; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi07G005300 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G005300
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionOxidative stress 3, putative isoform 2
Genome locationchr07:5640546..5641779
RNA-Seq ExpressionLsi07G005300
SyntenyLsi07G005300
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149181.1 uncharacterized protein LOC101218329 [Cucumis sativus]1.1e-8587.89Show/hide
Query:  MGEIQRFILHQPCSVTVHQEFHEELEDHWTITKGDDHYNVASSTSSLEDSTISSESLSSLDLADDACSLTSNSSSQSNGPLEDFTELFAQLPIKRGLSMF
        MGE+ RF+LHQPCS T+HQ+FHEEL DHWTITKG D YNVASSTSS EDSTISSESLSS DLADDACS TSNSSSQSNGPLEDFT+L AQLPIKRGLSMF
Subjt:  MGEIQRFILHQPCSVTVHQEFHEELEDHWTITKGDDHYNVASSTSSLEDSTISSESLSSLDLADDACSLTSNSSSQSNGPLEDFTELFAQLPIKRGLSMF

Query:  YQGKSQSFTSLSSVKSIEDLPKKENPYTRRLNTCKSYAGGLDTHKSSYTLPKAPTFKKASKSSLSFVQVRRGSTLAGCRPPSIPVYDESF
        YQGKS+SF SLSSVKSIED+PKK NPY RRLNTCKSYAGGLD HKSSYTLPKAPTFKKASKSSLSFVQVRRGS LAGCRPP IP+YDESF
Subjt:  YQGKSQSFTSLSSVKSIEDLPKKENPYTRRLNTCKSYAGGLDTHKSSYTLPKAPTFKKASKSSLSFVQVRRGSTLAGCRPPSIPVYDESF

XP_008447561.1 PREDICTED: uncharacterized protein LOC103489976 [Cucumis melo]2.1e-8988.95Show/hide
Query:  MGEIQRFILHQPCSVTVHQEFHEELEDHWTITKGDDHYNVASSTSSLEDSTISSESLSSLDLADDACSLTSNSSSQSNGPLEDFTELFAQLPIKRGLSMF
        MGE+QRF+LHQPCS T+HQ+FHE+LEDHW ITKG D YNVASSTSS EDSTISSESLSS DLADDACS TSNSSSQSNGPLEDFT+LFAQLPIKRGLSMF
Subjt:  MGEIQRFILHQPCSVTVHQEFHEELEDHWTITKGDDHYNVASSTSSLEDSTISSESLSSLDLADDACSLTSNSSSQSNGPLEDFTELFAQLPIKRGLSMF

Query:  YQGKSQSFTSLSSVKSIEDLPKKENPYTRRLNTCKSYAGGLDTHKSSYTLPKAPTFKKASKSSLSFVQVRRGSTLAGCRPPSIPVYDESF
        YQGKS+SFTSLSSVKSIED+PKK NPY+RRLNTCKSYAGGLDTHKSSYTLPKAPTFKKASKSSLSFV VRRGS LAGCRPP IP+YDESF
Subjt:  YQGKSQSFTSLSSVKSIEDLPKKENPYTRRLNTCKSYAGGLDTHKSSYTLPKAPTFKKASKSSLSFVQVRRGSTLAGCRPPSIPVYDESF

XP_022153661.1 uncharacterized protein LOC111021114 [Momordica charantia]4.1e-6978.42Show/hide
Query:  MGEIQRFILHQPCSVTVHQEFHEELEDHWTITKGDDHYNVASSTSSLEDSTISSESLSSLDLADDACSLTSNSSSQSNGPLEDFTELFAQLPIKRGLSMF
        MG IQR  L +  SV V QEFHE LE+HW ++K  DHYNVASSTSS EDS++SS SLSS+   +DACS TSN+SS+S+GPLEDFTEL AQLPIKRGLSMF
Subjt:  MGEIQRFILHQPCSVTVHQEFHEELEDHWTITKGDDHYNVASSTSSLEDSTISSESLSSLDLADDACSLTSNSSSQSNGPLEDFTELFAQLPIKRGLSMF

