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Lsi07G005810 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G005810
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionglyoxylate/succinic semialdehyde reductase 2, chloroplastic-like
Genome locationchr07:6183738..6186786
RNA-Seq ExpressionLsi07G005810
SyntenyLsi07G005810
Gene Ontology termsGO:0009507 - chloroplast (cellular component)
GO:0030267 - glyoxylate reductase (NADP) activity (molecular function)
GO:0050661 - NADP binding (molecular function)
GO:0051287 - NAD binding (molecular function)
InterPro domainsIPR002204 - 3-hydroxyisobutyrate dehydrogenase-related, conserved site
IPR006115 - 6-phosphogluconate dehydrogenase, NADP-binding
IPR036291 - NAD(P)-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7036428.1 Glyoxylate/succinic semialdehyde reductase 2, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]1.5e-3182.02Show/hide
Query:  AVLSSNPSLSFFDDLRLVAQRKDINSNMSNLGSSLPDATAAAGKLRVGFLGLGIMGSPMAQNLIKSGYDVTVWNRTKSKCDPLINLGAK
        AV+S N SL+  DDLRLVAQ+   NS+MS+ G S+PDATAA GKLRVGFLGLGIMGSPMAQNLIKSGYDVTVWNRTKSKCDPLINLGAK
Subjt:  AVLSSNPSLSFFDDLRLVAQRKDINSNMSNLGSSLPDATAAAGKLRVGFLGLGIMGSPMAQNLIKSGYDVTVWNRTKSKCDPLINLGAK

XP_008447637.1 PREDICTED: glyoxylate/succinic semialdehyde reductase 2, chloroplastic-like [Cucumis melo]3.0e-2495.16Show/hide
Query:  MSNLGSSLPDATAAAGKLRVGFLGLGIMGSPMAQNLIKSGYDVTVWNRTKSKCDPLINLGAK
        MSNLGSSLPDATAAA KLR+GF+GLGIMGSPMAQNLIKSGYDVTVWNRTKSKCDPLINLGAK
Subjt:  MSNLGSSLPDATAAAGKLRVGFLGLGIMGSPMAQNLIKSGYDVTVWNRTKSKCDPLINLGAK

XP_022152715.1 glyoxylate/succinic semialdehyde reductase 2, chloroplastic-like [Momordica charantia]3.6e-2598.39Show/hide
Query:  MSNLGSSLPDATAAAGKLRVGFLGLGIMGSPMAQNLIKSGYDVTVWNRTKSKCDPLINLGAK
        MSNLGSSLPDATAAAGKLRVGFLGLGIMGSPMAQNLIKSGYDVTVWNRT+SKCDPLINLGAK
Subjt:  MSNLGSSLPDATAAAGKLRVGFLGLGIMGSPMAQNLIKSGYDVTVWNRTKSKCDPLINLGAK

XP_023526094.1 glyoxylate/succinic semialdehyde reductase 2, chloroplastic-like [Cucurbita pepo subsp. pepo]3.0e-2495.16Show/hide
Query:  MSNLGSSLPDATAAAGKLRVGFLGLGIMGSPMAQNLIKSGYDVTVWNRTKSKCDPLINLGAK
        MSNLGSSLPDATAAA KLRVGFLGLGIMGSPMA+NL+KSGYDVTVWNRTKSKCDPLINLGAK
Subjt:  MSNLGSSLPDATAAAGKLRVGFLGLGIMGSPMAQNLIKSGYDVTVWNRTKSKCDPLINLGAK

XP_038895662.1 glyoxylate/succinic semialdehyde reductase 2, chloroplastic-like isoform X1 [Benincasa hispida]4.0e-2496.77Show/hide
Query:  MSNLGSSLPDATAAAGKLRVGFLGLGIMGSPMAQNLIKSGYDVTVWNRTKSKCDPLINLGAK
        MSNLGSS+ DATAAAGKLRVGFLGLGIMGSPMAQNLIKSGYDVTVWNRTKSKCDPLINLGAK
Subjt:  MSNLGSSLPDATAAAGKLRVGFLGLGIMGSPMAQNLIKSGYDVTVWNRTKSKCDPLINLGAK

TrEMBL top hitse value%identityAlignment
A0A0A0LID2 Uncharacterized protein5.6e-2495.16Show/hide
Query:  MSNLGSSLPDATAAAGKLRVGFLGLGIMGSPMAQNLIKSGYDVTVWNRTKSKCDPLINLGAK
        MSNLGSSLPDATAAA  LRVGF+GLGIMGSPMAQNLIKSGYDVTVWNRTKSKCDPLINLGAK
Subjt:  MSNLGSSLPDATAAAGKLRVGFLGLGIMGSPMAQNLIKSGYDVTVWNRTKSKCDPLINLGAK

A0A1S3BHW8 glyoxylate/succinic semialdehyde reductase 2, chloroplastic-like1.5e-2495.16Show/hide
Query:  MSNLGSSLPDATAAAGKLRVGFLGLGIMGSPMAQNLIKSGYDVTVWNRTKSKCDPLINLGAK
        MSNLGSSLPDATAAA KLR+GF+GLGIMGSPMAQNLIKSGYDVTVWNRTKSKCDPLINLGAK
Subjt:  MSNLGSSLPDATAAAGKLRVGFLGLGIMGSPMAQNLIKSGYDVTVWNRTKSKCDPLINLGAK

A0A6J1DEQ9 glyoxylate/succinic semialdehyde reductase 2, chloroplastic-like1.7e-2598.39Show/hide
Query:  MSNLGSSLPDATAAAGKLRVGFLGLGIMGSPMAQNLIKSGYDVTVWNRTKSKCDPLINLGAK
        MSNLGSSLPDATAAAGKLRVGFLGLGIMGSPMAQNLIKSGYDVTVWNRT+SKCDPLINLGAK
Subjt:  MSNLGSSLPDATAAAGKLRVGFLGLGIMGSPMAQNLIKSGYDVTVWNRTKSKCDPLINLGAK

A0A6J1GXH6 glyoxylate/succinic semialdehyde reductase 2, chloroplastic-like7.3e-2493.55Show/hide
Query:  MSNLGSSLPDATAAAGKLRVGFLGLGIMGSPMAQNLIKSGYDVTVWNRTKSKCDPLINLGAK
        MSNLGSSLPDATAA  KLRVGFLGLGIMGSPMA+NL+KSGYDVTVWNRTKSKCDPLINLGAK
Subjt:  MSNLGSSLPDATAAAGKLRVGFLGLGIMGSPMAQNLIKSGYDVTVWNRTKSKCDPLINLGAK

A0A6J1J003 glyoxylate/succinic semialdehyde reductase 2, chloroplastic-like9.5e-2493.55Show/hide
Query:  MSNLGSSLPDATAAAGKLRVGFLGLGIMGSPMAQNLIKSGYDVTVWNRTKSKCDPLINLGAK
        MSNL SSLPDATAAA KLRVGFLGLGIMGSPMA+NL+KSGYDVTVWNRTKSKCDPLINLGAK
Subjt:  MSNLGSSLPDATAAAGKLRVGFLGLGIMGSPMAQNLIKSGYDVTVWNRTKSKCDPLINLGAK

SwissProt top hitse value%identityAlignment
F4I907 Glyoxylate/succinic semialdehyde reductase 2, chloroplastic1.7e-1768.85Show/hide
Query:  SNLGSSLPDATAAAGKLRVGFLGLGIMGSPMAQNLIKSGYDVTVWNRTKSKCDPLINLGAK
        S+L S+ P      G + +GFLG+GIMGSPMAQNLIK+G DVTVWNRTKSKCDPL+ LGAK
Subjt:  SNLGSSLPDATAAAGKLRVGFLGLGIMGSPMAQNLIKSGYDVTVWNRTKSKCDPLINLGAK

Q49A26 Putative oxidoreductase GLYR11.7e-0950.85Show/hide
Query:  DATAAAGKL-----RVGFLGLGIMGSPMAQNLIKSGYDVTVWNRTKSKCDPLINLGAKI
        D+TA  G +     ++GFLGLG+MGS +  NL+K G+ VTVWNRT  KCD  I  GA++
Subjt:  DATAAAGKL-----RVGFLGLGIMGSPMAQNLIKSGYDVTVWNRTKSKCDPLINLGAKI

Q5RKN4 Putative oxidoreductase GLYR11.7e-0944.59Show/hide
Query:  KDINSNMSNLGSSLPDATAAAGKL-----RVGFLGLGIMGSPMAQNLIKSGYDVTVWNRTKSKCDPLINLGAKI
        K I  +  +      D+TA  G +     R+GFLGLG+MGS +  NL+K G+ VTVWNRT  KCD  I  GA++
Subjt:  KDINSNMSNLGSSLPDATAAAGKL-----RVGFLGLGIMGSPMAQNLIKSGYDVTVWNRTKSKCDPLINLGAKI

Q5ZLS7 Putative oxidoreductase GLYR11.7e-0950.85Show/hide
Query:  DATAAAGKL-----RVGFLGLGIMGSPMAQNLIKSGYDVTVWNRTKSKCDPLINLGAKI
        D+TA  G +     ++GFLGLG+MGS +  NL+K G+ VTVWNRT  KCD  I  GA++
Subjt:  DATAAAGKL-----RVGFLGLGIMGSPMAQNLIKSGYDVTVWNRTKSKCDPLINLGAKI

Q9LSV0 Glyoxylate/succinic semialdehyde reductase 11.5e-1063.04Show/hide
Query:  LRVGFLGLGIMGSPMAQNLIKSGYDVTVWNRTKSKCDPLINLGAKI
        + VGFLGLGIMG  M+ NL+K+G+ VTVWNRT SKCD L+  GA +
Subjt:  LRVGFLGLGIMGSPMAQNLIKSGYDVTVWNRTKSKCDPLINLGAKI

Arabidopsis top hitse value%identityAlignment
AT1G17650.1 glyoxylate reductase 21.2e-1868.85Show/hide
Query:  SNLGSSLPDATAAAGKLRVGFLGLGIMGSPMAQNLIKSGYDVTVWNRTKSKCDPLINLGAK
        S+L S+ P      G + +GFLG+GIMGSPMAQNLIK+G DVTVWNRTKSKCDPL+ LGAK
Subjt:  SNLGSSLPDATAAAGKLRVGFLGLGIMGSPMAQNLIKSGYDVTVWNRTKSKCDPLINLGAK

AT1G71180.1 6-phosphogluconate dehydrogenase family protein1.2e-0546.81Show/hide
Query:  KLRVGFLGLGIMGSPMAQNLIKSGYDVTVWNRTKSKCDPLINLGAKI
        K R+G++G+GIMGS M  ++I +GY VTV+ R   K   L   GA+I
Subjt:  KLRVGFLGLGIMGSPMAQNLIKSGYDVTVWNRTKSKCDPLINLGAKI

AT3G25530.1 glyoxylate reductase 11.1e-1163.04Show/hide
Query:  LRVGFLGLGIMGSPMAQNLIKSGYDVTVWNRTKSKCDPLINLGAKI
        + VGFLGLGIMG  M+ NL+K+G+ VTVWNRT SKCD L+  GA +
Subjt:  LRVGFLGLGIMGSPMAQNLIKSGYDVTVWNRTKSKCDPLINLGAKI

