; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi07G005730 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G005730
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionmediator of RNA polymerase II transcription subunit 9-like
Genome locationchr07:6090904..6094544
RNA-Seq ExpressionLsi07G005730
SyntenyLsi07G005730
Gene Ontology termsGO:0016592 - mediator complex (cellular component)
InterPro domainsIPR038790 - Mediator of RNA polymerase II transcription subunit 9, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574160.1 Mediator of RNA polymerase II transcription subunit 9, partial [Cucurbita argyrosperma subsp. sororia]1.3e-8076.37Show/hide
Query:  MDFSGGGNWSMIPNIPNLTNSSNLSNQDSLFLQQQQFSLQQQQQPQQQQQQQSFLH--QQQFQPQIQPQQQFQQQQPSPQFQQQQLSPQIQPQQQPSPQF
        MDFS GGNWSMIPNIPNL+NSSNLSNQ+SL+LQQQQFSLQQQQQ QQQQQQQ   H  QQQFQPQIQ QQQFQQQQ SPQFQQQQ SPQIQPQQQPSPQF
Subjt:  MDFSGGGNWSMIPNIPNLTNSSNLSNQDSLFLQQQQFSLQQQQQPQQQQQQQSFLH--QQQFQPQIQPQQQFQQQQPSPQFQQQQLSPQIQPQQQPSPQF

Query:  QQQLQPQHYPQQQQQQQQQQQQQQQQQYHFQQQQQQRLLQQQQQQQQQQQQQHQQQQQQQYHQHQSLASHFHLLHLVEKLADAIENGARDQQSDALVNDL
        QQQLQPQH+P       QQQQQQQQQQYHF            QQQQQQQQQQ QQQQQQQYHQHQSLASHFHL HLVEKLAD IENGARDQQSDALVNDL
Subjt:  QQQLQPQHYPQQQQQQQQQQQQQQQQQYHFQQQQQQRLLQQQQQQQQQQQQQHQQQQQQQYHQHQSLASHFHLLHLVEKLADAIENGARDQQSDALVNDL

Query:  NNHFEKCQQLLNSISGSLSSKAMVYWNTVFFFLYAQTVEGQKKKLEEHEQLLNHRRYGDCHFLPLVFGKLSHSSMELIGKYKNSVEELVKGD
        NNHFEKCQQLLNSISGSLSSKAM             TVEGQKKKLEEHEQLLNHRR                   ELIGKYKNSVEELVKG+
Subjt:  NNHFEKCQQLLNSISGSLSSKAMVYWNTVFFFLYAQTVEGQKKKLEEHEQLLNHRRYGDCHFLPLVFGKLSHSSMELIGKYKNSVEELVKGD

XP_011652352.2 mediator of RNA polymerase II transcription subunit 9 [Cucumis sativus]4.8e-8079.26Show/hide
Query:  MDFSGGGNWSMIPNIPNLTNSSNLSNQDSLFLQQQQFSL--QQQQQPQQQQQQQSFLH-QQQFQPQIQPQQQFQQQQPSPQFQQQQLSPQIQPQQQPSPQ
        MDF GGGNWSMIPNIPNLTNSSNLS Q+S+FLQQQQFSL  QQQQQ QQQQQQQ+F H QQQFQPQIQPQQQFQQQQ SPQFQQQQ SPQIQPQQQPSPQ
Subjt:  MDFSGGGNWSMIPNIPNLTNSSNLSNQDSLFLQQQQFSL--QQQQQPQQQQQQQSFLH-QQQFQPQIQPQQQFQQQQPSPQFQQQQLSPQIQPQQQPSPQ

Query:  FQQQLQPQHYPQQQQQQQQQQ-----QQQQQQQYHFQQQQQQRLLQQQQQQQQQQQQQHQQQQQQQYHQHQSLASHFHLLHLVEKLADAIENGARDQQSD
        FQQQLQ QH+PQQQQQQQQQQ     QQQQQQQ   QQQQQQ+  QQQQQQQQQQQQQ QQQQQQQYHQHQSLASHFHLLHLVEKLADAIENG RDQQSD
Subjt:  FQQQLQPQHYPQQQQQQQQQQ-----QQQQQQQYHFQQQQQQRLLQQQQQQQQQQQQQHQQQQQQQYHQHQSLASHFHLLHLVEKLADAIENGARDQQSD

Query:  ALVNDLNNHFEKCQQLLNSISGSLSSKAMVYWNTVFFFLYAQTVEGQKKKLEEHEQLLNHRRYGDCHFLPLVFGKLSHSSMELIGKYKNSVEELVKGDP
        ALVNDLNNHFEKC+QLLNSISGSLSSKAM             TVEGQKKKLEEHEQLL+HRR                   ELIGKYKNSVEELVKG+P
Subjt:  ALVNDLNNHFEKCQQLLNSISGSLSSKAMVYWNTVFFFLYAQTVEGQKKKLEEHEQLLNHRRYGDCHFLPLVFGKLSHSSMELIGKYKNSVEELVKGDP

XP_022944890.1 mediator of RNA polymerase II transcription subunit 9-like [Cucurbita moschata]6.7e-8278.01Show/hide
Query:  MDFSGGGNWSMIPNIPNLTNSSNLSNQDSLFLQQQQFSLQQQQQPQQQQQQQSFLH-QQQFQPQIQPQQQFQQQQPSPQFQQQQLSPQIQPQQQPSPQFQ
        MDFS GGNWSMIPNIPNL+NSSNLSNQ+SL+LQQQQFSLQQQQQ QQQQQQQSF H QQQFQPQIQ QQQFQQQQ SPQFQQQQ SPQ QPQQQPSPQFQ
Subjt:  MDFSGGGNWSMIPNIPNLTNSSNLSNQDSLFLQQQQFSLQQQQQPQQQQQQQSFLH-QQQFQPQIQPQQQFQQQQPSPQFQQQQLSPQIQPQQQPSPQFQ

Query:  QQLQPQHYPQQQQQQQQQQQQQQQQQYHFQQQQQQRLLQQQQQQQQQQQQQHQQQQQQQYHQHQSLASHFHLLHLVEKLADAIENGARDQQSDALVNDLN
        QQLQPQH+P     QQQQQQQQQQQQYHF           QQQQQQQQQQQ QQQQQQQYHQHQSLASHFHL HLVEKLAD IENGARDQQSDALVNDLN
Subjt:  QQLQPQHYPQQQQQQQQQQQQQQQQQYHFQQQQQQRLLQQQQQQQQQQQQQHQQQQQQQYHQHQSLASHFHLLHLVEKLADAIENGARDQQSDALVNDLN

Query:  NHFEKCQQLLNSISGSLSSKAMVYWNTVFFFLYAQTVEGQKKKLEEHEQLLNHRRYGDCHFLPLVFGKLSHSSMELIGKYKNSVEELVKGD
        NHFEKCQQLLNSISGSLSSKAM             TVEGQKKKLEEHEQLLNHRR                   ELIGKYKNSVEELVKG+
Subjt:  NHFEKCQQLLNSISGSLSSKAMVYWNTVFFFLYAQTVEGQKKKLEEHEQLLNHRRYGDCHFLPLVFGKLSHSSMELIGKYKNSVEELVKGD

XP_023542032.1 mediator of RNA polymerase II transcription subunit 9-like [Cucurbita pepo subsp. pepo]8.8e-8279.38Show/hide
Query:  MDFSGGGNWSMIPNIPNLTNSSNLSNQDSLFLQQQQFSLQQQQQPQQQQQQQSFLH-QQQFQPQIQPQQQFQQQQPSPQFQQQQLSPQIQPQQQPSPQFQ
        MDFS GGNWSMIPNIPNL+NSSNLSNQ+SL+LQQQQFSLQQQQ  QQQQQQQSF H QQQFQPQIQ QQQFQQQQ SPQFQQQQ SPQIQPQQQPSPQFQ
Subjt:  MDFSGGGNWSMIPNIPNLTNSSNLSNQDSLFLQQQQFSLQQQQQPQQQQQQQSFLH-QQQFQPQIQPQQQFQQQQPSPQFQQQQLSPQIQPQQQPSPQFQ

Query:  QQLQPQHYPQQQQQQQQQQQQQQQQQYHFQQQQQQRLLQQQQQQQQQQQQQHQQQQQQQYHQHQSLASHFHLLHLVEKLADAIENGARDQQSDALVNDLN
        QQLQPQH+P   QQQQQQQQQQQQQQYHF         QQQQQQQQQQQQQ QQQQQQQYHQHQSLASHFHL HLVEKLAD IENGARDQQSDALVNDLN
Subjt:  QQLQPQHYPQQQQQQQQQQQQQQQQQYHFQQQQQQRLLQQQQQQQQQQQQQHQQQQQQQYHQHQSLASHFHLLHLVEKLADAIENGARDQQSDALVNDLN

Query:  NHFEKCQQLLNSISGSLSSKAMVYWNTVFFFLYAQTVEGQKKKLEEHEQLLNHRRYGDCHFLPLVFGKLSHSSMELIGKYKNSVEELVKGD
        NHFEKCQQLLNSISGSLSSKAM             TVEGQKKKLEEHEQLLNHRR                   ELIGKYKNSVEELVKG+
Subjt:  NHFEKCQQLLNSISGSLSSKAMVYWNTVFFFLYAQTVEGQKKKLEEHEQLLNHRRYGDCHFLPLVFGKLSHSSMELIGKYKNSVEELVKGD

XP_038903145.1 mediator of RNA polymerase II transcription subunit 9 [Benincasa hispida]1.6e-8379.54Show/hide
Query:  MDFSGGGNWSMIPNIPNLTNSSNLSNQDSLFLQQQQFSLQQQQQPQQQQQQQSFLH-QQQFQPQIQPQQQFQQQQPSPQFQQQQLSPQIQPQQQPSPQFQ
        MDFSGGGNWSMIPNIPNLTNSSNLSNQ+SLF   QQFSLQQQQQ Q QQQQQSF H QQQFQPQIQPQQQFQQQQPSPQFQQQQ SPQIQPQQQPSPQFQ
Subjt:  MDFSGGGNWSMIPNIPNLTNSSNLSNQDSLFLQQQQFSLQQQQQPQQQQQQQSFLH-QQQFQPQIQPQQQFQQQQPSPQFQQQQLSPQIQPQQQPSPQFQ

Query:  QQLQPQHYPQQQQQQQQQQQQ-----------QQQQQYHFQQQQQQRLLQQQQQQQQQQQQQHQQQQQQQYHQHQSLASHFHLLHLVEKLADAIENGARD
        QQLQPQH+PQQQQQQQQQQQ            QQQQQ   QQQQQQ+  QQQQQQQQQQQQQ QQQQQQQYHQHQSLASHFHLLHLVEKLADAIENG RD
Subjt:  QQLQPQHYPQQQQQQQQQQQQ-----------QQQQQYHFQQQQQQRLLQQQQQQQQQQQQQHQQQQQQQYHQHQSLASHFHLLHLVEKLADAIENGARD

Query:  QQSDALVNDLNNHFEKCQQLLNSISGSLSSKAMVYWNTVFFFLYAQTVEGQKKKLEEHEQLLNHRRYGDCHFLPLVFGKLSHSSMELIGKYKNSVEELVK
        QQSDALVNDLNNHFEKCQQLLNSISGSLSSKAM             TVEGQKKKLEEHEQLLNHRR                   ELIGKYKNSVEELVK
Subjt:  QQSDALVNDLNNHFEKCQQLLNSISGSLSSKAMVYWNTVFFFLYAQTVEGQKKKLEEHEQLLNHRRYGDCHFLPLVFGKLSHSSMELIGKYKNSVEELVK