Query:  YQGKSQSFTSLSSVKSIEDLPKKENPYTRRLNTCKSYAGGLDTHKSSYTLPKAPTFKKASKSSLSFVQVRRGSTLAGCRPPSIPVYDESF
        YQGKSQSFTSLSSVKSIEDLPKKENPY+RRLN  KSYAGGLDTHKSSYTLPKAPTFKKAS+SS+SFVQVRRGST      PSIPVYDESF
Subjt:  YQGKSQSFTSLSSVKSIEDLPKKENPYTRRLNTCKSYAGGLDTHKSSYTLPKAPTFKKASKSSLSFVQVRRGSTLAGCRPPSIPVYDESF

XP_023524906.1 uncharacterized protein LOC111788696 [Cucurbita pepo subsp. pepo]5.5e-5072.33Show/hide
Query:  ILHQPCSVTVHQEFHEELEDHWTITKGDDHYNVASSTSSLEDSTISSESLSSLDLADDACSLTSNSSSQSNGPLEDFTELFAQLPIKRGLSMFYQGKSQS
        +LHQPCSV + + FHEELED W       HYN+ASSTSS EDS+ SS         DDACS TSNSSS SNG LEDFTELFAQLPIKRGLSMFY+GKSQS
Subjt:  ILHQPCSVTVHQEFHEELEDHWTITKGDDHYNVASSTSSLEDSTISSESLSSLDLADDACSLTSNSSSQSNGPLEDFTELFAQLPIKRGLSMFYQGKSQS

Query:  FTSLSSVKSIEDLPKKENPYTRRLNTCKSYAGGLDTHK-SSYTLPKAPTFKKASKSSLS
        FTSLSSV+SIEDLPKK +PY+ RL+ CKSYAGGLDTHK ++YTLPKAP+FKKAS SS S
Subjt:  FTSLSSVKSIEDLPKKENPYTRRLNTCKSYAGGLDTHK-SSYTLPKAPTFKKASKSSLS

XP_038877919.1 uncharacterized protein LOC120070129 [Benincasa hispida]5.5e-9092.67Show/hide
Query:  MGEIQRFILHQPCSVTVHQEFHEELEDHWTITKGDD-HYNVASSTSSLEDSTISSESLSSLDLADDACSLTSNSSSQSNGPLEDFTELFAQLPIKRGLSM
        MGEIQR +LHQPCSVTVHQEFH  LED WT TKGDD +YNVASSTSS EDSTISSESLSSLDLADDACS TSNSSSQSNGPLEDFTELFAQLPIKRGLSM
Subjt:  MGEIQRFILHQPCSVTVHQEFHEELEDHWTITKGDD-HYNVASSTSSLEDSTISSESLSSLDLADDACSLTSNSSSQSNGPLEDFTELFAQLPIKRGLSM

Query:  FYQGKSQSFTSLSSVKSIEDLPKKENPYTRRLNTCKSYAGGLDTHKSSYTLPKAPTFKKASKSSLSFVQVRRGSTLAGCRPPSIPVYDESF
        FYQGKSQSFTSLSSVKSIEDLPKK N Y+RRLNTCKSYAGGLD HKSSYTLPKAPTFKKASKSSLSFVQVRRGSTLAGCRPPSIPVYDESF
Subjt:  FYQGKSQSFTSLSSVKSIEDLPKKENPYTRRLNTCKSYAGGLDTHKSSYTLPKAPTFKKASKSSLSFVQVRRGSTLAGCRPPSIPVYDESF

TrEMBL top hitse value%identityAlignment
A0A0A0L8C9 Uncharacterized protein5.2e-8687.89Show/hide
Query:  MGEIQRFILHQPCSVTVHQEFHEELEDHWTITKGDDHYNVASSTSSLEDSTISSESLSSLDLADDACSLTSNSSSQSNGPLEDFTELFAQLPIKRGLSMF
        MGE+ RF+LHQPCS T+HQ+FHEEL DHWTITKG D YNVASSTSS EDSTISSESLSS DLADDACS TSNSSSQSNGPLEDFT+L AQLPIKRGLSMF
Subjt:  MGEIQRFILHQPCSVTVHQEFHEELEDHWTITKGDDHYNVASSTSSLEDSTISSESLSSLDLADDACSLTSNSSSQSNGPLEDFTELFAQLPIKRGLSMF

Query:  YQGKSQSFTSLSSVKSIEDLPKKENPYTRRLNTCKSYAGGLDTHKSSYTLPKAPTFKKASKSSLSFVQVRRGSTLAGCRPPSIPVYDESF
        YQGKS+SF SLSSVKSIED+PKK NPY RRLNTCKSYAGGLD HKSSYTLPKAPTFKKASKSSLSFVQVRRGS LAGCRPP IP+YDESF
Subjt:  YQGKSQSFTSLSSVKSIEDLPKKENPYTRRLNTCKSYAGGLDTHKSSYTLPKAPTFKKASKSSLSFVQVRRGSTLAGCRPPSIPVYDESF

A0A1S3BH50 uncharacterized protein LOC1034899761.0e-8988.95Show/hide
Query:  MGEIQRFILHQPCSVTVHQEFHEELEDHWTITKGDDHYNVASSTSSLEDSTISSESLSSLDLADDACSLTSNSSSQSNGPLEDFTELFAQLPIKRGLSMF
        MGE+QRF+LHQPCS T+HQ+FHE+LEDHW ITKG D YNVASSTSS EDSTISSESLSS DLADDACS TSNSSSQSNGPLEDFT+LFAQLPIKRGLSMF
Subjt:  MGEIQRFILHQPCSVTVHQEFHEELEDHWTITKGDDHYNVASSTSSLEDSTISSESLSSLDLADDACSLTSNSSSQSNGPLEDFTELFAQLPIKRGLSMF

Query:  YQGKSQSFTSLSSVKSIEDLPKKENPYTRRLNTCKSYAGGLDTHKSSYTLPKAPTFKKASKSSLSFVQVRRGSTLAGCRPPSIPVYDESF
        YQGKS+SFTSLSSVKSIED+PKK NPY+RRLNTCKSYAGGLDTHKSSYTLPKAPTFKKASKSSLSFV VRRGS LAGCRPP IP+YDESF
Subjt:  YQGKSQSFTSLSSVKSIEDLPKKENPYTRRLNTCKSYAGGLDTHKSSYTLPKAPTFKKASKSSLSFVQVRRGSTLAGCRPPSIPVYDESF

A0A5D3CBD2 Oxidative stress 3, putative isoform 21.0e-8988.95Show/hide
Query:  MGEIQRFILHQPCSVTVHQEFHEELEDHWTITKGDDHYNVASSTSSLEDSTISSESLSSLDLADDACSLTSNSSSQSNGPLEDFTELFAQLPIKRGLSMF
        MGE+QRF+LHQPCS T+HQ+FHE+LEDHW ITKG D YNVASSTSS EDSTISSESLSS DLADDACS TSNSSSQSNGPLEDFT+LFAQLPIKRGLSMF
Subjt:  MGEIQRFILHQPCSVTVHQEFHEELEDHWTITKGDDHYNVASSTSSLEDSTISSESLSSLDLADDACSLTSNSSSQSNGPLEDFTELFAQLPIKRGLSMF

Query:  YQGKSQSFTSLSSVKSIEDLPKKENPYTRRLNTCKSYAGGLDTHKSSYTLPKAPTFKKASKSSLSFVQVRRGSTLAGCRPPSIPVYDESF
        YQGKS+SFTSLSSVKSIED+PKK NPY+RRLNTCKSYAGGLDTHKSSYTLPKAPTFKKASKSSLSFV VRRGS LAGCRPP IP+YDESF
Subjt:  YQGKSQSFTSLSSVKSIEDLPKKENPYTRRLNTCKSYAGGLDTHKSSYTLPKAPTFKKASKSSLSFVQVRRGSTLAGCRPPSIPVYDESF