AT3G25530.2 glyoxylate reductase 11.1e-1163.04Show/hide
Query:  LRVGFLGLGIMGSPMAQNLIKSGYDVTVWNRTKSKCDPLINLGAKI
        + VGFLGLGIMG  M+ NL+K+G+ VTVWNRT SKCD L+  GA +
Subjt:  LRVGFLGLGIMGSPMAQNLIKSGYDVTVWNRTKSKCDPLINLGAKI

AT4G29120.1 6-phosphogluconate dehydrogenase family protein1.6e-0740.32Show/hide
Query:  SNLGSSLPDATAAAGKLRVGFLGLGIMGSPMAQNLIKSGYDVTVWNRTKSKCDPLINLGAKI
        S   S++          ++G++G G+MG  M  +LIK+GY VTV+NRT SK   LI++GA +
Subjt:  SNLGSSLPDATAAAGKLRVGFLGLGIMGSPMAQNLIKSGYDVTVWNRTKSKCDPLINLGAKI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGTCCCACATTCTCTTGTTTCGTTTCAAACTAGAGTGCTTTGGAGGAGGAGCGGAGGATGCAACGCCGTCGTTTTAGTTGTTCTCTTCGAAAAAGTTCCAATTCC
ACTGAAATTGGAACCTAAACCACTAAACGACGTCGTATCAGGCCCTTTAATGGCCCACCAATTGGCTTTCCCTCGCCAATCAAATGCTCTCTCTTTTCACAGCTTTTTCT
GTCATTACGCTGATCGCAGTCGCGCGGTTCTCTCGTCCAATCCTTCGCTTTCCTTTTTCGACGATCTTCGTCTTGTAGCTCAGCGTAAAGACATCAACTCCAATATGTCA
AATCTTGGCTCCTCTCTTCCGGATGCGACTGCAGCCGCCGGAAAGTTGCGCGTTGGCTTCCTAGGTCTTGGAATCATGGGTTCACCAATGGCACAGAATCTTATAAAATC
TGGATATGATGTGACAGTCTGGAATAGGACCAAGAGCAAATGCGATCCTCTTATCAACTTGGGTGCAAAGATTTATGCTAGGAAAATTGACCAGAGAAATTTTATCCTCA
GGATACATGATATGATC
mRNA sequenceShow/hide mRNA sequence
TCTAATGGAGGTCCCACATTCTCTTGTTTCGTTTCAAACTAGAGTGCTTTGGAGGAGGAGCGGAGGATGCAACGCCGTCGTTTTAGTTGTTCTCTTCGAAAAAGTTCCAA
TTCCACTGAAATTGGAACCTAAACCACTAAACGACGTCGTATCAGGCCCTTTAATGGCCCACCAATTGGCTTTCCCTCGCCAATCAAATGCTCTCTCTTTTCACAGCTTT
TTCTGTCATTACGCTGATCGCAGTCGCGCGGTTCTCTCGTCCAATCCTTCGCTTTCCTTTTTCGACGATCTTCGTCTTGTAGCTCAGCGTAAAGACATCAACTCCAATAT
GTCAAATCTTGGCTCCTCTCTTCCGGATGCGACTGCAGCCGCCGGAAAGTTGCGCGTTGGCTTCCTAGGTCTTGGAATCATGGGTTCACCAATGGCACAGAATCTTATAA
AATCTGGATATGATGTGACAGTCTGGAATAGGACCAAGAGCAAATGCGATCCTCTTATCAACTTGGGTGCAAAGATTTATGCTAGGAAAATTGACCAGAGAAATTTTATC
CTCAGGATACATGATATGATC
Protein sequenceShow/hide protein sequence
MEVPHSLVSFQTRVLWRRSGGCNAVVLVVLFEKVPIPLKLEPKPLNDVVSGPLMAHQLAFPRQSNALSFHSFFCHYADRSRAVLSSNPSLSFFDDLRLVAQRKDINSNMS
NLGSSLPDATAAAGKLRVGFLGLGIMGSPMAQNLIKSGYDVTVWNRTKSKCDPLINLGAKIYARKIDQRNFILRIHDMI