Query:  GDP
        GDP
Subjt:  GDP

TrEMBL top hitse value%identityAlignment
A0A6J1D301 Mediator of RNA polymerase II transcription subunit 92.3e-7575.17Show/hide
Query:  MDFSGGGNWSMIPNIPNLTNSSNLSNQDSLFLQQQQFSLQQQQQPQQQQQQQSFLHQQQFQPQIQPQQQFQQQQPSPQFQQQQLSPQIQPQQQPSPQFQQ
        MDFSGGGNWSMIPNIP L+NSSNLSNQ+SL+LQQQQFSLQQQQ    Q        QQQFQPQ+QP QQFQQQQPSPQFQQQQ SPQIQP QQPSPQFQQ
Subjt:  MDFSGGGNWSMIPNIPNLTNSSNLSNQDSLFLQQQQFSLQQQQQPQQQQQQQSFLHQQQFQPQIQPQQQFQQQQPSPQFQQQQLSPQIQPQQQPSPQFQQ

Query:  QLQPQHYPQQQQQQQQQQQQQQQQQYHFQQQQQQRLLQQQQQQQQQQQQQHQQQQQQQYHQHQSLASHFHLLHLVEKLADAIENGARDQQSDALVNDLNN
        QLQPQH+P         QQQQQQQQYHFQQQQQQ+  QQ+  QQQQQQQQ QQQQQQQYHQHQSLASHFHL HLVEKLADAIENGARDQQSDALVNDLNN
Subjt:  QLQPQHYPQQQQQQQQQQQQQQQQQYHFQQQQQQRLLQQQQQQQQQQQQQHQQQQQQQYHQHQSLASHFHLLHLVEKLADAIENGARDQQSDALVNDLNN

Query:  HFEKCQQLLNSISGSLSSKAMVYWNTVFFFLYAQTVEGQKKKLEEHEQLLNHRRYGDCHFLPLVFGKLSHSSMELIGKYKNSVEELVKGD
        HFEKCQQLLNSISGSLSSKAM             TV+GQKKKLEEH+QLLNHRR                   ELIGKYKNSVEELVKGD
Subjt:  HFEKCQQLLNSISGSLSSKAMVYWNTVFFFLYAQTVEGQKKKLEEHEQLLNHRRYGDCHFLPLVFGKLSHSSMELIGKYKNSVEELVKGD

A0A6J1FZC2 mediator of RNA polymerase II transcription subunit 9-like3.2e-8278.01Show/hide
Query:  MDFSGGGNWSMIPNIPNLTNSSNLSNQDSLFLQQQQFSLQQQQQPQQQQQQQSFLH-QQQFQPQIQPQQQFQQQQPSPQFQQQQLSPQIQPQQQPSPQFQ
        MDFS GGNWSMIPNIPNL+NSSNLSNQ+SL+LQQQQFSLQQQQQ QQQQQQQSF H QQQFQPQIQ QQQFQQQQ SPQFQQQQ SPQ QPQQQPSPQFQ
Subjt:  MDFSGGGNWSMIPNIPNLTNSSNLSNQDSLFLQQQQFSLQQQQQPQQQQQQQSFLH-QQQFQPQIQPQQQFQQQQPSPQFQQQQLSPQIQPQQQPSPQFQ

Query:  QQLQPQHYPQQQQQQQQQQQQQQQQQYHFQQQQQQRLLQQQQQQQQQQQQQHQQQQQQQYHQHQSLASHFHLLHLVEKLADAIENGARDQQSDALVNDLN
        QQLQPQH+P     QQQQQQQQQQQQYHF           QQQQQQQQQQQ QQQQQQQYHQHQSLASHFHL HLVEKLAD IENGARDQQSDALVNDLN
Subjt:  QQLQPQHYPQQQQQQQQQQQQQQQQQYHFQQQQQQRLLQQQQQQQQQQQQQHQQQQQQQYHQHQSLASHFHLLHLVEKLADAIENGARDQQSDALVNDLN

