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Lsi07G005050 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G005050
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionRas-related protein Rab7
Genome locationchr07:5308634..5312998
RNA-Seq ExpressionLsi07G005050
SyntenyLsi07G005050
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606765.1 hypothetical protein SDJN03_00107, partial [Cucurbita argyrosperma subsp. sororia]5.0e-5874.38Show/hide
Query:  MDAAEQHNPKPGFFDQILPPRLEDAGLEDCALPPDSIREAFFKAATAVKSRATGLLSPSDDDDP--------WSPTSRLPTDVVTGILPDRDAPAICATK
        MDAAE+H  KPG FDQILPPRLEDAGLEDCALPPDSIREAFFKAA+A+KS AT  LS  D +D         WSPT+ LPTDVVTGILP+ D PA CAT 
Subjt:  MDAAEQHNPKPGFFDQILPPRLEDAGLEDCALPPDSIREAFFKAATAVKSRATGLLSPSDDDDP--------WSPTSRLPTDVVTGILPDRDAPAICATK

Query:  KGLKLPEFGGDEVVIGGMEERRGKVCVVDGLEGLEIGDEAKKEKKSGEEEKKPILGEGFA
        KGLKLPEF  D VV+GGMEERRGK CVVD LEGLE+GDEAKK+K SGEEE++PIL EGFA
Subjt:  KGLKLPEFGGDEVVIGGMEERRGKVCVVDGLEGLEIGDEAKKEKKSGEEEKKPILGEGFA

XP_008447517.1 PREDICTED: uncharacterized protein LOC103489947 [Cucumis melo]2.2e-6988.31Show/hide
Query:  MDAAEQHNPKPGFFDQILPPRLEDAGLEDCALPPDSIREAFFKAATAVKSRATGLLSPSDD--DDPWSPTSRLPTDVVTGILPDRDAPAICATKKGLKLP
        MDAAE HNP+P FFDQILPPRLEDAGLED ALPPDSIREAFFKAA+AVKSRAT LLSP DD  DDPWSPTS LPTD+VTGILPD DAPAICAT+KGLKLP
Subjt:  MDAAEQHNPKPGFFDQILPPRLEDAGLEDCALPPDSIREAFFKAATAVKSRATGLLSPSDD--DDPWSPTSRLPTDVVTGILPDRDAPAICATKKGLKLP

Query:  EFGGDEVVIGGMEERRGKVCVVDGLEGLEIGDEAKKEKKSGEEEKKPILGEGFA
        EFG DEVVIGGMEERRGK CVVDGLEGLEIGDEA+KEKKSG+EE+KPILGEGFA
Subjt:  EFGGDEVVIGGMEERRGKVCVVDGLEGLEIGDEAKKEKKSGEEEKKPILGEGFA

XP_022949149.1 uncharacterized protein LOC111452587 [Cucurbita moschata]1.3e-5875Show/hide
Query:  MDAAEQHNPKPGFFDQILPPRLEDAGLEDCALPPDSIREAFFKAATAVKSRATGLLSPSDDDDP--------WSPTSRLPTDVVTGILPDRDAPAICATK
        MDAAE+H  KPG FDQILPPRLEDAGLEDCALPPDSIREAFFKAA+A+KS AT  LS  D +D         WSPT+ LPTDVVTGILP+ D PA CAT 
Subjt:  MDAAEQHNPKPGFFDQILPPRLEDAGLEDCALPPDSIREAFFKAATAVKSRATGLLSPSDDDDP--------WSPTSRLPTDVVTGILPDRDAPAICATK

Query:  KGLKLPEFGGDEVVIGGMEERRGKVCVVDGLEGLEIGDEAKKEKKSGEEEKKPILGEGFA
        KGLKLPEF  D VV+GGMEERRGK CVVD LEGLE+GDEAKK+KKSGEEE++PIL EGFA
Subjt:  KGLKLPEFGGDEVVIGGMEERRGKVCVVDGLEGLEIGDEAKKEKKSGEEEKKPILGEGFA

XP_023523630.1 uncharacterized protein LOC111787807 [Cucurbita pepo subsp. pepo]3.0e-5875Show/hide
Query:  MDAAEQHNPKPGFFDQILPPRLEDAGLEDCALPPDSIREAFFKAATAVKSRATGLLSPSDDDDP--------WSPTSRLPTDVVTGILPDRDAPAICATK
        MDAAE+H  KPG FDQILPPRLEDAGLEDCALPPDSIREAFFKAA+A+KS AT  LS  D DD         WSP + LPTDVVTGILP+ D PA CAT 
Subjt:  MDAAEQHNPKPGFFDQILPPRLEDAGLEDCALPPDSIREAFFKAATAVKSRATGLLSPSDDDDP--------WSPTSRLPTDVVTGILPDRDAPAICATK

Query:  KGLKLPEFGGDEVVIGGMEERRGKVCVVDGLEGLEIGDEAKKEKKSGEEEKKPILGEGFA
        KGLKLPEF  D VV+GGMEERRGK CVVD LEGLE+GDEAKK+KKSGEEE++PIL EGFA
Subjt:  KGLKLPEFGGDEVVIGGMEERRGKVCVVDGLEGLEIGDEAKKEKKSGEEEKKPILGEGFA

XP_038900451.1 uncharacterized protein LOC120087668 [Benincasa hispida]7.5e-7090.79Show/hide
Query:  MDAAEQHNPKPGFFDQILPPRLEDAGLEDCALPPDSIREAFFKAATAVKSRATGLLSPSDDDDPWSPTSRLPTDVVTGILPDRDAPAICATKKGLKLPEF
        MDAAEQHNP PG FDQILPPRLEDAGLEDCALPPDSIREAFFKAA+AVKS AT LLSPSDDDDPWSPTS LPTDVVTGILPDRD PA+CAT+KGLKLPE 
Subjt:  MDAAEQHNPKPGFFDQILPPRLEDAGLEDCALPPDSIREAFFKAATAVKSRATGLLSPSDDDDPWSPTSRLPTDVVTGILPDRDAPAICATKKGLKLPEF

Query:  GGDEVVIGGMEERRGKVCVVDGLEGLEIGDEAKKEKKSGEEEKKPILGEGFA
        GGDEVVIGGMEERRGK CVVDGLEGLEIGDEA KEKKSG+EE KPILGEGFA
Subjt:  GGDEVVIGGMEERRGKVCVVDGLEGLEIGDEAKKEKKSGEEEKKPILGEGFA

TrEMBL top hitse value%identityAlignment
A0A0A0LDD6 Uncharacterized protein7.3e-5577.42Show/hide
Query:  MDAAEQHNPKPGFFDQILPPRLEDAGLEDCALPPDSIREAFFKAATAVKSRATGLLSPSDDDD---PWSPTSRLPTDVVTGILPDRDAPAICATKKGLKL
        MDAAE HNP+P FF QILPPRLEDAGLED ALPPDSIREAFFKAA+AVKSRAT  LS SDD+D   P SPTS LPT        D DAPAICATKKGL+L
Subjt:  MDAAEQHNPKPGFFDQILPPRLEDAGLEDCALPPDSIREAFFKAATAVKSRATGLLSPSDDDD---PWSPTSRLPTDVVTGILPDRDAPAICATKKGLKL

Query:  PEFGGDEVVIGGMEERRGKVCVVDGLEGLEIGDEAKKEKKSGEEEKKPILGEGFA
        PEFG DEVVIGGMEERRGK CVVDGLEGLEIGD+A+KE    EE+KKP+LGEGFA
Subjt:  PEFGGDEVVIGGMEERRGKVCVVDGLEGLEIGDEAKKEKKSGEEEKKPILGEGFA

A0A1S3BI85 uncharacterized protein LOC1034899471.1e-6988.31Show/hide
Query:  MDAAEQHNPKPGFFDQILPPRLEDAGLEDCALPPDSIREAFFKAATAVKSRATGLLSPSDD--DDPWSPTSRLPTDVVTGILPDRDAPAICATKKGLKLP
        MDAAE HNP+P FFDQILPPRLEDAGLED ALPPDSIREAFFKAA+AVKSRAT LLSP DD  DDPWSPTS LPTD+VTGILPD DAPAICAT+KGLKLP
Subjt:  MDAAEQHNPKPGFFDQILPPRLEDAGLEDCALPPDSIREAFFKAATAVKSRATGLLSPSDD--DDPWSPTSRLPTDVVTGILPDRDAPAICATKKGLKLP

Query:  EFGGDEVVIGGMEERRGKVCVVDGLEGLEIGDEAKKEKKSGEEEKKPILGEGFA
        EFG DEVVIGGMEERRGK CVVDGLEGLEIGDEA+KEKKSG+EE+KPILGEGFA
Subjt:  EFGGDEVVIGGMEERRGKVCVVDGLEGLEIGDEAKKEKKSGEEEKKPILGEGFA

A0A5A7U9B5 Uncharacterized protein1.1e-6988.31Show/hide
Query:  MDAAEQHNPKPGFFDQILPPRLEDAGLEDCALPPDSIREAFFKAATAVKSRATGLLSPSDD--DDPWSPTSRLPTDVVTGILPDRDAPAICATKKGLKLP
        MDAAE HNP+P FFDQILPPRLEDAGLED ALPPDSIREAFFKAA+AVKSRAT LLSP DD  DDPWSPTS LPTD+VTGILPD DAPAICAT+KGLKLP
Subjt:  MDAAEQHNPKPGFFDQILPPRLEDAGLEDCALPPDSIREAFFKAATAVKSRATGLLSPSDD--DDPWSPTSRLPTDVVTGILPDRDAPAICATKKGLKLP

Query:  EFGGDEVVIGGMEERRGKVCVVDGLEGLEIGDEAKKEKKSGEEEKKPILGEGFA
        EFG DEVVIGGMEERRGK CVVDGLEGLEIGDEA+KEKKSG+EE+KPILGEGFA
Subjt:  EFGGDEVVIGGMEERRGKVCVVDGLEGLEIGDEAKKEKKSGEEEKKPILGEGFA

A0A6J1GBZ4 uncharacterized protein LOC1114525876.4e-5975Show/hide
Query:  MDAAEQHNPKPGFFDQILPPRLEDAGLEDCALPPDSIREAFFKAATAVKSRATGLLSPSDDDDP--------WSPTSRLPTDVVTGILPDRDAPAICATK
        MDAAE+H  KPG FDQILPPRLEDAGLEDCALPPDSIREAFFKAA+A+KS AT  LS  D +D         WSPT+ LPTDVVTGILP+ D PA CAT 
Subjt:  MDAAEQHNPKPGFFDQILPPRLEDAGLEDCALPPDSIREAFFKAATAVKSRATGLLSPSDDDDP--------WSPTSRLPTDVVTGILPDRDAPAICATK

Query:  KGLKLPEFGGDEVVIGGMEERRGKVCVVDGLEGLEIGDEAKKEKKSGEEEKKPILGEGFA
        KGLKLPEF  D VV+GGMEERRGK CVVD LEGLE+GDEAKK+KKSGEEE++PIL EGFA
Subjt:  KGLKLPEFGGDEVVIGGMEERRGKVCVVDGLEGLEIGDEAKKEKKSGEEEKKPILGEGFA

A0A6J1K989 uncharacterized protein LOC1114928317.1e-5072.6Show/hide
Query:  MDAAEQHNPKPGFFDQILPPRLEDAGLEDCALPPDSIREAFFKAATAVKSRATGLLSPSDDD--------DPWSPTSRLPTDVVTGILPDRDAPAICATK
        MDAAE+H  KPG FDQILPPRLEDAGLEDCALPPDSI EAFFKAA+A+KS ATG LS  + D        D WSPT+ L TDVVTGI P+ D PA CAT 
Subjt:  MDAAEQHNPKPGFFDQILPPRLEDAGLEDCALPPDSIREAFFKAATAVKSRATGLLSPSDDD--------DPWSPTSRLPTDVVTGILPDRDAPAICATK

Query:  KGLKLPEFGGDEVVIGGMEERRGKVCVVDGLEGLEIGDEAKKEKKS
        KGLKLPEF  D VV+GGMEERRGK C VD LEGLE+GDEAKK+KKS
Subjt:  KGLKLPEFGGDEVVIGGMEERRGKVCVVDGLEGLEIGDEAKKEKKS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G15230.1 unknown protein2.0e-2046.79Show/hide
Query:  EQHNPKPGFFDQILPPRLEDAGLEDCALPPDSIREAFFKAATAVKSRATGLLSPSDDDDPWS-PTSRLPTDVVTGILPDRDAPAICATKKGLKLPEF--G
        E    + G  D ILPP L DAGLEDCALPP+SI+EAF KAA AVKSRA  +    ++D   + P       ++ G   +RD     A K   KL E    
Subjt:  EQHNPKPGFFDQILPPRLEDAGLEDCALPPDSIREAFFKAATAVKSRATGLLSPSDDDDPWS-PTSRLPTDVVTGILPDRDAPAICATKKGLKLPEF--G

Query:  GDEVVIGGMEERRGKVCVVDGLEGLEI-GDEAKKEKK-----SGEEEKKPILGEGF
        GD VV G  EE  GK C VDGL+ L++ G E   EKK       EEE KPIL EGF
Subjt:  GDEVVIGGMEERRGKVCVVDGLEGLEI-GDEAKKEKK-----SGEEEKKPILGEGF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAGGTAAGGGAACGGGAAGTTTCGGTAAAAGGAGGAACAAGACCCACACTCTCTGTGTTAGGTGTGGCCGCCGCAGCTTCCACCTGCAGAAGAGTCGATGCTCT
GCCTGTGCATTTCCGGCCGCCCGTAAGCGTAAATGTACTGAAGCAGCGCCAAGGAACAAAGGAGCAGCAGCATCAGCCTAAGACATCGAAGGGTTTCTCATTCTTTCTCA
TTGTCATGGACGCAGCTGAACAGCACAATCCCAAACCAGGTTTCTTCGATCAAATCCTCCCTCCCCGTCTCGAAGACGCCGGCCTCGAAGATTGTGCCCTTCCTCCCGAT
TCCATTCGCGAAGCCTTCTTCAAGGCCGCCACCGCCGTCAAATCCAGGGCCACCGGCCTTCTTTCTCCCTCTGACGATGATGATCCATGGTCGCCTACTTCCAGACTACC
TACCGATGTCGTCACCGGAATCTTGCCGGACCGGGACGCTCCGGCGATTTGCGCGACGAAGAAGGGATTGAAATTGCCGGAATTTGGTGGAGACGAGGTCGTTATTGGGG
GAATGGAGGAGAGGAGAGGGAAGGTTTGTGTGGTAGATGGATTGGAAGGGTTGGAGATTGGCGATGAAGCCAAGAAGGAGAAGAAGAGCGGCGAAGAGGAGAAGAAACCT
ATTTTAGGTGAAGGTTTTGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAAGGTAAGGGAACGGGAAGTTTCGGTAAAAGGAGGAACAAGACCCACACTCTCTGTGTTAGGTGTGGCCGCCGCAGCTTCCACCTGCAGAAGAGTCGATGCTCT
GCCTGTGCATTTCCGGCCGCCCGTAAGCGTAAATGTACTGAAGCAGCGCCAAGGAACAAAGGAGCAGCAGCATCAGCCTAAGACATCGAAGGGTTTCTCATTCTTTCTCA
TTGTCATGGACGCAGCTGAACAGCACAATCCCAAACCAGGTTTCTTCGATCAAATCCTCCCTCCCCGTCTCGAAGACGCCGGCCTCGAAGATTGTGCCCTTCCTCCCGAT
TCCATTCGCGAAGCCTTCTTCAAGGCCGCCACCGCCGTCAAATCCAGGGCCACCGGCCTTCTTTCTCCCTCTGACGATGATGATCCATGGTCGCCTACTTCCAGACTACC
TACCGATGTCGTCACCGGAATCTTGCCGGACCGGGACGCTCCGGCGATTTGCGCGACGAAGAAGGGATTGAAATTGCCGGAATTTGGTGGAGACGAGGTCGTTATTGGGG
GAATGGAGGAGAGGAGAGGGAAGGTTTGTGTGGTAGATGGATTGGAAGGGTTGGAGATTGGCGATGAAGCCAAGAAGGAGAAGAAGAGCGGCGAAGAGGAGAAGAAACCT
ATTTTAGGTGAAGGTTTTGCTTGA
Protein sequenceShow/hide protein sequence
MAKVREREVSVKGGTRPTLSVLGVAAAASTCRRVDALPVHFRPPVSVNVLKQRQGTKEQQHQPKTSKGFSFFLIVMDAAEQHNPKPGFFDQILPPRLEDAGLEDCALPPD
SIREAFFKAATAVKSRATGLLSPSDDDDPWSPTSRLPTDVVTGILPDRDAPAICATKKGLKLPEFGGDEVVIGGMEERRGKVCVVDGLEGLEIGDEAKKEKKSGEEEKKP
ILGEGFA