A0A6J1DLD1 uncharacterized protein LOC1110211142.0e-6978.42Show/hide
Query:  MGEIQRFILHQPCSVTVHQEFHEELEDHWTITKGDDHYNVASSTSSLEDSTISSESLSSLDLADDACSLTSNSSSQSNGPLEDFTELFAQLPIKRGLSMF
        MG IQR  L +  SV V QEFHE LE+HW ++K  DHYNVASSTSS EDS++SS SLSS+   +DACS TSN+SS+S+GPLEDFTEL AQLPIKRGLSMF
Subjt:  MGEIQRFILHQPCSVTVHQEFHEELEDHWTITKGDDHYNVASSTSSLEDSTISSESLSSLDLADDACSLTSNSSSQSNGPLEDFTELFAQLPIKRGLSMF

Query:  YQGKSQSFTSLSSVKSIEDLPKKENPYTRRLNTCKSYAGGLDTHKSSYTLPKAPTFKKASKSSLSFVQVRRGSTLAGCRPPSIPVYDESF
        YQGKSQSFTSLSSVKSIEDLPKKENPY+RRLN  KSYAGGLDTHKSSYTLPKAPTFKKAS+SS+SFVQVRRGST      PSIPVYDESF
Subjt:  YQGKSQSFTSLSSVKSIEDLPKKENPYTRRLNTCKSYAGGLDTHKSSYTLPKAPTFKKASKSSLSFVQVRRGSTLAGCRPPSIPVYDESF

A0A6J1KCR8 uncharacterized protein LOC1114926995.0e-4973.08Show/hide
Query:  LHQPCSVTVHQEFHEELEDHWTITKGDDHYNVASSTSSLEDSTISSESLSSLDLADDACSLTSNSSSQSNGPLEDFTELFAQLPIKRGLSMFYQGKSQSF
        LHQPCSV + Q FHEE ED W    G+ HYN+ASSTSS EDS+ SS         DDACS TSNSSS S G LEDFTELFAQLPIKRGLSMFY+GKSQSF
Subjt:  LHQPCSVTVHQEFHEELEDHWTITKGDDHYNVASSTSSLEDSTISSESLSSLDLADDACSLTSNSSSQSNGPLEDFTELFAQLPIKRGLSMFYQGKSQSF

Query:  TSLSSVKSIEDLPKKENPYTRRLNTCKSYAGGLDTHK-SSYTLPKAPTFKKASKSS
        TSLSSV+SIEDLPKK +PY+ RL+ CKSYAGGLDTHK ++YTLPKAP+FKKAS SS
Subjt:  TSLSSVKSIEDLPKKENPYTRRLNTCKSYAGGLDTHK-SSYTLPKAPTFKKASKSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G43850.1 unknown protein1.2e-0740.37Show/hide
Query:  ITKGDDHYNVASSTSSLEDSTISSESLSSLDLADDACSLTSNSSSQSNGPLEDFTELFAQLPIKRGLSMFYQGKSQSFTSLSSVKS--IEDLPKKENPYT
        I K D  + V    + L  ST SS+S+   + +DD     +   S  NGPL+    L   LPIKR +S FY+GKS+SF SLS   S  ++DL K EN Y+
Subjt:  ITKGDDHYNVASSTSSLEDSTISSESLSSLDLADDACSLTSNSSSQSNGPLEDFTELFAQLPIKRGLSMFYQGKSQSFTSLSSVKS--IEDLPKKENPYT

