTLFGRSESCEI
        SGRAPDD+SSVV+VE DR         SYIKSEAVL+IM++++LPFPQLA FLQF PLFVR+ +Y+N+A+NRY +FGRS+SCE+
Subjt:  SGRAPDDLSSVVIVEKDRYMHAAPRLKSYIKSEAVLRIMEHLELPFPQLALFLQFVPLFVRNIVYDNIADNRYTLFGRSESCEI

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGCGCTTCCACTTCCCGGCGGAATTCCGGCACGTTTTGTCCCGCCGTCTACGGCGAAAGCTAGACTACCGCATCCAACTACTTCCGCCTCTTTATCTCCGATAACCAA
AGACGAAACGATAGATTGGGTCGAAGCAACTTTCGACTTCTTCGAGAAAGATACGAGACCGATTATGCTATTTGACGGTGTGTGCAATTTGTGCAATGGAGGTGTAAGAT
TTGTTCGTGCTAATGATCGAAACAGAAGAATACGATTTGAGGCTCTCCAAAGTGAAGCTGGTACGAGGCTGTTAAGAAGGTCAGGAAGAGCACCGGATGATTTATCGAGT
GTTGTAATTGTTGAAAAGGATAGGTATATGCATGCAGCTCCTCGTTTGAAATCTTATATCAAGTCTGAAGCTGTTCTAAGAATAATGGAACATTTAGAGTTACCCTTTCC
TCAGCTTGCACTTTTTCTCCAGTTTGTGCCTCTGTTTGTTCGAAATATTGTGTACGACAATATTGCAGATAATCGCTATACACTATTTGGACGCTCGGAGTCATGTGAAA
TATAG

mRNA sequence

Show/hide mRNA sequence

ATTTAACATAATCTCTTTACAATTTTATAGTGTTTCAAAACAATTAAAAATTTCCTTCAAATTGGTGGAGGAAAAGCCAATCTGCAACTGCCACTGTCTCCAATGGCGCT
TCCACTTCCCGGCGGAATTCCGGCACGTTTTGTCCCGCCGTCTACGGCGAAAGCTAGACTACCGCATCCAACTACTTCCGCCTCTTTATCTCCGATAACCAAAGACGAAA
CGATAGATTGGGTCGAAGCAACTTTCGACTTCTTCGAGAAAGATACGAGACCGATTATGCTATTTGACGGTGTGTGCAATTTGTGCAATGGAGGTGTAAGATTTGTTCGT
GCTAATGATCGAAACAGAAGAATACGATTTGAGGCTCTCCAAAGTGAAGCTGGTACGAGGCTGTTAAGAAGGTCAGGAAGAGCACCGGATGATTTATCGAGTGTTGTAAT
TGTTGAAAAGGATAGGTATATGCATGCAGCTCCTCGTTTGAAATCTTATATCAAGTCTGAAGCTGTTCTAAGAATAATGGAACATTTAGAGTTACCCTTTCCTCAGCTTG
CACTTTTTCTCCAGTTTGTGCCTCTGTTTGTTCGAAATATTGTGTACGACAATATTGCAGATAATCGCTATACACTATTTGGACGCTCGGAGTCATGTGAAATATAGAAT
TACTTGTATTATTAGGATTTGTGTATAATACTTGGGAATTAGAAATTTAGAAGTTAAGATCTTTGTTTGGTAATTAATACTATCAGGAATTGGAGCTGATATCATGGCAA
GCATAATAGACTTGCAGGGTCAACCTTTGGTATTGTTATCTGTTGCCTTTAAGAATTCTTAATGTTTGCTTAGTCAGTTCCTTTCATTGACCTTGGCATCACAACATTTC
TAATATCTCCTTTGAGTATAAATATTTCTTCCTTCATTCACCTGAGTTTAATAAACTTCCAATGCAAAAATACATGCATTGTCTGTATTTCAATTGTTACTCCTATAATA
CAAATCTAAGGAAATT

Protein sequence

Show/hide protein sequence

MALPLPGGIPARFVPPSTAKARLPHPTTSASLSPITKDETIDWVEATFDFFEKDTRPIMLFDGVCNLCNGGVRFVRANDRNRRIRFEALQSEAGTRLLRRSGRAPDDLSS
VVIVEKDRYMHAAPRLKSYIKSEAVLRIMEHLELPFPQLALFLQFVPLFVRNIVYDNIADNRYTLFGRSESCEI

Lsi07G004680 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome