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Lsi07G005760 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G005760
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionBeta-galactosidase
Genome locationchr07:6103274..6108128
RNA-Seq ExpressionLsi07G005760
SyntenyLsi07G005760
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0005773 - vacuole (cellular component)
GO:0048046 - apoplast (cellular component)
GO:0004565 - beta-galactosidase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036665.1 beta-galactosidase 17 isoform X2 [Cucumis melo var. makuwa]1.8e-1575.41Show/hide
Query:  MAKRRHLRPSLFFLLLVFLTVFGVIVPVFALLPSLHSHPQGLFRHHHDHTKVKKVYISREE
        MAKRRHL PS FFLLL+FLTV GVIVPVFALLPSLHSH QGLFRHHHD +   KV+  + E
Subjt:  MAKRRHLRPSLFFLLLVFLTVFGVIVPVFALLPSLHSHPQGLFRHHHDHTKVKKVYISREE

XP_008464017.1 PREDICTED: beta-galactosidase 17 isoform X2 [Cucumis melo]8.7e-1877.27Show/hide
Query:  SKLSSMAKRRHLRPSLFFLLLVFLTVFGVIVPVFALLPSLHSHPQGLFRHHHDHTKVKKVYISREE
        SKLSSMAKRRHL PS FFLLL+FLTV GVIVPVFALLPSLHSH QGLFRHHHD +   KV+  + E
Subjt:  SKLSSMAKRRHLRPSLFFLLLVFLTVFGVIVPVFALLPSLHSHPQGLFRHHHDHTKVKKVYISREE

XP_011652351.1 beta-galactosidase 17 [Cucumis sativus]3.7e-1674.24Show/hide
Query:  SKLSSMAKRRHLRPSLFFLLLVFLTVFGVIVPVFALLPSLHSHPQGLFRHHHDHTKVKKVYISREE
        SKLSSMAKRRHL PSLFFLLL+FLTV GVIVPVFALLPSLHSH   LFRHHH  +   KV+  + E
Subjt:  SKLSSMAKRRHLRPSLFFLLLVFLTVFGVIVPVFALLPSLHSHPQGLFRHHHDHTKVKKVYISREE

XP_016903128.1 PREDICTED: beta-galactosidase 17 isoform X1 [Cucumis melo]8.7e-1877.27Show/hide
Query:  SKLSSMAKRRHLRPSLFFLLLVFLTVFGVIVPVFALLPSLHSHPQGLFRHHHDHTKVKKVYISREE
        SKLSSMAKRRHL PS FFLLL+FLTV GVIVPVFALLPSLHSH QGLFRHHHD +   KV+  + E
Subjt:  SKLSSMAKRRHLRPSLFFLLLVFLTVFGVIVPVFALLPSLHSHPQGLFRHHHDHTKVKKVYISREE

XP_038875608.1 beta-galactosidase 17 [Benincasa hispida]3.5e-1980.3Show/hide
Query:  SKLSSMAKRRHLRPSLFFLLLVFLTVFGVIVPVFALLPSLHSHPQGLFRHHHDHTKVKKVYISREE
        SKLSSMAKRRHLRPSLFFLLL+FLTVFGVIVPVFALLPSL+SH  GLFRHHH H+  KKV+  + E
Subjt:  SKLSSMAKRRHLRPSLFFLLLVFLTVFGVIVPVFALLPSLHSHPQGLFRHHHDHTKVKKVYISREE

TrEMBL top hitse value%identityAlignment
A0A0A0LGB2 Beta-galactosidase1.8e-1674.24Show/hide
Query:  SKLSSMAKRRHLRPSLFFLLLVFLTVFGVIVPVFALLPSLHSHPQGLFRHHHDHTKVKKVYISREE
        SKLSSMAKRRHL PSLFFLLL+FLTV GVIVPVFALLPSLHSH   LFRHHH  +   KV+  + E
Subjt:  SKLSSMAKRRHLRPSLFFLLLVFLTVFGVIVPVFALLPSLHSHPQGLFRHHHDHTKVKKVYISREE

A0A1S3CKJ1 Beta-galactosidase4.2e-1877.27Show/hide
Query:  SKLSSMAKRRHLRPSLFFLLLVFLTVFGVIVPVFALLPSLHSHPQGLFRHHHDHTKVKKVYISREE
        SKLSSMAKRRHL PS FFLLL+FLTV GVIVPVFALLPSLHSH QGLFRHHHD +   KV+  + E
Subjt:  SKLSSMAKRRHLRPSLFFLLLVFLTVFGVIVPVFALLPSLHSHPQGLFRHHHDHTKVKKVYISREE

A0A1S4E4G8 Beta-galactosidase4.2e-1877.27Show/hide
Query:  SKLSSMAKRRHLRPSLFFLLLVFLTVFGVIVPVFALLPSLHSHPQGLFRHHHDHTKVKKVYISREE
        SKLSSMAKRRHL PS FFLLL+FLTV GVIVPVFALLPSLHSH QGLFRHHHD +   KV+  + E
Subjt:  SKLSSMAKRRHLRPSLFFLLLVFLTVFGVIVPVFALLPSLHSHPQGLFRHHHDHTKVKKVYISREE

A0A5D3E3M2 Beta-galactosidase8.8e-1675.41Show/hide
Query:  MAKRRHLRPSLFFLLLVFLTVFGVIVPVFALLPSLHSHPQGLFRHHHDHTKVKKVYISREE
        MAKRRHL PS FFLLL+FLTV GVIVPVFALLPSLHSH QGLFRHHHD +   KV+  + E
Subjt:  MAKRRHLRPSLFFLLLVFLTVFGVIVPVFALLPSLHSHPQGLFRHHHDHTKVKKVYISREE

A0A6J1G1M6 Beta-galactosidase4.4e-1571.21Show/hide
Query:  SKLSSMAKRRHLRPSLFFLLLVFLTVFGVIVPVFALLPSLHSHPQGLFRHHHDHTKVKKVYISREE
        SKLS+MAKRRH+R SL FLLL+ LT FGVIVPVFALLPSL+SH   LFRHH DH+K+KKV   + E
Subjt:  SKLSSMAKRRHLRPSLFFLLLVFLTVFGVIVPVFALLPSLHSHPQGLFRHHHDHTKVKKVYISREE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTTCGAAGCTTTCATCCATGGCAAAGAGACGACACCTGAGACCTTCTCTCTTCTTCCTCCTCCTCGTCTTCCTTACAGTTTTTGGAGTGATCGTTCCAGTGTTTGC
TCTTCTTCCTTCACTGCATTCTCACCCCCAGGGTCTCTTCCGTCATCACCATGATCATACCAAGGTCAAGAAGGTTTACATTTCCAGGGAGGAGGCCACATTATATGAGG
ACGACGTTTCCTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGATTTCGAAGCTTTCATCCATGGCAAAGAGACGACACCTGAGACCTTCTCTCTTCTTCCTCCTCCTCGTCTTCCTTACAGTTTTTGGAGTGATCGTTCCAGTGTTTGC
TCTTCTTCCTTCACTGCATTCTCACCCCCAGGGTCTCTTCCGTCATCACCATGATCATACCAAGGTCAAGAAGGTTTACATTTCCAGGGAGGAGGCCACATTATATGAGG
ACGACGTTTCCTCTTGA
Protein sequenceShow/hide protein sequence
MISKLSSMAKRRHLRPSLFFLLLVFLTVFGVIVPVFALLPSLHSHPQGLFRHHHDHTKVKKVYISREEATLYEDDVSS