Query:  RRLNTCKSY
        RR     S+
Subjt:  RRLNTCKSY

AT4G26288.1 FUNCTIONS IN: molecular_function unknown6.1e-1543.94Show/hide
Query:  VASSTSSLEDSTISSESLSSLDLADDACSLTSNSSSQSNGPLEDFTELFAQLPI----KRGLSMFYQGKSQSFTSLSSVKSIEDLPKKENPYTRRLNTCK
        +  S SS + S+ SS S+ S DL +DA S +S+SSS SNGP +D ++L +QLPI    K GLS +Y+GKSQSFTSL++V S++DL K+    +R  + CK
Subjt:  VASSTSSLEDSTISSESLSSLDLADDACSLTSNSSSQSNGPLEDFTELFAQLPI----KRGLSMFYQGKSQSFTSLSSVKSIEDLPKKENPYTRRLNTCK

Query:  -SYAGGLDTHKSSYTLPKAPTFKKASKSSLSF
          Y  G    K++ ++    T  K S S L+F
Subjt:  -SYAGGLDTHKSSYTLPKAPTFKKASKSSLSF

AT5G21940.1 unknown protein6.2e-0732.68Show/hide
Query:  ASSTSSLEDSTISSES----LSSLDLADDACSLTSNSSSQSNGPLEDFTELFAQLPIKRGLSMFYQGKSQSFT--------SLSSVKSIEDLPKKENPYT
        +SS SS   S+I   S     SS D  DDA    +   S   GPLE    L   LP+++G+S +Y GKS+SFT        +L+S  S++DL K ENPY+
Subjt:  ASSTSSLEDSTISSES----LSSLDLADDACSLTSNSSSQSNGPLEDFTELFAQLPIKRGLSMFYQGKSQSFT--------SLSSVKSIEDLPKKENPYT

Query:  RRLNTCKSYAGGLDTHKSSYTLPKAPTFKK----ASKSSLSFVQVRRGSTLAG
        RR      +       +++ T P+    KK    +S+S+L+         + G
Subjt:  RRLNTCKSYAGGLDTHKSSYTLPKAPTFKK----ASKSSLSFVQVRRGSTLAG

AT5G24890.1 unknown protein5.2e-0643.33Show/hide
Query:  LEDFTELFAQLPIKRGLSMFYQGKSQSFTSLSSVKSIEDLPKKENPYT--RRLNTCKSYA
        L   + L   LP KRGLS  Y+GKS+SF +L  + S++++ K+ENP    RRL  C   A
Subjt:  LEDFTELFAQLPIKRGLSMFYQGKSQSFTSLSSVKSIEDLPKKENPYT--RRLNTCKSYA

AT5G56550.1 oxidative stress 31.5e-1644.14Show/hide
Query:  EDHWTITKGDDHYNVASSTSSLEDSTISSESLSSLDLAD--DACSLTSNSSSQSNGPLEDFTELFAQLPIKRGLSMFYQGKSQSFTSLSSVKSIEDLPK-
        ED   I + +D     S+T S E+   SS SLSS   +D  +       SSS SNGPLED ++L + LPIKRGLS FY+GKSQSFTSL +VKS+EDL K 
Subjt:  EDHWTITKGDDHYNVASSTSSLEDSTISSESLSSLDLAD--DACSLTSNSSSQSNGPLEDFTELFAQLPIKRGLSMFYQGKSQSFTSLSSVKSIEDLPK-