Query:  NHFEKCQQLLNSISGSLSSKAMVYWNTVFFFLYAQTVEGQKKKLEEHEQLLNHRRYGDCHFLPLVFGKLSHSSMELIGKYKNSVEELVKGD
        NHFEKCQQLLNSISGSLSSKAM             TVEGQKKKLEEHEQLLNHRR                   ELIGKYKNSVEELVKG+
Subjt:  NHFEKCQQLLNSISGSLSSKAMVYWNTVFFFLYAQTVEGQKKKLEEHEQLLNHRRYGDCHFLPLVFGKLSHSSMELIGKYKNSVEELVKGD

A0A6J1GCY0 mediator of RNA polymerase II transcription subunit 9-like2.7e-7675Show/hide
Query:  MDFSGGGNWSMIPNIPNLTNSSNLSNQDSLFLQQQQFSLQQQQQPQQQQQQQSFLHQ-QQFQPQIQPQQQFQQQQPSPQFQQQQLSPQIQPQQQPSPQFQ
        MDFSGGGNWSMIPNIP L+NSSNLSNQ+SL+LQQQQFSLQQQQ  QQQQQQ SF HQ QQFQPQIQPQQQFQQQQ SPQFQQ Q SPQIQPQQQ S QFQ
Subjt:  MDFSGGGNWSMIPNIPNLTNSSNLSNQDSLFLQQQQFSLQQQQQPQQQQQQQSFLHQ-QQFQPQIQPQQQFQQQQPSPQFQQQQLSPQIQPQQQPSPQFQ

Query:  QQLQPQHYPQQQQQQQQQQQQQQQQQYHFQQQQQQRLLQQQQQQQQQQQQQHQQQQQQQYHQHQSLASHFHLLHLVEKLADAIENGARDQQSDALVNDLN
        QQ+QPQH+P     QQQQQQQQQQQQYHF QQQQQRLLQQQQ          QQQ+QQQYHQHQSLASHFHL HLVEKLADAIE G RDQQSDALVNDLN
Subjt:  QQLQPQHYPQQQQQQQQQQQQQQQQQYHFQQQQQQRLLQQQQQQQQQQQQQHQQQQQQQYHQHQSLASHFHLLHLVEKLADAIENGARDQQSDALVNDLN

Query:  NHFEKCQQLLNSISGSLSSKAMVYWNTVFFFLYAQTVEGQKKKLEEHEQLLNHRRYGDCHFLPLVFGKLSHSSMELIGKYKNSVEELVKGDP
        NHFEKCQQLLNSISGSLSSKAM             TVEGQKKKLEEHEQLL++RR                   ELIGKYK+SVEEL KG+P
Subjt:  NHFEKCQQLLNSISGSLSSKAMVYWNTVFFFLYAQTVEGQKKKLEEHEQLLNHRRYGDCHFLPLVFGKLSHSSMELIGKYKNSVEELVKGDP

A0A6J1HX54 Mediator of RNA polymerase II transcription subunit 93.5e-6867.22Show/hide
Query:  MDFSGGGNWSMIPNIPNL---------TNSSNLSNQDSLFLQQQQFSLQQQQQPQQQQQQQSFLHQQQFQPQIQPQQQFQQQQPSPQFQQQQLSPQIQPQ
        MDFS GGNWSMIPNIPNL         +NSSNLSNQ+SL+LQQQQFSLQQQQ  QQQQQQ     QQQFQPQIQ QQQFQQQQ SPQFQ          Q
Subjt:  MDFSGGGNWSMIPNIPNL---------TNSSNLSNQDSLFLQQQQFSLQQQQQPQQQQQQQSFLHQQQFQPQIQPQQQFQQQQPSPQFQQQQLSPQIQPQ

Query:  QQPSPQFQQQLQPQHYPQQQQQQQQQQQQQQQQQYHFQQQQQQRLLQQQQQQQQQQQQQHQQQQQQQYHQHQSLASHFHLLHLVEKLADAIENGARDQQS
        QQPSPQFQQQLQPQH+P        QQQQQQQQQYHFQ                      QQQQQQQYHQHQSLASHFHL HLVEKLAD IENGARDQQS
Subjt:  QQPSPQFQQQLQPQHYPQQQQQQQQQQQQQQQQQYHFQQQQQQRLLQQQQQQQQQQQQQHQQQQQQQYHQHQSLASHFHLLHLVEKLADAIENGARDQQS

Query:  DALVNDLNNHFEKCQQLLNSISGSLSSKAMVYWNTVFFFLYAQTVEGQKKKLEEHEQLLNHRRYGDCHFLPLVFGKLSHSSMELIGKYKNSVEELVKGD
        DALVNDLNNHFEKCQQLLNSISGSLSSKAM             TVEGQKKKLEEHEQLLNHRR                   ELIGKYKNSVEELVKG+
Subjt:  DALVNDLNNHFEKCQQLLNSISGSLSSKAMVYWNTVFFFLYAQTVEGQKKKLEEHEQLLNHRRYGDCHFLPLVFGKLSHSSMELIGKYKNSVEELVKGD

A0A6J1K651 mediator of RNA polymerase II transcription subunit 9-like2.8e-7875Show/hide
Query:  MDFSGGGNWSMIPNIPNLTNSSNLSNQDSLFLQQQQFSLQQQQQPQQQQQQQSFLHQ-QQFQPQIQPQQQFQQQQPSPQFQQQQLSPQIQPQQQPSPQFQ
        MDFSGGGNWSMIPNIP L+NSSNLSNQ+SL+LQQQQFSLQQQQQ QQQQQQ SF HQ QQFQPQIQPQQQFQQQQ SPQFQQ Q SPQIQPQQQ S QFQ
Subjt:  MDFSGGGNWSMIPNIPNLTNSSNLSNQDSLFLQQQQFSLQQQQQPQQQQQQQSFLHQ-QQFQPQIQPQQQFQQQQPSPQFQQQQLSPQIQPQQQPSPQFQ

Query:  QQLQPQHYPQQQQQQQQQQQQQQQQQYHFQQQQQQRLLQQQQQQQQQQQQQHQQQQQQQYHQHQSLASHFHLLHLVEKLADAIENGARDQQSDALVNDLN
        QQ+QPQH+P       QQQQQQQQQQYHF QQQQQRLLQQQQ          QQQ+QQQYHQHQSLASHFHL HLVEKLADAIE G RDQQSDALVNDLN
Subjt:  QQLQPQHYPQQQQQQQQQQQQQQQQQYHFQQQQQQRLLQQQQQQQQQQQQQHQQQQQQQYHQHQSLASHFHLLHLVEKLADAIENGARDQQSDALVNDLN

Query:  NHFEKCQQLLNSISGSLSSKAMVYWNTVFFFLYAQTVEGQKKKLEEHEQLLNHRRYGDCHFLPLVFGKLSHSSMELIGKYKNSVEELVKGDP
        NHFEKCQQLLNSISGSLSSKAM             TVEGQKKKLEEHEQLL++RR                   ELIGKYK+SVEELVKG+P
Subjt:  NHFEKCQQLLNSISGSLSSKAMVYWNTVFFFLYAQTVEGQKKKLEEHEQLLNHRRYGDCHFLPLVFGKLSHSSMELIGKYKNSVEELVKGDP

SwissProt top hitse value%identityAlignment
Q8RWA2 Mediator of RNA polymerase II transcription subunit 99.0e-2149.14Show/hide
Query:  GGGNWSMIPNIPNLTNSSNLSNQDSLFLQQQQFSLQQQQQPQQQQQQQSFLHQQQFQPQIQPQQQFQQQQPSPQFQQQQLSPQIQPQQQPSPQFQQQLQP
        GGGNWSMIPN+    N    +N D      QQ  LQQQQ  QQQQQQQ    QQQF   +Q QQQ QQ       QQQQ  PQ Q + Q   QFQQQ   
Subjt:  GGGNWSMIPNIPNLTNSSNLSNQDSLFLQQQQFSLQQQQQPQQQQQQQSFLHQQQFQPQIQPQQQFQQQQPSPQFQQQQLSPQIQPQQQPSPQFQQQLQP

Query:  QHYPQQQQQQQQQQQQQQQQQYHFQQQQQQRLLQQQQQQQQQQQQQHQQQQQQQY--------HQHQSLASHFHLLHLVEKLADAIENGARDQQSDALVN
        QH+ QQQQ QQQQ+  Q       Q Q  Q    QQ      Q   H  QQQQQ          QHQSLASHFHL  +VEKLAD IENG RDQ SDALVN
Subjt:  QHYPQQQQQQQQQQQQQQQQQYHFQQQQQQRLLQQQQQQQQQQQQQHQQQQQQQY--------HQHQSLASHFHLLHLVEKLADAIENGARDQQSDALVN

Query:  DLNNHFEKCQQLLNSISGSLSSKAMVYWNTVFFFLYAQTVEGQKKKLEEHEQLLNHRRYGDCHFLPLVFGKLSHSSMELIGKYKNSVEELV
        +LN+HF+KCQQLLNSISGSL SK M             TV+GQK+ +EE EQLL  RR                   +LI +Y+ S+EE+V
Subjt:  DLNNHFEKCQQLLNSISGSLSSKAMVYWNTVFFFLYAQTVEGQKKKLEEHEQLLNHRRYGDCHFLPLVFGKLSHSSMELIGKYKNSVEELV

Arabidopsis top hitse value%identityAlignment
AT1G55080.1 MED96.4e-2249.14Show/hide
Query:  GGGNWSMIPNIPNLTNSSNLSNQDSLFLQQQQFSLQQQQQPQQQQQQQSFLHQQQFQPQIQPQQQFQQQQPSPQFQQQQLSPQIQPQQQPSPQFQQQLQP
        GGGNWSMIPN+    N    +N D      QQ  LQQQQ  QQQQQQQ    QQQF   +Q QQQ QQ       QQQQ  PQ Q + Q   QFQQQ   
Subjt:  GGGNWSMIPNIPNLTNSSNLSNQDSLFLQQQQFSLQQQQQPQQQQQQQSFLHQQQFQPQIQPQQQFQQQQPSPQFQQQQLSPQIQPQQQPSPQFQQQLQP

Query:  QHYPQQQQQQQQQQQQQQQQQYHFQQQQQQRLLQQQQQQQQQQQQQHQQQQQQQY--------HQHQSLASHFHLLHLVEKLADAIENGARDQQSDALVN
        QH+ QQQQ QQQQ+  Q       Q Q  Q    QQ      Q   H  QQQQQ          QHQSLASHFHL  +VEKLAD IENG RDQ SDALVN
Subjt:  QHYPQQQQQQQQQQQQQQQQQYHFQQQQQQRLLQQQQQQQQQQQQQHQQQQQQQY--------HQHQSLASHFHLLHLVEKLADAIENGARDQQSDALVN

Query:  DLNNHFEKCQQLLNSISGSLSSKAMVYWNTVFFFLYAQTVEGQKKKLEEHEQLLNHRRYGDCHFLPLVFGKLSHSSMELIGKYKNSVEELV
        +LN+HF+KCQQLLNSISGSL SK M             TV+GQK+ +EE EQLL  RR                   +LI +Y+ S+EE+V
Subjt:  DLNNHFEKCQQLLNSISGSLSSKAMVYWNTVFFFLYAQTVEGQKKKLEEHEQLLNHRRYGDCHFLPLVFGKLSHSSMELIGKYKNSVEELV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGTCTGTTTTACTAAGAAGAAAACAAATCAGCAATATGGATTTCTCTGGAGGAGGAAACTGGAGTATGATCCCCAACATCCCTAATCTCACCAACTCCTCTAATCT
TTCCAATCAAGATTCCCTCTTCCTCCAACAGCAACAATTTTCCCTTCAACAACAACAACAGCCGCAGCAGCAGCAGCAGCAGCAATCCTTTCTCCACCAACAGCAATTTC
AGCCCCAAATTCAACCCCAACAGCAATTCCAGCAGCAGCAGCCCTCTCCTCAATTTCAACAGCAACAACTCTCCCCCCAAATCCAGCCCCAACAACAACCCTCCCCCCAA
TTTCAACAGCAATTGCAACCCCAACATTACCCCCAGCAGCAGCAGCAGCAACAGCAGCAGCAACAACAACAACAGCAGCAGCAATACCATTTTCAACAACAACAGCAGCA
GCGGCTTCTTCAACAGCAACAGCAACAACAGCAGCAGCAGCAGCAGCAGCACCAACAACAGCAACAACAGCAATATCATCAACACCAATCTCTGGCTTCCCATTTTCATC
TACTTCATCTTGTGGAGAAATTAGCGGATGCGATCGAGAATGGAGCTAGAGATCAGCAGTCTGATGCATTGGTCAATGATCTGAATAACCACTTTGAGAAGTGCCAGCAA
CTGTTGAACTCGATATCTGGATCACTCAGTTCGAAGGCTATGGTATATTGGAACACTGTTTTCTTTTTCCTGTATGCACAGACAGTTGAGGGACAGAAGAAAAAGCTGGA
AGAACATGAGCAGTTGTTAAATCATCGAAGGTATGGTGATTGCCATTTTCTGCCTCTGGTTTTCGGTAAATTATCTCATTCATCAATGGAACTGATTGGAAAATATAAGA
ACTCTGTTGAAGAGCTTGTCAAGGGCGATCCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGGTCTGTTTTACTAAGAAGAAAACAAATCAGCAATATGGATTTCTCTGGAGGAGGAAACTGGAGTATGATCCCCAACATCCCTAATCTCACCAACTCCTCTAATCT
TTCCAATCAAGATTCCCTCTTCCTCCAACAGCAACAATTTTCCCTTCAACAACAACAACAGCCGCAGCAGCAGCAGCAGCAGCAATCCTTTCTCCACCAACAGCAATTTC
AGCCCCAAATTCAACCCCAACAGCAATTCCAGCAGCAGCAGCCCTCTCCTCAATTTCAACAGCAACAACTCTCCCCCCAAATCCAGCCCCAACAACAACCCTCCCCCCAA
TTTCAACAGCAATTGCAACCCCAACATTACCCCCAGCAGCAGCAGCAGCAACAGCAGCAGCAACAACAACAACAGCAGCAGCAATACCATTTTCAACAACAACAGCAGCA
GCGGCTTCTTCAACAGCAACAGCAACAACAGCAGCAGCAGCAGCAGCAGCACCAACAACAGCAACAACAGCAATATCATCAACACCAATCTCTGGCTTCCCATTTTCATC
TACTTCATCTTGTGGAGAAATTAGCGGATGCGATCGAGAATGGAGCTAGAGATCAGCAGTCTGATGCATTGGTCAATGATCTGAATAACCACTTTGAGAAGTGCCAGCAA
CTGTTGAACTCGATATCTGGATCACTCAGTTCGAAGGCTATGGTATATTGGAACACTGTTTTCTTTTTCCTGTATGCACAGACAGTTGAGGGACAGAAGAAAAAGCTGGA
AGAACATGAGCAGTTGTTAAATCATCGAAGGTATGGTGATTGCCATTTTCTGCCTCTGGTTTTCGGTAAATTATCTCATTCATCAATGGAACTGATTGGAAAATATAAGA
ACTCTGTTGAAGAGCTTGTCAAGGGCGATCCTTAG
Protein sequenceShow/hide protein sequence
MRSVLLRRKQISNMDFSGGGNWSMIPNIPNLTNSSNLSNQDSLFLQQQQFSLQQQQQPQQQQQQQSFLHQQQFQPQIQPQQQFQQQQPSPQFQQQQLSPQIQPQQQPSPQ
FQQQLQPQHYPQQQQQQQQQQQQQQQQQYHFQQQQQQRLLQQQQQQQQQQQQQHQQQQQQQYHQHQSLASHFHLLHLVEKLADAIENGARDQQSDALVNDLNNHFEKCQQ
LLNSISGSLSSKAMVYWNTVFFFLYAQTVEGQKKKLEEHEQLLNHRRYGDCHFLPLVFGKLSHSSMELIGKYKNSVEELVKGDP