; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi07G005140 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G005140
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionbet1-like SNARE 1-2
Genome locationchr07:5385034..5396276
RNA-Seq ExpressionLsi07G005140
SyntenyLsi07G005140
Gene Ontology termsGO:0015031 - protein transport (biological process)
GO:0030173 - integral component of Golgi membrane (cellular component)
InterPro domainsIPR039897 - BET1-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050807.1 bet1-like SNARE 1-2 isoform X2 [Cucumis melo var. makuwa]1.3e-1594Show/hide
Query:  EHRSSRSALFDDIEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRGTP
        EHRSSRSALFDD+EEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKR  P
Subjt:  EHRSSRSALFDDIEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRGTP
XP_004151397.1 bet1-like SNARE 1-2 [Cucumis sativus]2.2e-1595.92Show/hide
Query:  EHRSSRSALFDDIEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRGT
        EHRSSRSALFDD+EEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKR T
Subjt:  EHRSSRSALFDDIEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRGT
XP_008447527.1 PREDICTED: bet1-like SNARE 1-2 [Cucumis melo]2.2e-1595.92Show/hide
Query:  EHRSSRSALFDDIEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRGT
        EHRSSRSALFDD+EEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKR T
Subjt:  EHRSSRSALFDDIEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRGT
XP_038906833.1 bet1-like SNARE 1-2 isoform X1 [Benincasa hispida]2.9e-1593.88Show/hide
Query:  EHRSSRSALFDDIEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRGT
        EHRSSRSALFDD+EEGGLRTSSSVEIKEHDNDKALHTLEDR+SILKR T
Subjt:  EHRSSRSALFDDIEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRGT
XP_038906835.1 bet1-like SNARE 1-2 isoform X3 [Benincasa hispida]1.3e-1592Show/hide
Query:  LEHRSSRSALFDDIEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRGT
        +EHRSSRSALFDD+EEGGLRTSSSVEIKEHDNDKALHTLEDR+SILKR T
Subjt:  LEHRSSRSALFDDIEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRGT
TrEMBL top hitse value%identityAlignment
A0A0A0L808 t-SNARE coiled-coil homology domain-containing protein1.1e-1595.92Show/hide
Query:  EHRSSRSALFDDIEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRGT
        EHRSSRSALFDD+EEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKR T
Subjt:  EHRSSRSALFDDIEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRGT
A0A1S3BHN2 bet1-like SNARE 1-21.1e-1595.92Show/hide
Query:  EHRSSRSALFDDIEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRGT
        EHRSSRSALFDD+EEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKR T
Subjt:  EHRSSRSALFDDIEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRGT
A0A5D3CBG8 Bet1-like SNARE 1-2 isoform X26.4e-1694Show/hide
Query:  EHRSSRSALFDDIEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRGTP
        EHRSSRSALFDD+EEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKR  P
Subjt:  EHRSSRSALFDDIEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRGTP
A0A6J1C943 bet1-like SNARE 1-23.2e-1593.88Show/hide
Query:  EHRSSRSALFDDIEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRGT
        EHRSSRSALFDD+EEGGLRTSSSVEIKEHDNDKALH+LEDRVSILKR T
Subjt:  EHRSSRSALFDDIEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRGT
A0A6J1KMZ6 bet1-like SNARE 1-29.5e-1286Show/hide
Query:  EHRSSRSALFDDIEEGGLRTS-SSVEIKEHDNDKALHTLEDRVSILKRGT
        EHRSSRSALFDD+EEGGLR S S+VEIKEHDND+AL TLEDRVSILKR T
Subjt:  EHRSSRSALFDDIEEGGLRTS-SSVEIKEHDNDKALHTLEDRVSILKRGT
SwissProt top hitse value%identityAlignment
Q94CG2 Bet1-like SNARE 1-24.4e-0657.69Show/hide
Query:  EHRSSRSALF---DDIEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRGT
        E+R+SR++LF   D +EEG LR SSS    E DND+AL  L+DRVS LKR T
Subjt:  EHRSSRSALF---DDIEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRGT
Q9M2J9 Bet1-like SNARE 1-15.2e-0759.18Show/hide
Query:  EHRSSRSALFDDIEEGGLRTSSSV--EIKEHDNDKALHTLEDRVSILKR
        E R  RS+LFD IEEGG+R +SS   EI EH+N++AL  L+DRV +LKR
Subjt:  EHRSSRSALFDDIEEGGLRTSSSV--EIKEHDNDKALHTLEDRVSILKR
Arabidopsis top hitse value%identityAlignment
AT3G58170.1 BET1P/SFT1P-like protein 14A3.7e-0859.18Show/hide
Query:  EHRSSRSALFDDIEEGGLRTSSSV--EIKEHDNDKALHTLEDRVSILKR
        E R  RS+LFD IEEGG+R +SS   EI EH+N++AL  L+DRV +LKR
Subjt:  EHRSSRSALFDDIEEGGLRTSSSV--EIKEHDNDKALHTLEDRVSILKR
AT4G14455.1 Target SNARE coiled-coil domain protein3.1e-0757.69Show/hide
Query:  EHRSSRSALF---DDIEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRGT
        E+R+SR++LF   D +EEG LR SSS    E DND+AL  L+DRVS LKR T
Subjt:  EHRSSRSALF---DDIEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRGT

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAACTGGAGCACCGTTCTTCTAGATCTGCTCTCTTTGATGACATCGAGGAGGGTGGTCTCAGGACTAGCTCTTCCGTTGAAATTAAAGAGCATGACAATGACAAAGC
CCTCCATACTTTGGAAGATAGAGTTTCTATTCTGAAGAGGGGCACACCAAGAGAGCCGAAATCTGAATCCAGCCCGTCCATGCCGAAGAACCCAGAACGGGAAACAGGAT
CATAA
mRNA sequenceShow/hide mRNA sequence
ATGCAACTGGAGCACCGTTCTTCTAGATCTGCTCTCTTTGATGACATCGAGGAGGGTGGTCTCAGGACTAGCTCTTCCGTTGAAATTAAAGAGCATGACAATGACAAAGC
CCTCCATACTTTGGAAGATAGAGTTTCTATTCTGAAGAGGGGCACACCAAGAGAGCCGAAATCTGAATCCAGCCCGTCCATGCCGAAGAACCCAGAACGGGAAACAGGAT
CATAA
Protein sequenceShow/hide protein sequence
MQLEHRSSRSALFDDIEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRGTPREPKSESSPSMPKNPERETGS