; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi07G005980 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G005980
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionRibosomal protein L34
Genome locationchr07:6394791..6395675
RNA-Seq ExpressionLsi07G005980
SyntenyLsi07G005980
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR000271 - Ribosomal protein L34


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581832.1 hypothetical protein SDJN03_21834, partial [Cucurbita argyrosperma subsp. sororia]2.1e-3687.78Show/hide
Query:  MASKLLIRTGNSLINGLRLSSTHQKNRIWCNQALSHGHGVEVTPMLFPSVSKQETAHHLQQNDTESLRKLESEGIFFPFGLPSLRFFLPD
        MASKLLIRTGNSL+N LRLSSTHQ N IW +Q+LS GHGV+VTPMLFPSVSK +TAHHLQQNDTESLRKLESEGIFFPFGLPSLRFFLPD
Subjt:  MASKLLIRTGNSLINGLRLSSTHQKNRIWCNQALSHGHGVEVTPMLFPSVSKQETAHHLQQNDTESLRKLESEGIFFPFGLPSLRFFLPD
KAG7018271.1 hypothetical protein SDJN02_20139, partial [Cucurbita argyrosperma subsp. argyrosperma]2.1e-3687.78Show/hide
Query:  MASKLLIRTGNSLINGLRLSSTHQKNRIWCNQALSHGHGVEVTPMLFPSVSKQETAHHLQQNDTESLRKLESEGIFFPFGLPSLRFFLPD
        MASKLLIRTGNSL+N LRLSSTHQ N IW +Q+LS GHGV+VTPMLFPSVSK +TAHHLQQNDTESLRKLESEGIFFPFGLPSLRFFLPD
Subjt:  MASKLLIRTGNSLINGLRLSSTHQKNRIWCNQALSHGHGVEVTPMLFPSVSKQETAHHLQQNDTESLRKLESEGIFFPFGLPSLRFFLPD
XP_022955351.1 uncharacterized protein LOC111457406 isoform X1 [Cucurbita moschata]2.1e-3687.78Show/hide
Query:  MASKLLIRTGNSLINGLRLSSTHQKNRIWCNQALSHGHGVEVTPMLFPSVSKQETAHHLQQNDTESLRKLESEGIFFPFGLPSLRFFLPD
        MASKLLIRTGNSL+N LRLSSTHQ N IW +Q+LS GHGV+VTPMLFPSVSK +TAHHLQQNDTESLRKLESEGIFFPFGLPSLRFFLPD
Subjt:  MASKLLIRTGNSLINGLRLSSTHQKNRIWCNQALSHGHGVEVTPMLFPSVSKQETAHHLQQNDTESLRKLESEGIFFPFGLPSLRFFLPD
XP_022955352.1 uncharacterized protein LOC111457406 isoform X2 [Cucurbita moschata]2.1e-3687.78Show/hide
Query:  MASKLLIRTGNSLINGLRLSSTHQKNRIWCNQALSHGHGVEVTPMLFPSVSKQETAHHLQQNDTESLRKLESEGIFFPFGLPSLRFFLPD
        MASKLLIRTGNSL+N LRLSSTHQ N IW +Q+LS GHGV+VTPMLFPSVSK +TAHHLQQNDTESLRKLESEGIFFPFGLPSLRFFLPD
Subjt:  MASKLLIRTGNSLINGLRLSSTHQKNRIWCNQALSHGHGVEVTPMLFPSVSKQETAHHLQQNDTESLRKLESEGIFFPFGLPSLRFFLPD
XP_038904887.1 uncharacterized protein LOC120091114 isoform X1 [Benincasa hispida]2.1e-3690Show/hide
Query:  MASKLLIRTGNSLINGLRLSSTHQKNRIWCNQALSHGHGVEVTPMLFPSVSKQETAHHLQQNDTESLRKLESEGIFFPFGLPSLRFFLPD
        MASKLLIRTGNSLIN LRLSSTHQ +RI  NQALS+GHGVEVTPMLFPSVSK +TAHHLQQNDTESLRKLE EGIFFPFGLPSLRFFLPD
Subjt:  MASKLLIRTGNSLINGLRLSSTHQKNRIWCNQALSHGHGVEVTPMLFPSVSKQETAHHLQQNDTESLRKLESEGIFFPFGLPSLRFFLPD
TrEMBL top hitse value%identityAlignment
A0A0A0LIB6 Uncharacterized protein6.5e-3686.67Show/hide
Query:  MASKLLIRTGNSLINGLRLSSTHQKNRIWCNQALSHGHGVEVTPMLFPSVSKQETAHHLQQNDTESLRKLESEGIFFPFGLPSLRFFLPD
        MASKLLIRTG+SL+N LRLSS HQ NRIW +QALSHGHGVEVTPMLFPSVSK +TAH LQQNDTESLR+L+SEGIFFPFGLPSLRFFLPD
Subjt:  MASKLLIRTGNSLINGLRLSSTHQKNRIWCNQALSHGHGVEVTPMLFPSVSKQETAHHLQQNDTESLRKLESEGIFFPFGLPSLRFFLPD
A0A6J1GTJ1 uncharacterized protein LOC111457406 isoform X11.0e-3687.78Show/hide
Query:  MASKLLIRTGNSLINGLRLSSTHQKNRIWCNQALSHGHGVEVTPMLFPSVSKQETAHHLQQNDTESLRKLESEGIFFPFGLPSLRFFLPD
        MASKLLIRTGNSL+N LRLSSTHQ N IW +Q+LS GHGV+VTPMLFPSVSK +TAHHLQQNDTESLRKLESEGIFFPFGLPSLRFFLPD
Subjt:  MASKLLIRTGNSLINGLRLSSTHQKNRIWCNQALSHGHGVEVTPMLFPSVSKQETAHHLQQNDTESLRKLESEGIFFPFGLPSLRFFLPD
A0A6J1GTQ0 uncharacterized protein LOC111457406 isoform X21.0e-3687.78Show/hide
Query:  MASKLLIRTGNSLINGLRLSSTHQKNRIWCNQALSHGHGVEVTPMLFPSVSKQETAHHLQQNDTESLRKLESEGIFFPFGLPSLRFFLPD
        MASKLLIRTGNSL+N LRLSSTHQ N IW +Q+LS GHGV+VTPMLFPSVSK +TAHHLQQNDTESLRKLESEGIFFPFGLPSLRFFLPD
Subjt:  MASKLLIRTGNSLINGLRLSSTHQKNRIWCNQALSHGHGVEVTPMLFPSVSKQETAHHLQQNDTESLRKLESEGIFFPFGLPSLRFFLPD
A0A6J1IS44 uncharacterized protein LOC111480019 isoform X11.9e-3586.67Show/hide
Query:  MASKLLIRTGNSLINGLRLSSTHQKNRIWCNQALSHGHGVEVTPMLFPSVSKQETAHHLQQNDTESLRKLESEGIFFPFGLPSLRFFLPD
        MASKLLIRTGNSL+N LRLSST Q N IW +Q+LS GHGV+VTPMLFPSVSK +TAHHLQQNDTESLRKLESEGIFFPFGLPSLRFFLPD
Subjt:  MASKLLIRTGNSLINGLRLSSTHQKNRIWCNQALSHGHGVEVTPMLFPSVSKQETAHHLQQNDTESLRKLESEGIFFPFGLPSLRFFLPD
A0A6J1IXD9 uncharacterized protein LOC111480019 isoform X21.9e-3586.67Show/hide
Query:  MASKLLIRTGNSLINGLRLSSTHQKNRIWCNQALSHGHGVEVTPMLFPSVSKQETAHHLQQNDTESLRKLESEGIFFPFGLPSLRFFLPD
        MASKLLIRTGNSL+N LRLSST Q N IW +Q+LS GHGV+VTPMLFPSVSK +TAHHLQQNDTESLRKLESEGIFFPFGLPSLRFFLPD
Subjt:  MASKLLIRTGNSLINGLRLSSTHQKNRIWCNQALSHGHGVEVTPMLFPSVSKQETAHHLQQNDTESLRKLESEGIFFPFGLPSLRFFLPD
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G13882.1 Ribosomal protein L344.2e-1139.78Show/hide
Query:  MASKLLIRTGNSLINGLRLSSTHQ--KNRIWCNQALSHGHGVEVTPMLFPSVSKQETAHHLQQNDTESLRKLESEGIFFPFGLPSLRFFLPDV
        MA+K LIR+G SL+N      T    +N +  +       G E+ P  FPS+S  +++   + NDT SL++L   G  +P GLPSL FFLP+V
Subjt:  MASKLLIRTGNSLINGLRLSSTHQ--KNRIWCNQALSHGHGVEVTPMLFPSVSKQETAHHLQQNDTESLRKLESEGIFFPFGLPSLRFFLPDV
AT3G13882.2 Ribosomal protein L343.3e-0847.17Show/hide
Query:  GVEVTPMLFPSVSKQETAHHLQQNDTESLRKLESEGIFFPFGLPSLRFFLPDV
        G E+ P  FPS+S  +++   + NDT SL++L   G  +P GLPSL FFLP+V
Subjt:  GVEVTPMLFPSVSKQETAHHLQQNDTESLRKLESEGIFFPFGLPSLRFFLPDV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCCAAACTTCTGATTCGAACGGGAAATTCTTTGATCAATGGATTGAGATTAAGTTCAACGCATCAGAAAAACAGGATTTGGTGTAACCAAGCTCTGTCCCATGG
CCATGGCGTTGAAGTCACTCCCATGCTTTTTCCTTCAGTCTCTAAGCAGGAGACTGCTCATCATTTGCAGCAGAATGATACCGAATCGTTGAGGAAGCTTGAATCGGAAG
GCATTTTCTTTCCTTTTGGGCTTCCGTCTCTCCGGTTCTTCTTGCCCGATGTAAAGATACTTGCCTGCCAGCGTCTACCCTTTACTGTGATAATGCTGAGGGGTATCTAT
CTACTTATTCTGTAA
mRNA sequenceShow/hide mRNA sequence
CACCCCTCTTCTTTTTCTTCGATTTCTCCTTCTCCCACCTTTGACACGGCCGCACACCGCCGGTAACCCACCGGAAACTTTCTTTCTTTTCCCTCGCTCTCCTCCGGCAG
CCACACCAACCTTACCTTTTGCCGCACACTGTCACCAACCTCACCGCCACGCCCATCTTTGATTTCTAAGGGTTAGTAAGCTCATTCTTTTGCTAATGGCGTCCAAACTT
CTGATTCGAACGGGAAATTCTTTGATCAATGGATTGAGATTAAGTTCAACGCATCAGAAAAACAGGATTTGGTGTAACCAAGCTCTGTCCCATGGCCATGGCGTTGAAGT
CACTCCCATGCTTTTTCCTTCAGTCTCTAAGCAGGAGACTGCTCATCATTTGCAGCAGAATGATACCGAATCGTTGAGGAAGCTTGAATCGGAAGGCATTTTCTTTCCTT
TTGGGCTTCCGTCTCTCCGGTTCTTCTTGCCCGATGTAAAGATACTTGCCTGCCAGCGTCTACCCTTTACTGTGATAATGCTGAGGGGTATCTATCTACTTATTCTGTAA
Protein sequenceShow/hide protein sequence
MASKLLIRTGNSLINGLRLSSTHQKNRIWCNQALSHGHGVEVTPMLFPSVSKQETAHHLQQNDTESLRKLESEGIFFPFGLPSLRFFLPDVKILACQRLPFTVIMLRGIY
LLIL