Query:  --KENPYTRRLNTCKSYAGGLDTHKSSYTLPKAPTFKKASKSSLS
          K   Y  +  + +S  G LD        PKA   KK +++  S
Subjt:  --KENPYTRRLNTCKSYAGGLDTHKSSYTLPKAPTFKKASKSSLS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGAAATACAGAGATTTATACTTCATCAACCATGTTCAGTTACAGTACACCAAGAGTTCCATGAAGAGTTAGAAGATCATTGGACGATCACCAAGGGAGATGATCA
CTACAACGTTGCATCTTCAACATCATCATTAGAAGACTCAACGATTTCGAGTGAATCACTATCTTCATTAGACTTAGCAGACGATGCATGTTCATTGACTTCAAATTCTT
CATCTCAATCTAATGGACCATTGGAGGATTTCACAGAGCTTTTTGCTCAACTGCCAATCAAGAGAGGACTATCAATGTTCTATCAGGGGAAGTCTCAGTCTTTTACATCT
CTATCAAGTGTAAAGAGCATAGAAGACCTCCCAAAGAAGGAAAATCCATACACTAGGAGGCTGAATACATGTAAGAGCTATGCAGGTGGCTTGGACACCCACAAGTCTTC
TTATACCCTTCCAAAGGCTCCAACTTTTAAGAAGGCATCAAAAAGTTCTCTGTCCTTTGTCCAAGTTAGGAGAGGCAGTACTTTGGCTGGTTGTAGACCTCCTTCCATTC
CTGTATATGATGAGAGCTTTTGA
mRNA sequenceShow/hide mRNA sequence
CTTTTGTGCTTTCAGGGTCACTGGTTGACATTTTCTTTCTTTTGCCCCATATTTTATGATGACCTTTCTTTTGGTTGTTTGGAGATCCCATGCCTCTACATGTGAAACCT
GCAATTTCCCTGTAATTTCCTTTTGAAAAATAGGCAACCACTCTTGGAATTCTCTTTCTTTTTATAATTGGATGCCTATAAAAATGTTCCACAATAAATGTCAGAGACCC
AAAGTTATTTATGTTCAAAGGGGTTATCTTATATAAATACATCAAAAGCTCAGGCCACCAAAAGCACCAAACCTTATCAAATTCTGTTTTTTCTTTCTACTTGTGGGTTT
TGCTCTTTTGTTCCTGTTCTTCATCTTCTTCATCTTCTTCATTATGGGTGAAATACAGAGATTTATACTTCATCAACCATGTTCAGTTACAGTACACCAAGAGTTCCATG
AAGAGTTAGAAGATCATTGGACGATCACCAAGGGAGATGATCACTACAACGTTGCATCTTCAACATCATCATTAGAAGACTCAACGATTTCGAGTGAATCACTATCTTCA
TTAGACTTAGCAGACGATGCATGTTCATTGACTTCAAATTCTTCATCTCAATCTAATGGACCATTGGAGGATTTCACAGAGCTTTTTGCTCAACTGCCAATCAAGAGAGG
ACTATCAATGTTCTATCAGGGGAAGTCTCAGTCTTTTACATCTCTATCAAGTGTAAAGAGCATAGAAGACCTCCCAAAGAAGGAAAATCCATACACTAGGAGGCTGAATA
CATGTAAGAGCTATGCAGGTGGCTTGGACACCCACAAGTCTTCTTATACCCTTCCAAAGGCTCCAACTTTTAAGAAGGCATCAAAAAGTTCTCTGTCCTTTGTCCAAGTT
AGGAGAGGCAGTACTTTGGCTGGTTGTAGACCTCCTTCCATTCCTGTATATGATGAGAGCTTTTGATCCCTGAGCACTTCCAACATTAAATTGGCCATTTTTTCCACTTA
ACTTTTACTTGTACAATAGGAATGCAAATGAAAATCATGTGGCTGGCTTTATAGCCAATTTTTACTCTCTCAGCATTAATGAGAGCTTCTGATGGAAATTCTATTATACT
TAAATCCCACGGCTTATTTTCTTTCCCAAATA
Protein sequenceShow/hide protein sequence
MGEIQRFILHQPCSVTVHQEFHEELEDHWTITKGDDHYNVASSTSSLEDSTISSESLSSLDLADDACSLTSNSSSQSNGPLEDFTELFAQLPIKRGLSMFYQGKSQSFTS
LSSVKSIEDLPKKENPYTRRLNTCKSYAGGLDTHKSSYTLPKAPTFKKASKSSLSFVQVRRGSTLAGCRPPSIPVYDESF